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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025028 ID=TCONS_00025028|Name=TCONS_00025028|organism=Clytia hemisphaerica|type=transcript|length=1494bp
tttttttctttcatcacaccattgtttttcttttatcatttgaTAATATC
TTCGCTGGTTATTTCATAGGAGGCAGACTCTGTGACGGCAGTATCTTTCA
AGCCGATGAACAACCATGACGAAGCTCCTCCCAATCCAACCATCGAAGTG
GAAATCAGCTAGAAATCACGCTATAAACTGACGTAGATGACGAAATTATA
AATTTCGAGTATGGTGCACAATTCGGTATGAATTACTTAGAGCTGTACGA
ACCAAGTTGGTCGAGAACCTGTGATAGGTGTTGGCAAATCAAACTAgagg
aaaataatgaattaaaactttttttaaaagtgacGTAGATAACATAAAGG
AAAATATTATCTGAGCTACATTTTCAAAGAGCGCGCGTAGAAAGGTCGCG
CGGAGCCGTCCCGCGTGCACTACCAGATAACAAGACTATTCAATGGAATT
GGTATGCTAAACTTACACTTAGGTATGTAtgataatttaaaattttattt
caaggtattattttttttggcttttgttttgttattattttttatttttt
gctttttagaatttttaagtCTCCTTTTAGTattattttaaatattatat
tacTATACGAGGAAAGATTATTAATTTTATGCCCCTCCCCTGTCTCTGGT
TTTgcctgaatattttttttctaatttgaagGGGTATTAATGTCCGaata
ttaaatttttgtttttttgtgtatAGTTAGCTTTCGGACAGTTTAATTAA
TGTGTAGTATTTTGTCTTCTATTAGGTGATTAAACacttaacttttattt
tctaatttGCAAGCTTATAACAACACAAGTGCACTTTGCAATTGTATTTT
TAGCCGGATGGTCGTATTCGATAAAATCGATATATTAAAATATCAATCCt
cttaatttttgaaacttAATGAAAATCACAGAATTCGTGATGAACAATTT
TATTGATTACAACTGCCATTTTCCAATGGTAAGCCTTTTTTCGTGTGAGT
ATTCAAAGTTGCAAAATGCCATAACCCTAGACTTCGTATTTAGAGTAAAA
AAAATGCCGACGTAATATAGTTTGTTTGCTTCTAAGCTGCCACACAACAT
TGAAACAACTTTCATctaacgttgttttgacgttgcgtGTCAGCTCGGAT
AACATAAGGCGCTTTTGTTGAGCATCgtgcaaaatgaaaaaatcactgAA
TtagatattcatgatatgctcAATCAGTCTATTTTATGGGAACCACGAAT
TTAGGACAAACTTTGAATATTCTAGAAAAGTCGTTCTTGGCTTAACACGT
ATCTTGAATATTATATTAGATAAATATTGAAaggtaaagaaattttattt
tttaaataatgatgATATTATCGTACTGTAGTATTATTAAGTacttatta
ttattttaactaTCTTGTAACATGGACAGAAAATCTTTATATGGTGTATA
TAATAAGTTTGCTTTCAAAACATATTAATCTACTTTTAGCTCAA Run BLAST on NCBI transcript from alignment at sc0000515:103811..105304 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025028 ID=TCONS_00025028|Name=TCONS_00025028|organism=Clytia hemisphaerica|type=transcript|length=1494bp|location=Sequence derived from alignment at sc0000515:103811..105304 (Clytia hemisphaerica)
TTGAGCTAAAAGTAGATTAATATGTTTTGAAAGCAAACTTATTATATACA
CCATATAAAGATTTTCTGTCCATGTTACAAGAtagttaaaataataataa
gtACTTAATAATACTACAGTACGATAATATcatcattatttaaaaaataa
aatttctttacctTTCAATATTTATCTAATATAATATTCAAGATACGTGT
TAAGCCAAGAACGACTTTTCTAGAATATTCAAAGTTTGTCCTAAATTCGT
GGTTCCCATAAAATAGACTGATTgagcatatcatgaatatctaATTcagt
gattttttcattttgcacGATGCTCAACAAAAGCGCCTTATGTTATCCGA
GCTGACacgcaacgtcaaaacaacgttagATGAAAGTTGTTTCAATGTTG
TGTGGCAGCTTAGAAGCAAACAAACTATATTACGTCGGCATTTTTTTTAC
TCTAAATACGAAGTCTAGGGTTATGGCATTTTGCAACTTTGAATACTCAC
ACGAAAAAAGGCTTACCATTGGAAAATGGCAGTTGTAATCAATAAAATTG
TTCATCACGAATTCTGTGATTTTCATTaagtttcaaaaattaagaGGATT
GATATTTTAATATATCGATTTTATCGAATACGACCATCCGGCTAAAAATA
CAATTGCAAAGTGCACTTGTGTTGTTATAAGCTTGCaaattagaaaataa
aagttaagtGTTTAATCACCTAATAGAAGACAAAATACTACACATTAATT
AAACTGTCCGAAAGCTAACTatacacaaaaaaacaaaaatttaatattCG
GACATTAATACCCcttcaaattagaaaaaaaatattcaggcAAAACCAGA
GACAGGGGAGGGGCATAAAATTAATAATCTTTCCTCGTATAgtaatataa
tatttaaaataatACTAAAAGGAGacttaaaaattctaaaaagcaaaaaa
taaaaaataataacaaaacaaaagccaaaaaaaataataccttgaaataa
aattttaaattatcaTACATACCTAAGTGTAAGTTTAGCATACCAATTCC
ATTGAATAGTCTTGTTATCTGGTAGTGCACGCGGGACGGCTCCGCGCGAC
CTTTCTACGCGCGCTCTTTGAAAATGTAGCTCAGATAATATTTTCCTTTA
TGTTATCTACgtcacttttaaaaaaagttttaattcattattttcctcTA
GTTTGATTTGCCAACACCTATCACAGGTTCTCGACCAACTTGGTTCGTAC
AGCTCTAAGTAATTCATACCGAATTGTGCACCATACTCGAAATTTATAAT
TTCGTCATCTACGTCAGTTTATAGCGTGATTTCTAGCTGATTTCCACTTC
GATGGTTGGATTGGGAGGAGCTTCGTCATGGTTGTTCATCGGCTTGAAAG
ATACTGCCGTCACAGAGTCTGCCTCCTATGAAATAACCAGCGAAGATATT
Atcaaatgataaaagaaaaacaatggtgtgatgaaagaaaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025028-exon-sc0000515-1491911889:103811..105304 | TCONS_00025028-exon-sc0000515-1491911889:103811..105304 | Clytia hemisphaerica | exon |
| TCONS_00025028-exon-sc0000515-1510915933:103811..105304 | TCONS_00025028-exon-sc0000515-1510915933:103811..105304 | Clytia hemisphaerica | exon |
| TCONS_00025028-exon-sc0000515-1575043694:103811..105304 | TCONS_00025028-exon-sc0000515-1575043694:103811..105304 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000515 | supercontig | sc0000515:103811..105304 . |
Blast
The following BLAST results are available for this feature:
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