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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025046 ID=TCONS_00025046|Name=TCONS_00025046|organism=Clytia hemisphaerica|type=transcript|length=1398bp
ACCACGACCCAGTTGGCCTCGTTCTCAAATCGAATGTTTCTACTAGAGAC
GCACATGTAATCAAACATGGGGCGCTAAAATGTAAACATCGGAATttctc
aaaacattttttttctcagttcGGTCTACCTCGAAGTAAAGCAGACGTAC
TTTTGACAGCCTTTCTTGGACTGATTTGAGGAGgagaaaaaatggcaaaa
agatATGAGCCGAAAGGTTCTCTTTCGCTTCGGTCAGATCATATGGACTA
TGGAAGAGCTACACTCGTTTCAAACTGgCACAAGGCAAGAGAAGCTGAAC
CAAAAGATCACGATGTCCATGGGtctaaaaaatttaattctaaaaataga
aaattacaCCAGTCAACATATGATCGAATATTGAATATCACTGATGGCAC
ATTGCCATCATCTACCATGCACGATTACATGAATCAAATCAATTTACGAA
AAGATTTTCAAGAGCGAAAAACAAAGCAATCAATGATCGACATGTCAACA
TTTCATCATGCAGAAAAGACAAGGCTTGCACATGCACCCGAAAGAGGTTT
TGGTAGTATTTTACCAAGACACCCACACGATCATGATAAAAGATACCTTG
ACACAACGTACGGAGTTGATTACCGCGATACATATCCTTACGTAGATACA
AATCAAGCTTCTCCATTACCTGAAAAAGATCTCTCTCCAGCGTACAAAAA
ATGTCATTCACAATTCACTGATGTCGATGATTATAGACGTCATGGTCGAA
ACACGTGGCAAAATGATTGCGGCGTGTACGCTAATAGTGAACTCAAAAAG
GAGGTTTTCAAACCCACCGACACAATACCTGAACGTCTTTTATAGAAGGT
AGTGCTTTTACATTGTTTTCTATATTTTAGTAATATTTAAATTACCTAAA
TCTGTAACTTTTCAATGGATAACCAGTCAAAAGACAGAAAATTTATTTCC
CTATTTGACTTCAAATCAGtctttggaaatatagaaaacaTCAAGGAAAC
AAACTTTTGACTTATAATATCTTGACtttatcaaatcaaattgtTTGAAA
CCTTATTTTGAATGAAGTACACGACGGTGCATTTGATAACGGAATAGTCT
TATTGGTATTAGATTTTTATAATTTACCTTTATTTCTCGGTTTTAAATGA
CCATCAGATTACTTTGAGAACCCACACTTAAGCATCCAATGTTGTTATAA
TTTCCCTTAATATCATTTTAAACTCTATTCCGTTTTCCATGCACTGCAAA
CTTGTCTAGTTATCCCCTGCGCTGATTTAtgtaattttcttaatttcttg
catagatttttaaattgtgtaTCCGAAATAATTTATATACGAAATATAAT
ATCTACATTTTATAAACAATTTGATGTCATCTTTTTCCTTCATTTTCG Run BLAST on NCBI protein sequence of TCONS_00025046-protein >TCONS_00025046-protein ID=TCONS_00025046-protein|Name=TCONS_00025046-protein|organism=Clytia hemisphaerica|type=polypeptide|length=217bp
MAKRYEPKGSLSLRSDHMDYGRATLVSNWHKAREAEPKDHDVHGSKKFNS
KNRKLHQSTYDRILNITDGTLPSSTMHDYMNQINLRKDFQERKTKQSMID
MSTFHHAEKTRLAHAPERGFGSILPRHPHDHDKRYLDTTYGVDYRDTYPY
VDTNQASPLPEKDLSPAYKKCHSQFTDVDDYRRHGRNTWQNDCGVYANSE
LKKEVFKPTDTIPERLL Run BLAST on NCBI transcript from alignment at sc0000517:118313..123737- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025046 ID=TCONS_00025046|Name=TCONS_00025046|organism=Clytia hemisphaerica|type=transcript|length=5425bp|location=Sequence derived from alignment at sc0000517:118313..123737- (Clytia hemisphaerica)
ACCACGACCCAGTTGGCCTCGTTCTCAAATCGAATGTTTCTACTAGAGAC
GCACATGTAATCAAACATGGGGCGCTAAAATGTAAACATCGGAATTTCTC
AAAACATTTTTTTTCTCAGTTCGGTCTACCTCGAAGTAAAGCAGACGTAC
TTTTGACAGCCTTTCTTGGACTGATTTGAGGAGGAGAAAAAATGGCAAAA
AGATATGAGCCGAAAGGTTCTCTTTCGCTTCGGTCAGATCATATGGACTA
TGGAAGAGCTACACTCGTTTCAAACTGGTAATTTAAGTTTAAACTGTTGA
TTTAACAACTTAACTTTATCTTCCTTTGTTTTCAGAAGCATTCGGCGAGC
CATTTTTAGGAAATATCTGCTGTTCCTTTGCTGGGGGGTTTGTAGGGGTT
CGAAATACCGTTTTCCCGTCAAAATTTTTGCTGAATCCCGAAATCCCGAA
AATTGAAAAAAATAATAACACCGTCACACCGGTTTGTACATATGGCGCGC
CAAAAGGCTTTTTAATACTAACTTTTTTTTATAATACCAACTTTTTTTTA
TAATACCAACTTTTTTTTATAATATCAACTTTTCTTTATAATATCAACTT
TTTTTTTATAATACCAACTTTTTTTTTATAATACCAACTTTTTTTTAATA
ATACCAACTTTTTTTTAATAATACCAACTTTTTTTTTATAGTACCAACTT
TTTTTTTAGTTTTTATAACAACAATTTTTGTCTCGCTTACTATGCGTGTA
TAATCGATCAAGTGTAGAAAGAGTCTTAGCGCGATTACACCTAGCCTGGA
GACCACTTAAGCTTTTTTGATAGACTGGATGATGCCATTTCACAGTCGCA
AAGCGTAATGGGTAATCAGGGCCACTGCGCGCTGATGACGACTTATTATT
GGTCCAAAGTTTTGAAAAAATTTAAAGATTTTTGTGTCTAGCCAACCGGA
AGTCGTTACTAGATACATAGATCAAAACGCTACCAACAGCTGGAAACAAA
TTAAACCTTTAACCAACCAACACAAATGACCAAACAACACAAATGATAAA
AATAAGCTGAACTACCAGCAGTCTTTGGACTTTTACCCAAGCAGCCAACA
GCCAAGTCAAGGACAGGACATCCATGACCATGTGCCTCATGTAGATTTTC
CAGTGAAGAACTGTAAAGGCCCGTCTACATGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNATGATTAGCTCGCATTCTCGCGCGGGCGAATAAAGATGAGGCGGCAAT
CTTGCACTGAGGGTGCTACTTAGTTTCCGCCCTTTTTGCGCCCACGATAG
AATGGTCCAAGCACGGGGGTATTCCAAATGATAAACGATGTCGTTCTGTA
AGTGTTTATTTTCTGATAGATACAAATAGTGTATTGAATATTATCACTTA
TTTATTTAAATATTTTTGAGCCCAAATTTAAATATCTGGTTAAATAAAAA
ACAAATGACAGCAAGTCTGTTTTTTTTCAAACCCCCGGGAAAAGTTTTTT
TGCCGACTTAGCTATTTTACAAATTTCGGAAAAGAACTCCCATAGGAATT
CCGATTCATAACCGGATTGGTTCATTTCAGAACGGCTTCAAGAAAGTCAT
AATGGCAGATAATTTTAAAAGTTTCTCTGAGTAAATGTGTGTAATTTATC
GATGTTGATGGCTTGTTGATTCTTTAAAGAAAAAAGATAACAGGTATAGC
TTTTTCTAATCCTGGAATATCGAGGTTCCAGCTACACTGAAAAAGGGCCA
ACCCCGTCACATCGTAAAAGTACAACCCCCCCCCCTTTGCTAGGAGATGT
TTTTTTTTATGAAAAATTGAACAGCAGGTCTCATTTTCTAGGAGGGTCAA
TTTACTTCAAAACATCTGTTGTTCTATTACAGGAGATACGGTCATCAGTG
ATCAGCAGAAAGCATTTTCTAGGTATAATGACGTTATCGGTGAACAGCAG
ATAGGTTTTTCTAGGCAATAACTTTATAATGAATATTTATAATTATAAAC
CCATGAACACAGATCAATTTTTTGAGACAGGGATATAAACCCAAGAACAG
CAGATCAAATCTTTTGAGATAGTAAGACAGGTGTGCAGACAAAGAACAGC
AGATCAAATTTTCTATGGGACAGGGTACAAAACTAGGGTCTCAGGAATCG
AAGAACAGCAGATGTGAATTTCTAGAAGTAGGATTTTTCCAGCATTGAGA
ACAGCAGATCAAAATTTCTAGGTTGAATATACGTGAACAGCAGATATTCA
AAAAAAGGTCGTCACTGGATGCTTGTGTGTTTTCTTTGTCCCTTACATCT
TTTGCAGCAACTAGATATGATTTAAACTATATTTAAACTACTCTGGTCTC
TGGTGATCAACGATGACTTATTTGAAGCACTAACTAATCCCTTTTTTCTT
CTTCAAGGCACAAGGCAAGAGAAGCTGAACCAAAAGATCACGATGTCCAT
GGGTCTAAAAAATTTAATTCTAAAAATAGAAAATTACACCAGTCAACATA
TGATCGAATATTGAATATCACTGATGGCGTAAGTATATTTAAATGTTGCC
AAAATTTTAAGATATTAGCCTAGCCAGCTGTTTTCTATCAACTTGATCAT
TCGAGATGTGGTTCCTGCTAAAAACAAAAAAAACTTGTTAGGAAGGGCTC
CAGCAGTTCATATCAATTCTTTTGTGTAGCGATGTGATTCCAAAATTTTT
TGGATAGATTTTGTGATCAAGATTTTGGCGTGATTTTTATTCATTTTTTG
AGTATAATAATTAAGAAGCAAAAATTTGAGACATAACCATATGTGTGATT
TATGCTATTTATGGGCAGTTTGTGTGCTCTTATAATTTGTAAAACATGAA
TATCTGAGCTTTGGAATATACAGTAGATTTGATACTTGATTTGAAGGTTT
TGCTTGGGGCAATTTAAGGAATCAGTGGTCAAAAGATCTTTCACCATTTT
GATGCATTGTATCCATAAATTCTGATTATTTTATAGGAGAGGAATTTCTA
GGCCAGCCATGCTAGATTCAGTATATATCTCTAATATTATGTTAGGGTCA
ACCCATCTGCAGATTCTTGGTTGCTTTGAAAGTTTAAGATAAAATGTTAT
TCTTTTCTTGCCTTTTTAAGACATTGCCATCATCTACCATGCACGATTAC
ATGAATCAAATCAATTTACGAAAAGATTTTCAAGAGCGAAAAACAAAGCA
ATCAATGATCGACATGTCAACATTTCATCATGCAGAAAAGACAAGGTATT
ACAGTAACCCAACTCTAAGATCTTCAAGGGACTAATATTTTTCTTCAAAT
TAGAGAAAAATCCGAATTATAGAGAGTATTTTAAACTATTGAGGGGCAAT
GTTTTAGTTCGAATTACAGAAAGATTCTAATTATAGATAATTTCATGCAG
AAAAGACAAGGTATTACAGTAACCCAACTCTAAGATCTTCAAGGGACTAA
TATTTTTCTTCAAATTAGAGAAAAATCCGAATTATAGAGAGTATTTTAAA
CTATTGAGGGGGCAATGTTTTAGTTCGAATTATTCGAAAGATTCTAATTA
TAGAGTTGACTATGTATTACTCATCATCTAGCATTCAAAAACAGAATTTC
TAGAGCTTCTTTCAAGTAGATTTTTAAGATGAAGATGTCTCCCAATGATA
TTTTATTCACTTTTTAATCAATATCAGCTTTATTTTGTTGAACCTGGTTA
AAACTTATTTTTCTTGTGAATATACAGTACTTAAATTGTTTTAGGCTTGC
ACATGCACCCGAAAGAGGTTTTGGTAGTATTTTACCAAGACACCCACACG
ATCATGATAAAAGGTAAAAATGACCTACATTTCGTTCCCTTTTGAAAATG
AGAATTTGTGAAATAAAACTTCAACGACTTTATAGTAGGCTTATGGTTGG
AAACGAATAACGCGTCGGTTTATTTTTGCATTAACGTTTTGAAATACTCT
AGATTTTATTTCATGACCGCAATCTCACCTTTTTAATTATTATTATATGA
TTTAATTTTCTTTGTCTAGATACCTTGACACAACGTACGGAGTTGATTAC
CGCGATACATATCCTTACGTAGATACAAATCAAGCTTCTCCATTACCTGA
AAAAGATCTCTCTCCAGCGTACAAAAAATGTCATTCACAATTCACTGATG
TCGATGATTATAGACGTCATGGTCGAAACACGTGGCAAAATGATTGCGGC
GTGTACGCTAATAGTGAACTCAAAAAGGAGGTTTTCAAACCCACCGACAC
AATACCTGAACGTCTTTTATAGAAGGTAGTGCTTTTACATTGTTTTCTAT
ATTTTAGTAATATTTAAATTACCTAAATCTGTAACTTTTCAATGGATAAC
CAGTCAAAAGACAGAAAATTTATTTCCCTATTTGACTTCAAATCAGTCTT
TGGAAATATAGAAAACATCAAGGAAACAAACTTTTGACTTATAATATCTT
GACTTTATCAAATCAAATTGTTTGAAACCTTATTTTGAATGAAGTACACG
ACGGTGCATTTGATAACGGAATAGTCTTATTGGTATTAGATTTTTATAAT
TTACCTTTATTTCTCGGTTTTAAATGACCATCAGATTACTTTGAGAACCC
ACACTTAAGCATCCAATGTTGTTATAATTTCCCTTAATATCATTTTAAAC
TCTATTCCGTTTTCCATGCACTGCAAACTTGTCTAGTTATCCCCTGCGCT
GATTTATGTAATTTTCTTAATTTCTTGCATAGATTTTTAAATTGTGTATC
CGAAATAATTTATATACGAAATATAATATCTACATTTTATAAACAATTTG
ATGTCATCTTTTTCCTTCATTTTCG Coding sequence (CDS) from alignment at sc0000517:118313..123737- >TCONS_00025046 ID=TCONS_00025046|Name=TCONS_00025046|organism=Clytia hemisphaerica|type=CDS|length=3270bp|location=Sequence derived from alignment at sc0000517:118313..123737- (Clytia hemisphaerica)
ATACCTTGACACAACGTACGGAGTTGATTACCGCGATACATATCCTTACG
TAGATACAAATCAAGCTTCTCCATTACCTGAAAAAGATCTCTCTCCAGCG
TACAAAAAATGTCATTCACAATTCACTGATGTCGATGATTATAGACGTCA
TGGTCGAAACACGTGGCAAAATGATTGCGGCGTGTACGCTAATAGTGAAC
TCAAAAAGGAGGTTTTCAAACCCACCGACACAATACCTGAACGTCTTTTA
TAGGCTTGCACATGCACCCGAAAGAGGTTTTGGTAGTATTTTACCAAGAC
ACCCACACGATCATGATAAAAGACATTGCCATCATCTACCATGCACGATT
ACATGAATCAAATCAATTTACGAAAAGATTTTCAAGAGCGAAAAACAAAG
CAATCAATGATCGACATGTCAACATTTCATCATGCAGAAAAGACAAGGCA
CAAGGCAAGAGAAGCTGAACCAAAAGATCACGATGTCCATGGGTCTAAAA
AATTTAATTCTAAAAATAGAAAATTACACCAGTCAACATATGATCGAATA
TTGAATATCACTGATGGCATGGCAAAAAGATATGAGCCGAAAGGTTCTCT
TTCGCTTCGGTCAGATCATATGGACTATGGAAGAGCTACACTCGTTTCAA
ACTGATACCTTGACACAACGTACGGAGTTGATTACCGCGATACATATCCT
TACGTAGATACAAATCAAGCTTCTCCATTACCTGAAAAAGATCTCTCTCC
AGCGTACAAAAAATGTCATTCACAATTCACTGATGTCGATGATTATAGAC
GTCATGGTCGAAACACGTGGCAAAATGATTGCGGCGTGTACGCTAATAGT
GAACTCAAAAAGGAGGTTTTCAAACCCACCGACACAATACCTGAACGTCT
TTTATAGGCTTGCACATGCACCCGAAAGAGGTTTTGGTAGTATTTTACCA
AGACACCCACACGATCATGATAAAAGACATTGCCATCATCTACCATGCAC
GATTACATGAATCAAATCAATTTACGAAAAGATTTTCAAGAGCGAAAAAC
AAAGCAATCAATGATCGACATGTCAACATTTCATCATGCAGAAAAGACAA
GGCACAAGGCAAGAGAAGCTGAACCAAAAGATCACGATGTCCATGGGTCT
AAAAAATTTAATTCTAAAAATAGAAAATTACACCAGTCAACATATGATCG
AATATTGAATATCACTGATGGCATGGCAAAAAGATATGAGCCGAAAGGTT
CTCTTTCGCTTCGGTCAGATCATATGGACTATGGAAGAGCTACACTCGTT
TCAAACTGATACCTTGACACAACGTACGGAGTTGATTACCGCGATACATA
TCCTTACGTAGATACAAATCAAGCTTCTCCATTACCTGAAAAAGATCTCT
CTCCAGCGTACAAAAAATGTCATTCACAATTCACTGATGTCGATGATTAT
AGACGTCATGGTCGAAACACGTGGCAAAATGATTGCGGCGTGTACGCTAA
TAGTGAACTCAAAAAGGAGGTTTTCAAACCCACCGACACAATACCTGAAC
GTCTTTTATAGGCTTGCACATGCACCCGAAAGAGGTTTTGGTAGTATTTT
ACCAAGACACCCACACGATCATGATAAAAGACATTGCCATCATCTACCAT
GCACGATTACATGAATCAAATCAATTTACGAAAAGATTTTCAAGAGCGAA
AAACAAAGCAATCAATGATCGACATGTCAACATTTCATCATGCAGAAAAG
ACAAGGCACAAGGCAAGAGAAGCTGAACCAAAAGATCACGATGTCCATGG
GTCTAAAAAATTTAATTCTAAAAATAGAAAATTACACCAGTCAACATATG
ATCGAATATTGAATATCACTGATGGCATGGCAAAAAGATATGAGCCGAAA
GGTTCTCTTTCGCTTCGGTCAGATCATATGGACTATGGAAGAGCTACACT
CGTTTCAAACTGATACCTTGACACAACGTACGGAGTTGATTACCGCGATA
CATATCCTTACGTAGATACAAATCAAGCTTCTCCATTACCTGAAAAAGAT
CTCTCTCCAGCGTACAAAAAATGTCATTCACAATTCACTGATGTCGATGA
TTATAGACGTCATGGTCGAAACACGTGGCAAAATGATTGCGGCGTGTACG
CTAATAGTGAACTCAAAAAGGAGGTTTTCAAACCCACCGACACAATACCT
GAACGTCTTTTATAGGCTTGCACATGCACCCGAAAGAGGTTTTGGTAGTA
TTTTACCAAGACACCCACACGATCATGATAAAAGACATTGCCATCATCTA
CCATGCACGATTACATGAATCAAATCAATTTACGAAAAGATTTTCAAGAG
CGAAAAACAAAGCAATCAATGATCGACATGTCAACATTTCATCATGCAGA
AAAGACAAGGCACAAGGCAAGAGAAGCTGAACCAAAAGATCACGATGTCC
ATGGGTCTAAAAAATTTAATTCTAAAAATAGAAAATTACACCAGTCAACA
TATGATCGAATATTGAATATCACTGATGGCATGGCAAAAAGATATGAGCC
GAAAGGTTCTCTTTCGCTTCGGTCAGATCATATGGACTATGGAAGAGCTA
CACTCGTTTCAAACTGATACCTTGACACAACGTACGGAGTTGATTACCGC
GATACATATCCTTACGTAGATACAAATCAAGCTTCTCCATTACCTGAAAA
AGATCTCTCTCCAGCGTACAAAAAATGTCATTCACAATTCACTGATGTCG
ATGATTATAGACGTCATGGTCGAAACACGTGGCAAAATGATTGCGGCGTG
TACGCTAATAGTGAACTCAAAAAGGAGGTTTTCAAACCCACCGACACAAT
ACCTGAACGTCTTTTATAGGCTTGCACATGCACCCGAAAGAGGTTTTGGT
AGTATTTTACCAAGACACCCACACGATCATGATAAAAGACATTGCCATCA
TCTACCATGCACGATTACATGAATCAAATCAATTTACGAAAAGATTTTCA
AGAGCGAAAAACAAAGCAATCAATGATCGACATGTCAACATTTCATCATG
CAGAAAAGACAAGGCACAAGGCAAGAGAAGCTGAACCAAAAGATCACGAT
GTCCATGGGTCTAAAAAATTTAATTCTAAAAATAGAAAATTACACCAGTC
AACATATGATCGAATATTGAATATCACTGATGGCATGGCAAAAAGATATG
AGCCGAAAGGTTCTCTTTCGCTTCGGTCAGATCATATGGACTATGGAAGA
GCTACACTCGTTTCAAACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025046-exon-sc0000517-1575043694:123461..123737 | TCONS_00025046-exon-sc0000517-1575043694:123461..123737 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1575043694:120610..120730 | TCONS_00025046-exon-sc0000517-1575043694:120610..120730 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1575043694:119893..120017 | TCONS_00025046-exon-sc0000517-1575043694:119893..120017 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1575043694:119325..119393 | TCONS_00025046-exon-sc0000517-1575043694:119325..119393 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1575043694:118313..119118 | TCONS_00025046-exon-sc0000517-1575043694:118313..119118 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1510915933:123461..123737 | TCONS_00025046-exon-sc0000517-1510915933:123461..123737 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1510915933:120610..120730 | TCONS_00025046-exon-sc0000517-1510915933:120610..120730 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1510915933:119893..120017 | TCONS_00025046-exon-sc0000517-1510915933:119893..120017 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1510915933:119325..119393 | TCONS_00025046-exon-sc0000517-1510915933:119325..119393 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1510915933:118313..119118 | TCONS_00025046-exon-sc0000517-1510915933:118313..119118 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1491911889:123461..123737 | TCONS_00025046-exon-sc0000517-1491911889:123461..123737 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1491911889:120610..120730 | TCONS_00025046-exon-sc0000517-1491911889:120610..120730 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1491911889:119893..120017 | TCONS_00025046-exon-sc0000517-1491911889:119893..120017 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1491911889:119325..119393 | TCONS_00025046-exon-sc0000517-1491911889:119325..119393 | Clytia hemisphaerica | exon |
| TCONS_00025046-exon-sc0000517-1491911889:118313..119118 | TCONS_00025046-exon-sc0000517-1491911889:118313..119118 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000517 | supercontig | sc0000517:118313..123737 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR027905 | DUF4572 |
Blast
BLAST of TCONS_00025046 vs. Swiss-Prot (Human)
Match: CI135 (Protein C9orf135 OS=Homo sapiens GN=C9orf135 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.297e-35 Identity = 78/204 (38.24%), Postives = 118/204 (57.84%), Query Frame = 3
Query: 207 EPKGSLSLRSDHMDYGRATLVSNWHKAREAEPKDHDVHGSKKFNSKNRKLHQSTYDRILNITDGTLPSSTMHDYMNQINLRKDFQERKTKQSMIDMSTFHHAEKTRLAHAPERGFGSILPRHPHDHDKRYLDTTYGVDYRDTYPYVDTNQASPLPEKDLSPAYKKCHSQFTDVDDYRRHGRNTWQNDCGVYANSELKKEVFKPT 818
E KGSL+LRS H Y + LV +WH+ REA PK +D+ G +K +KL STY R L + + +S H+ ++Q+ L ++ E K+K ++++ T R+ P GFG++ PRHP D K TTY DY Y Y A P + D S ++KC SQFTD++ +R G NTW ++ G+YANS++K++++ T
Sbjct: 28 ERKGSLTLRSHHKKYSKPVLVYSWHRDREAFPKGYDIEGPEKV----KKLCNSTYRR-LGTDESPIWTSETHEKLSQMCLNTEWVEMKSK-ALLNEETVSSGIIERVTGLPATGFGAVFPRHPPDWSKMCALTTYSEDYVPPYDY--QPHAYPC-QDDYSIVHRKCRSQFTDLNGSKRFGINTWHDESGIYANSDVKQKLYPLT 222
The following BLAST results are available for this feature:
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