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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024965 ID=TCONS_00024965|Name=TCONS_00024965|organism=Clytia hemisphaerica|type=transcript|length=747bp
ACAATGCTAAGGCCAGTGAACTGGGTagacaaaaaaagtttttcaaaaac
tttttggaagCCAATAAAAACTCAAAGAAGTTTGGTTACcttatttcaat
caatttacGAGACGAAGACCAACCAATCATGGTTCAAGCATTATCCCTGA
TGTACGTCAAATAGGAAAACCTAAAGTGACCTTTGTATCTTACGaccatt
tcaaaatttcagtcaCAAAGCCAAACAATACATGGGTGACTCATTTCTTG
GTGGAATACTGGCCAATCATCGATGACAGCGAAGAAACTAGGCTTACGTT
TGCTTTCAGTCATCAAAATACACGAAACGTCACCATCACTAACTTAAACC
ATTTGACTACATACGAATTCCGTATCGTCCATGTGATAGAATTTGGTATT
TCTCCAAACGGTGAAAAAGTCAATGTGACAACTAAACCATCCTCCAAACC
AACCATGCTGTAATTTCAAAGTTCTGAAAGTTCAATGCAGATATCTTGGA
GTGAACCAGTCTATCGAGCTAATGGTATCAAGATAGAGGATTATCGTGTT
GTATTGAAAGatTCTGTTGGCCAAGTCGTTGCAGACAAGCATGTCCAATA
TGTTACAAACATCAAGTTTGACAATCTTAATACCGTCACCAAGTACATTG
TAACCGTAAAAGCAATTGCTGAATTTATTCGAAAAGATTTGACCAACACC
ACCAAAAAGATCCAAGTATACAGCCATCCAGCAACATTGATTGCCTA Run BLAST on NCBI transcript from alignment at sc0000514:216561..217726+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024965 ID=TCONS_00024965|Name=TCONS_00024965|organism=Clytia hemisphaerica|type=transcript|length=1166bp|location=Sequence derived from alignment at sc0000514:216561..217726+ (Clytia hemisphaerica)
ACAATGCTAAGGCCAGTGAACTGGGTagacaaaaaaagtttttcaaaaac
tttttggaagCCAATAAAAACTCAAAGAAGTTTGGTTACcttatttcaat
caatttacGAGACGAAGACCAACCAATCATGGTTCAAGCATTATCCCTGA
TGTACGTCAAATAGGAAAACCTAAAGTGACCTTTGTATCTTACGaccatt
tcaaaatttcagtcaCAAAGCCAAACAATACATGGGTGACTCATTTCTTG
GTGGAATACTGGCCAATCATCGATGACAGCGAAGAAACTAGGCTTACGTT
TGCTTTCAGTCATCAAAATACACGAAACGTCACCATCACTAACTTAAACC
ATTTGACTACATACGAATTCCGTATCGTCCATGTGATAGAATTTGGTATT
TCTCCAAACGGTGAAAAAGTCAATGTGACAACTAAACCATCCTCCAAACC
AACCATGCTGTAATTTCAAAGTTCTGAAAGTTCAATGCAGATATCTTGGA
GTGAACCAGTCTATCGAGCTAATGGTATCAAGATAGAGGATTATCGTGTT
GTATTGAAAGGTAAGAATagatcgaaggatgatgatgatgatgatgatga
tgatgatgatgatgatgatgatgatgattaatattttctttattgctTCA
TGAAACACAcgtatacactggataaacaacaGTCTAATTTTTCATAGTTT
TCTTATGCTCTAATTATGTCCGCAGCATGACATTATTATTCTCTCTCATT
GCTTcattacattttttttcattctttttcatcaaaacacggtctttcaa
ttcccaaatgagaattaaagttttccttagagaggcaaatgcatcaaaat
aattgctaATTGTATCAGTCCATCTAATTTCTATTACGTCCATGCTCGCA
TATCTGAATTACTCTAAAGAATTTCAATgtggaaaaaaatcataaagtgg
tttaattttgatactttttttttcaacagatTCTGTTGGCCAAGTCGTTG
CAGACAAGCATGTCCAATATGTTACAAACATCAAGTTTGACAATCTTAAT
ACCGTCACCAAGTACATTGTAACCGTAAAAGCAATTGCTGAATTTATTCG
AAAAGATTTGACCAACACCACCAAAAAGATCCAAGTATACAGCCATCCAG
CAACATTGATTGCCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024965-exon-sc0000514-1491911889:216561..217120 | TCONS_00024965-exon-sc0000514-1491911889:216561..217120 | Clytia hemisphaerica | exon |
| TCONS_00024965-exon-sc0000514-1510915933:216561..217120 | TCONS_00024965-exon-sc0000514-1510915933:216561..217120 | Clytia hemisphaerica | exon |
| TCONS_00024965-exon-sc0000514-1575043694:216561..217120 | TCONS_00024965-exon-sc0000514-1575043694:216561..217120 | Clytia hemisphaerica | exon |
| TCONS_00024965-exon-sc0000514-1491911889:217540..217726 | TCONS_00024965-exon-sc0000514-1491911889:217540..217726 | Clytia hemisphaerica | exon |
| TCONS_00024965-exon-sc0000514-1510915933:217540..217726 | TCONS_00024965-exon-sc0000514-1510915933:217540..217726 | Clytia hemisphaerica | exon |
| TCONS_00024965-exon-sc0000514-1575043694:217540..217726 | TCONS_00024965-exon-sc0000514-1575043694:217540..217726 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000514 | supercontig | sc0000514:216561..217726 + |
Blast
The following BLAST results are available for this feature:
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