TCONS_00024932 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024932
Unique NameTCONS_00024932
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length294

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024932 ID=TCONS_00024932|Name=TCONS_00024932|organism=Clytia hemisphaerica|type=transcript|length=294bp
TAAAAAACGCCTTTTTGCTACTTATTCATTTAAGATTGCACTCAAATGCA
TTTAGTCGATTTAGTATTCTCAAAGGTATTTCAATATGGCACTTTTTAcg
aggaaaatgataaaaatgctTTTTTGACAAAGTCGTTAAACGCACTTAAT
ATTACAGATTATGGTTTTAATAAAGACAAATTACGGTATTAACTATTAAG
CATCTATCTACATCTTGATTGATGTGTCGATGTGTCGACAAGGACGACTT
CTCAATAACCGGCGAACATTTGTCGTTCACAGAGATTACGTCAT
Run BLAST on NCBI

transcript from alignment at sc0000513:13392..13685

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024932 ID=TCONS_00024932|Name=TCONS_00024932|organism=Clytia hemisphaerica|type=transcript|length=294bp|location=Sequence derived from alignment at sc0000513:13392..13685 (Clytia hemisphaerica)
ATGACGTAATCTCTGTGAACGACAAATGTTCGCCGGTTATTGAGAAGTCG
TCCTTGTCGACACATCGACACATCAATCAAGATGTAGATAGATGCTTAAT
AGTTAATACCGTAATTTGTCTTTATTAAAACCATAATCTGTAATATTAAG
TGCGTTTAACGACTTTGTCAAAAAagcatttttatcattttcctcgTAAA
AAGTGCCATATTGAAATACCTTTGAGAATACTAAATCGACTAAATGCATT
TGAGTGCAATCTTAAATGAATAAGTAGCAAAAAGGCGTTTTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014014XLOC_014014Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024932-exon-sc0000513-1491911889:13392..13685TCONS_00024932-exon-sc0000513-1491911889:13392..13685Clytia hemisphaericaexon
TCONS_00024932-exon-sc0000513-1510915933:13392..13685TCONS_00024932-exon-sc0000513-1510915933:13392..13685Clytia hemisphaericaexon
TCONS_00024932-exon-sc0000513-1575043694:13392..13685TCONS_00024932-exon-sc0000513-1575043694:13392..13685Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000513supercontigsc0000513:13392..13685 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.02363	0	1.41398	2.30559	1.6841	0.4436	2.14074	2.50517	1.40314	1.87699	0	0	1.70918	1.93784	1.23716	1.34205	2.57109	3.15998	3.83189	1.93232	2.35236	1.59625	1.11962	1.70916	0.446934	0.797756	1.95113	2.68378	1.61846	1.07589
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024932 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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