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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024928 ID=TCONS_00024928|Name=TCONS_00024928|organism=Clytia hemisphaerica|type=transcript|length=901bp
NNTTGCACTTTATGCACAGTACAAGCATATGCTAGAATAAGAGGAAATTG
TGTCCAGACTACTGTTaccatttcttttcttttggagGTACCAAATTTAG
CTTCAGTTCTTTCAATTGGAACATGACCATTGCGGCGTTCAAAGTCatca
cttttcattttttcatttccagCTTTAGCATCATCAAAAAGGACAtatat
tttttcacatttaCCATTCAAAACTTTAATGTGCTTAACTGTACCAAGTT
GCCCATTTACAAGTCTATCGTTTATGTCCAGATTTGTAGTCAACAAAACT
CGAGCACCGACTCTTAGAGTAAGTTGATAAGCTATACCTCCAGTATCTGT
GTATTTTTTGTTTCTAACTTCCTGAATTTTACTTTCTGTAAGTCCACGAG
GGTATTGTTCAATggcaaaaatattgataatagGTGTTGACAATGTTTCA
ATCGTTTTGTCATTATGAGCTTTCACCATGCTGTTTTCTGCAAATAAATG
CAAAGCATCCCATGGGTAATTTGGATCATCTTGTGAAACAAATTTGGATC
TCAagattttttcatcttcttctgtTATGATTCCTGTTCTAATGTTGTTC
AGCAAATTTACAAATGTATTGTCACCCTGTTGGCGCATAACCTCATTAAG
CTCagcaaattaaaattgacgcCAAAGTTTTAATAAATTTATCACAAATC
CGTTCAACGTAAACACTGGGCCGCCAAAAACAGGAGGTAACTGATATAGA
ACACCACTAACAATAACTGTCTTATTTGCAAACGGTATACGATCAGATGT
CCCAAATATTTCATAAAGgcGTTGGTGAATTTGCAGTAAAGTCTGTGGAC
TCACCATGGATACTTCGTCAATGAAAATCACGCTAATGTCTTGAAGTTTN
N Run BLAST on NCBI transcript from alignment at sc0000513:225769..226840- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024928 ID=TCONS_00024928|Name=TCONS_00024928|organism=Clytia hemisphaerica|type=transcript|length=1072bp|location=Sequence derived from alignment at sc0000513:225769..226840- (Clytia hemisphaerica)
NNTTGCACTTTATGCACAGTACAAGCATATGCTAGAATAAGAGGAAATTG
TGTCCAGACTACTGTTACCATTTCTTTTCTTTTGGAGGTACCAAATTTAG
CTTCAGTTCTTTCAATTGGAACATGACCATTGCGGCGTTCAAAGTCATCA
CTTTTCATTTTTTCATTTCCAGCTTTAGCATCATCAAAAAGGACATATAT
TTTTTCACATTTACCATTCAAAACTTTAATGTGCTTAACTGTACCAAGTT
GCCCATTTACAAGTCTATCGTTTATGTCCAGATTTGTAGTCAACAAAACT
CGAGCACCGACTCTTAGAGTAAGTTGATAAGCTATACCTCCAGTATCTGT
GTATTTTTTGTTTCTAACTTCCTGAATTTTACTTTCTGTAAGTCCACGAG
GGTATTGTTCAATGGCAAAAATATTGATAATAGGTGTTGACAATGTTTCA
ATCGTTTTGTCATTATGAGCTTTCACCATGCTGTTTTCTGCAAATAAATG
CAAAGCATCCCATGGGTAATTTGGATCATCTTGTGAAACAAATTTGGATC
TCAAGATTTTTTCATCTTCTTCTGTTATGATTCCTGTTCTAATGTTGTTC
AGCAAATTTACAAATGTATTGTCACCCTGTTGGCGCATAACCTCATTAAG
CTCAGCAAATTAAAATTGACGCCAAAGTTTTAATAAATTTATCACAAATC
CGTTCAACGTAAACACTGGGCCGCCAAAAACAGGAGGTAACTGATATAGA
ACACCACTAACAATAACTGTCTTATTTGCAAACGGTATACGATCAGATGT
CCCAAATATTTCATAAAGGCGTTGGTGAATTTGCAGTAAAGTCTGTGGAC
TCATCATGGATACTTCGTCAATGAAAATCACGCTAATGTCTTGAAGTTTA
AGACGAAAATTAGTTCTTTGCTTATCACTTAGTGGTAGAAAACCGTNTGC
AAACGGTATACGATCTGATGTCCAAAATATTTCACAAAGGCGTTGGTGAA
TTTGCAGTAAAGTCTGTGGACTCACCATGGATACTTCGTCAATGAAAATC
ACGCTAATGTCTTGAAGTTTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024928-exon-sc0000513-1575043694:226023..226840 | TCONS_00024928-exon-sc0000513-1575043694:226023..226840 | Clytia hemisphaerica | exon |
| TCONS_00024928-exon-sc0000513-1575043694:225769..225851 | TCONS_00024928-exon-sc0000513-1575043694:225769..225851 | Clytia hemisphaerica | exon |
| TCONS_00024928-exon-sc0000513-1510915933:226023..226840 | TCONS_00024928-exon-sc0000513-1510915933:226023..226840 | Clytia hemisphaerica | exon |
| TCONS_00024928-exon-sc0000513-1510915933:225769..225851 | TCONS_00024928-exon-sc0000513-1510915933:225769..225851 | Clytia hemisphaerica | exon |
| TCONS_00024928-exon-sc0000513-1491911889:226023..226840 | TCONS_00024928-exon-sc0000513-1491911889:226023..226840 | Clytia hemisphaerica | exon |
| TCONS_00024928-exon-sc0000513-1491911889:225769..225851 | TCONS_00024928-exon-sc0000513-1491911889:225769..225851 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000513 | supercontig | sc0000513:225769..226840 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR027417 | P-loop_NTPase |
Blast
The following BLAST results are available for this feature:
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