TCONS_00025075 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025075
Unique NameTCONS_00025075
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025075 ID=TCONS_00025075|Name=TCONS_00025075|organism=Clytia hemisphaerica|type=transcript|length=179bp
TTCATAACTTCTAGCGTTTAACGTTTTTATATTTGTTCGATTTATACCAG
GTGTCCCAAAAAACACTTTACATGTCAAGGATAATATTATGACGTATTTT
TGTTGAAACCTTTCGACATTTTTGGGGTTTGTCAAGATTCATATTTATAT
CTTTGTGCGAAAATTCAGGTAAATTTGAT
Run BLAST on NCBI

transcript from alignment at sc0000520:43652..43830

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025075 ID=TCONS_00025075|Name=TCONS_00025075|organism=Clytia hemisphaerica|type=transcript|length=179bp|location=Sequence derived from alignment at sc0000520:43652..43830 (Clytia hemisphaerica)
ATCAAATTTACCTGAATTTTCGCACAAAGATATAAATATGAATCTTGACA
AACCCCAAAAATGTCGAAAGGTTTCAACAAAAATACGTCATAATATTATC
CTTGACATGTAAAGTGTTTTTTGGGACACCTGGTATAAATCGAACAAATA
TAAAAACGTTAAACGCTAGAAGTTATGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014095XLOC_014095Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025075-exon-sc0000520-1491911889:43652..43830TCONS_00025075-exon-sc0000520-1491911889:43652..43830Clytia hemisphaericaexon
TCONS_00025075-exon-sc0000520-1510915933:43652..43830TCONS_00025075-exon-sc0000520-1510915933:43652..43830Clytia hemisphaericaexon
TCONS_00025075-exon-sc0000520-1575043694:43652..43830TCONS_00025075-exon-sc0000520-1575043694:43652..43830Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000520supercontigsc0000520:43652..43830 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025075 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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