TCONS_00024907 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024907
Unique NameTCONS_00024907
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length142

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024907 ID=TCONS_00024907|Name=TCONS_00024907|organism=Clytia hemisphaerica|type=transcript|length=142bp
GTATGgtttattaaaggttttgatGGCTAGATATTCAGAGATATTTGTGC
TGAGTCAGTACACTTTACGATATTTTAGCTGGGTAAGAAAAACTTTAAAT
CCTcgtgatttctttttttctctgtCCAGTCTGAGTGCAGTA
Run BLAST on NCBI

transcript from alignment at sc0000512:119279..119420

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024907 ID=TCONS_00024907|Name=TCONS_00024907|organism=Clytia hemisphaerica|type=transcript|length=142bp|location=Sequence derived from alignment at sc0000512:119279..119420 (Clytia hemisphaerica)
TACTGCACTCAGACTGGacagagaaaaaaagaaatcacgAGGATTTAAAG
TTTTTCTTACCCAGCTAAAATATCGTAAAGTGTACTGACTCAGCACAAAT
ATCTCTGAATATCTAGCCatcaaaacctttaataaacCATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013998XLOC_013998Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024907-exon-sc0000512-1491911889:119279..119420TCONS_00024907-exon-sc0000512-1491911889:119279..119420Clytia hemisphaericaexon
TCONS_00024907-exon-sc0000512-1510915933:119279..119420TCONS_00024907-exon-sc0000512-1510915933:119279..119420Clytia hemisphaericaexon
TCONS_00024907-exon-sc0000512-1575043694:119279..119420TCONS_00024907-exon-sc0000512-1575043694:119279..119420Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000512supercontigsc0000512:119279..119420 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024907 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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