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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024933 ID=TCONS_00024933|Name=TCONS_00024933|organism=Clytia hemisphaerica|type=transcript|length=939bp
AGTGTCGTGCGAGTTCAGGGTAGTGTCGTGTTTGTTCAGGGTAGTGTCAT
GTGAGGTCAGGGTAGTACCGTGTTTGTTCAGGGTAGTACTGTGCGATGAT
AGGGTGGTGACATGAAGTTTTAGGGCTGTGTCGTGTTTCGAAACGTCCTT
CTTCAGTTTTTTCGAGAAGAAGGAAAGCGATTGGACTACAAGATTATTTG
TGACATCAAGCGGTCTGGTTCTCAAGGCGTTCATATTATACGTTGTAAAA
CCTAAACCAATGACAATCTTTTCCCCTTCATTCCATCTCAAGTTAAGCNA
GAAGGAAAGCGATTGGACTACAAGATTATTTGTGACATCAAGCGGTCTGG
TTCTCAAGGCGTTCATATTATACGTTGTAAAACCTAAACCAATGACAATC
TTTTCTCCTTCATTCCATCTCAAGTTAAGTTCATTCAAATCAATACTTTT
GGCATCAGCGTGTAAAAGACGATTTCTCCAATCACGAGCAAGAATAACAA
ATGCTGCAGGACTGATGTCACCAGCTGCTAACTTTTTATTCCAGCCATTT
TTCGGAGGTGGCAATGTTGTGAAATTAATAATCAAAACGATGATAAGAGT
TATATCAAACGTTTGGCTGTCTGTCTGAGTTGAGTTCGGAGGTAATAGAG
TATCTACTTGATCTTGCTTCAATACCCCCTTCTTTACCAAGCGGTTAATG
GTATTCTGCTGCTTTCGAATCTCGGTATTAAGAGCGGTAGGATTCCTTGG
CAGACCAACATAATAATTATGTTTATAATCGTTGTGTAAGTTAGCAAGCA
GTGCTTCTTTTAAGGGTTCGTGAAGCAGAGTAGCCAATCTCAGccagttt
tcaatttcttgaatggCTTGAGCTACAGTAACGTAGGATGACATTCTCAA
ATCTTCAAATAATCATCTTAATCTCATAATCTAAAAATC Run BLAST on NCBI protein sequence of TCONS_00024933-protein >TCONS_00024933-protein ID=TCONS_00024933-protein|Name=TCONS_00024933-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
MSSYVTVAQAIQEIENWLRLATLLHEPLKEALLANLHNDYKHNYYVGLPR
NPTALNTEIRKQQNTINRLVKKGVLKQDQVDTLLPPNSTQTDSQTFDITL
IIVLIINFTTLPPPKNGWNKKLAAGDISPAAFVILARDWRNRLLHADAKS
IDLNELNLRWNEGEKIVIGLGFTTYNMNALRTRPLDVTNNLVVQSLSFXL
NLRWNEGEKIVIGLGFTTYNMNALRTRPLDVTNNLVVQSLSFFSKKLKKD
VSKHDTALKLHVTTLSSHSTTLNKHGTTLTSHDTTLNKHDTTLNSHDT Run BLAST on NCBI transcript from alignment at sc0000513:40131..41069 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024933 ID=TCONS_00024933|Name=TCONS_00024933|organism=Clytia hemisphaerica|type=transcript|length=939bp|location=Sequence derived from alignment at sc0000513:40131..41069 (Clytia hemisphaerica)
GATTTTTAGATTATGAGATTAAGATGATTATTTGAAGATTTGAGAATGTC
ATCCTACGTTACTGTAGCTCAAGccattcaagaaattgaaaactggCTGA
GATTGGCTACTCTGCTTCACGAACCCTTAAAAGAAGCACTGCTTGCTAAC
TTACACAACGATTATAAACATAATTATTATGTTGGTCTGCCAAGGAATCC
TACCGCTCTTAATACCGAGATTCGAAAGCAGCAGAATACCATTAACCGCT
TGGTAAAGAAGGGGGTATTGAAGCAAGATCAAGTAGATACTCTATTACCT
CCGAACTCAACTCAGACAGACAGCCAAACGTTTGATATAACTCTTATCAT
CGTTTTGATTATTAATTTCACAACATTGCCACCTCCGAAAAATGGCTGGA
ATAAAAAGTTAGCAGCTGGTGACATCAGTCCTGCAGCATTTGTTATTCTT
GCTCGTGATTGGAGAAATCGTCTTTTACACGCTGATGCCAAAAGTATTGA
TTTGAATGAACTTAACTTGAGATGGAATGAAGGAGAAAAGATTGTCATTG
GTTTAGGTTTTACAACGTATAATATGAACGCCTTGAGAACCAGACCGCTT
GATGTCACAAATAATCTTGTAGTCCAATCGCTTTCCTTCTNGCTTAACTT
GAGATGGAATGAAGGGGAAAAGATTGTCATTGGTTTAGGTTTTACAACGT
ATAATATGAACGCCTTGAGAACCAGACCGCTTGATGTCACAAATAATCTT
GTAGTCCAATCGCTTTCCTTCTTCTCGAAAAAACTGAAGAAGGACGTTTC
GAAACACGACACAGCCCTAAAACTTCATGTCACCACCCTATCATCGCACA
GTACTACCCTGAACAAACACGGTACTACCCTGACCTCACATGACACTACC
CTGAACAAACACGACACTACCCTGAACTCGCACGACACT Coding sequence (CDS) from alignment at sc0000513:40131..41069 >TCONS_00024933 ID=TCONS_00024933|Name=TCONS_00024933|organism=Clytia hemisphaerica|type=CDS|length=894bp|location=Sequence derived from alignment at sc0000513:40131..41069 (Clytia hemisphaerica)
ATGTCATCCTACGTTACTGTAGCTCAAGccattcaagaaattgaaaactg
gCTGAGATTGGCTACTCTGCTTCACGAACCCTTAAAAGAAGCACTGCTTG
CTAACTTACACAACGATTATAAACATAATTATTATGTTGGTCTGCCAAGG
AATCCTACCGCTCTTAATACCGAGATTCGAAAGCAGCAGAATACCATTAA
CCGCTTGGTAAAGAAGGGGGTATTGAAGCAAGATCAAGTAGATACTCTAT
TACCTCCGAACTCAACTCAGACAGACAGCCAAACGTTTGATATAACTCTT
ATCATCGTTTTGATTATTAATTTCACAACATTGCCACCTCCGAAAAATGG
CTGGAATAAAAAGTTAGCAGCTGGTGACATCAGTCCTGCAGCATTTGTTA
TTCTTGCTCGTGATTGGAGAAATCGTCTTTTACACGCTGATGCCAAAAGT
ATTGATTTGAATGAACTTAACTTGAGATGGAATGAAGGAGAAAAGATTGT
CATTGGTTTAGGTTTTACAACGTATAATATGAACGCCTTGAGAACCAGAC
CGCTTGATGTCACAAATAATCTTGTAGTCCAATCGCTTTCCTTCTNGCTT
AACTTGAGATGGAATGAAGGGGAAAAGATTGTCATTGGTTTAGGTTTTAC
AACGTATAATATGAACGCCTTGAGAACCAGACCGCTTGATGTCACAAATA
ATCTTGTAGTCCAATCGCTTTCCTTCTTCTCGAAAAAACTGAAGAAGGAC
GTTTCGAAACACGACACAGCCCTAAAACTTCATGTCACCACCCTATCATC
GCACAGTACTACCCTGAACAAACACGGTACTACCCTGACCTCACATGACA
CTACCCTGAACAAACACGACACTACCCTGAACTCGCACGACACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024933-exon-sc0000513-1491911889:40131..41069 | TCONS_00024933-exon-sc0000513-1491911889:40131..41069 | Clytia hemisphaerica | exon |
| TCONS_00024933-exon-sc0000513-1510915933:40131..41069 | TCONS_00024933-exon-sc0000513-1510915933:40131..41069 | Clytia hemisphaerica | exon |
| TCONS_00024933-exon-sc0000513-1575043694:40131..41069 | TCONS_00024933-exon-sc0000513-1575043694:40131..41069 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000513 | supercontig | sc0000513:40131..41069 . |
Blast
The following BLAST results are available for this feature:
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