TCONS_00024894 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024894
Unique NameTCONS_00024894
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1484

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024894 ID=TCONS_00024894|Name=TCONS_00024894|organism=Clytia hemisphaerica|type=transcript|length=1484bp
tttagcagtagacaaaaattaaaaatttattggATAGTGATTAGAGGTGG
AAAACTGAAGATAATCATCATCAACTGGGAGACACAAGATGCTAGCGTGC
AAGAGATTAAACGACACTACTCACAACACACCGGACAACAAGATGCATAT
TCTCGGACACTTTGTTGGCAAACAATACAACGCCATTgtgGCTCAACCAA
TCACACCTCAAGACATGAACGAATTGAAGAGTGCGTTTGCTTCATTCGAT
AAAAATGACGATgggtttatttcgaaagaagaACTTTCTGAAGCCATGGC
TTGTTTGGGTCACAAAATCTCCAATGAAGAATTAGATGACATCATTAAAG
CTGTTGACATCGATGGTAATGGTTTGGTGGATTTCAAAGAGTTCATTAAT
CTGATGGATAATAATTGTCTGGTACAAAGTATGGATGAGGAGATGCAACA
TCTCTTCCAAATGATCGATAAGAACAATGATGGTTACATTACCGAGAAAG
AAATCAAAGCCATGTTGAAAGGAATGGGAGAAAAAGTCCGCAAGAAGGAC
ATCAGGAAAATGATCAAAGAAGCTGACCAAAATAAagatggaaagatcag
tttcaaTGAATTCAAGACTATGGTTCAAAATGGTAACTACCTGATATGAG
AAGGGGTGCACGCCAAAACAACAAGCTATGGCGTATCGCGTCCTTGAGAT
ATCACTATATCGTTCGCCTGCCGTGACAAAAAAGATTACATGTAGAACGC
GAACCGATTTGACTGGAGGACCACGAAAGTTTGCTGCTGTCAGAATCTAT
ACTCAATGTCAATATTTGTTGAAAATGCAAGATATTCGGGAGAGATATAA
TGAAATAAAGATGGCAGCTTCTGATAAAAAGACGCATAATTAGAGAGATA
AGGAACATTAAAAGGACATGAGTCTCCTCACATGATAGAAATGAATCCAC
ATATAGACATTCAATCAATTCAAATTGTATATAACTTGTAAATATGTTCT
TGTATTTAGTAAAACAAATTGTATTGTCTAattttgttgacaaaaaaatt
CTACACATTGAAGGTAGATTGAGCCTAAAGATtcttaaataattttttgg
caGACTGACTTTTGGTCAAAGGTCTTCTTGACCCTTCCTGGCACCTCAAT
TTCACCAAAATTCTCATGTCCTCAATCCCAATACTTTTATTCAGGAATGC
TGACTTTAATCCCAAACGACACTTGTTAAATATACATTTTTATTCCCAAG
CACTAGTCTTGGAAGTTCGAACAGAAAAACAATACTTTGATGTCAGAAAA
GAACAGTATTTGGTGATTCGCTAAATCTAAGTCAATCAGGGCATGGCAGG
CGTACCAAAAATACCTAAATATAGAAGAACACGGCATTAAATTCACTCAC
AAATTGTCGCAAGATTCCTCATTATAAAATGgagtgttaaaaaaatgctt
tcaactaGTTTAAAGTTCAAGGATTTGGACTTAA
Run BLAST on NCBI

transcript from alignment at sc0000512:157329..167339-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024894 ID=TCONS_00024894|Name=TCONS_00024894|organism=Clytia hemisphaerica|type=transcript|length=10011bp|location=Sequence derived from alignment at sc0000512:157329..167339- (Clytia hemisphaerica)
TTTAGCAGTAGACAAAAATTAAAAATTTATTGGATAGTGATTAGAGGTGG
AAAACTGAAGATAATCATCATCAACTGGGAGACACAAGATGGTATGTATC
TTCGAAAGTAAAACTTTATTTTGAAAACATTGCTCACTTTTCATTTTTCT
ATTCTTCGTTTTCCTCTCTGTTTCACCTTATTTATTAACCACGAACAAGT
CGTAATAGAGACTTTTTAGAGAGAAGGGAGTGGGCGGAAAAGTTCAATTT
CCGAACCGAAATCTTTTTATTGACCCCTTCCTCCTCCTTCTTGTTAGTCA
GATACTAGACTATACAACTATGGTAAAGTCGCTATATAAAACATAACTTA
AAAGGTTGAGTAAAAGGTTAGTAAAAGGCACAAAGGGAAAAGTTTTAAAA
CAAGTCATAGGCGTGGCACTAGATAAGCGGCAGTTCATACTTTATCCGCT
TTTTTACACCGGCCTTCACTTAGCGCCGACCTTGTTACGCCAATTTCTTT
TCAATTTTTAGCCCGGTCCTAATTCAATTCAGATCCCTTACGCCATCCCG
ATAAGGTAGTATAATGCACGCACTACAGCGGCAAAAATTCAGGCATGCTC
TCGCCCAATCATACGCAGAAAATTTAAAAACGGAGATTCAAGTAAAAGAA
AATTGACAAGAACTAACTTCAGTGATGATTGGTCTTTAAAACTTTAAATT
TTTCGAGAAGAATCTTTCTCCCTTAGTTAATTGAATTATAGTAAACCCTC
TCTAATTCGCACCTTCATTGATTCGAATCTTTCTTCCGATATATTTAATA
CATTTAATATCTTCGGTCCTTATTTTACACGCTCTTTAGATTTGTATAGT
TAGGCCGTGTTTATATGTAGAAAATTTTAGTTTACATTCTATGTTCCAAG
TGTCCGCTTATACTGCTTTTACATTTCTTATTTCGATTTAAAACATTGAT
TTTTAAGAATTTCATTTAATATACTCTCCGTAAACCGAATCCCTCTATAA
TTCGAAGCAAATCCTTAGTTCATTAAAGATCGAATTAGAGGGAGTCAGCT
GTATTTTCATTTTTCTGAGGCAAGTGACATAACACACCCTTGGGAACGTG
TTCATGTATTATATGAGCGACCCCTACCTCATCAAAAGAATGTTCTTAGT
TTAGTCAGTGACTACAAAGTGGAAGTTCAGAATTGCTCTGTTTTCGTAAC
AAAGCTCATATATCAATGGATACCATTTCGGATACAAAACATAGGAAAGC
AGACTTAAATTCCAAAAAAATAATTCATTTCGCAAGCGGTAAGCTTTGTG
GCTTAGATAATCAGGCATTGACGTCAGCAAAATTAATTAAGAAAATTGTT
CTAATCCGCTATGGTGTATACAGCATAGTTTGAGGACATACTACATGCTT
GTCACATGTTTCACTAATGATAATATGATAGCATGTAGGGTTCTGAACGG
AAAATTGTTGAGCTTTACTTCAGCATTTACTGAGAGTATTTCTAAAGGAT
TTCGGTGAAATTATTTGCTTAGGAACAAAAAGAGCCTAAAAAGAAATGAA
GATTCGTAAAGAAACAAACATTGGGCATAAAGCCTAAATTACTTTTGCTC
TGAAAATAAGAGAATGAAGAAAGTATCGGAAAAGAACATGCAGAACTGTA
ATTCGTACGGTAATTTAGGGAGATAACGTCTTTTCAGCTAAGGTTCGGCT
TTCCGGGATGTTTCCACTATTTTTTTTTCTCGAAAAAGCCGGCCGAATAT
TCAAAAGGTTTTTTCTAGGGGTATGAATAAAAGGGGGCGGGGCGTCAATC
CTCTTTTTTATTTGCGCTAGACCTGGGAGATCAAATGCTGAGTTGGAGCG
CCACACCTACTCTCAGCTCCCAGTAACTTACCTACCCAATTCAAGATTTG
GTGGAGACCGGGGGTCGAACATAGATTTATAAAGCCCGAAGGGCTGGATG
GCGTGCTTTTGCTGAAAAGTGTGCCGTGGTTAGGTAGGAAATCCTACCTA
AGTCACATGACAATCACATTATAATATAATTTCAGCGATTGACCAATCAG
AAGCTTCGCGAGTTTTCGAAAACAATAGCAGCAATAATTTTTCCGATATT
CACTTTTTTATGCATGCGATGGCTTAAAGCACGACATATCGATTACATCT
ATGGGTCGAACCCACAACCCTTAGATTGTAAGGCGAATGCTCTACCGATT
AAGCTACAAAAAACCTAACAGTCTAATGATTGATTTGAATGCTATATTTG
AAAGTTTATTTATGGAACAAAAAACAATTTTAAAATAACTTTCTTGAAAT
GATTTCAAACTGCATGCGCAAAAAAGAGAGAATGTTTTCTACCACACCAT
ATGCTTCAAAAGTTTGAAGGGAAGCAATAATGCTTTATCGTTGAAAGGAG
CCTTCCGTTTCTATCTCCTGAGAAAGTGTAAAATAATGTGTGACAGAACT
TGTAGATGGAGAGAGGGTTTCTCACTTTTTTGTTGAGGTGTCCAGCAAAA
TGTTTTTTTGTTCCATTTCCTTATTTGTACAAAATGAGAAGTAAATAGTG
GGAGCCCTATCTTGGCTGGTAAAAATAGATCAGGTAAAAGATATTTAGAA
AAAATATCATCGCTTTATCTAATATTTTGTCACAGTTCGACTGGNAAATA
GATCAGGTAAAAGATATTTAGAAAAAATATCATCGTTTTATCTAATATTT
TGTCATAGTTCGACTGTTGCAAAGGATCCTAAGATTTTCAAAGATCTTTC
TCAGAAAGCCTGTCATTAAAAGTTTATGTTATTGGATAATTATTAATTCC
CCAGTATTCGCGAAAGTTTGATATCGTTTCTTCGAGCTAGCGAATTCTAG
TTGTGCGAAGTTCTACAACCCGAAAATAATTTGGTTGGGTAAGTCTTTCA
ACATATTATGAAGAAATCGGAAACAGACAATTTGAAGTGTCATTTCTGTT
TCAAGTGGGTCTGTCAACTGTGTGTCTTATTTTGAAAAAAAAAAACTCGT
TTGCAAAACTTTTGCACAACTTGTCAATATATCAGTAACACATGAAGACC
ACTCATATTGTAAGTGGCTTTTTTATAAGCAAATCTAGAACAGGAAAGGA
TACACAGTAACACATTGCCAACTAAACGTTAGTGACGAACGTGTATAGTC
CAACTATTAACGCATTTGGCAGCCATTTTAGGCCAGTAATGACGTAATAT
TATGTATGACTACAAACACATAGAACACTTGAATTTTCTCATCTTCCCAC
CAAAACATGATCCCTAAAAGTTGAATTGTAAGCAAGTTTGAAGTCATGAA
AAGTTAGTGCAAAATTTCGTGAAGTTTCACAAGTTGAATATGTAAAGTAG
CGATCTTCAAGTACTAATTAATGATTCAGTCCTGAAATTACTTTAAAAAT
TCATCATGGTAATGATCTATAATCACGTTTCATCAATCATCTTTCAAAAA
TATGCTGATTTCAGCATTTCTTCACGAATATTATTTAACACACTCGCATG
ACATAGGATGAACCAGGATTTTGAAGGCTTGAGTTACACAACTGAATGCT
GAATAAACAAAGCCTGAAATTAGAAATCATCAAAAATTTTCCGTAACCGC
AGAATATCAAAATAATAGATGCAAGTGCTTCTTTACAAGCGAAAACAGGA
ATATATACCTTATCAGGAAATGGGAAATTGTTGTGGGGCTGACAAAAAAA
TTTCCTATCGAAAATCTTACCCAATTGGTAATGTGTCCAAAAATATGAAT
TTTTTGAAAGGTGAGAAAATTCCCCCCCAACTTATTAAATACCAAGTTTA
TCCCTAGCCTAGACATAACTAGTATATATAATTCGTTTAAATTGCTTCAT
ATATGATATTGATGTGCTTATAAAAGATGTTCTTACATACGATGGCCGAA
ATGATGTGTAAGGATTGCACAACCAACGGATAGTGACATGAATACGCACG
CTGAGAGAAACATTAAAATTTGTTCATCATGAATTAAAAAGACCGTTTTT
TCTAATGTCCAATTTCTGAAAAAGGTTTATCATTTATTTAGTGTATGGGA
ATAGAAAAAGGTGATAAAAAGGTCCCTAACCTAAGTGCGTATAGCGAGTT
GATGATAAAAATAAAAACAAATATTCCGAATCTAAAGCGAGACGTGACCC
TTCTTAGCCTTTTTAGGAAACAAACATAAATAAAAAATCGCTAGCGAACG
AACGAAAAAACGACGTCATAATATATGCGTATTAATTAGCATATAAAGAT
AAAGAAGTCATGGCAACCCTTTCTAGAAAAACCGGTCTGTACAGAGAAAA
TGATAGAATATTGGCACCAAATTTTGCTGACATCATCAAATAAGATTGCG
GTCGTGATGCATTCCTCTCCCTTTATTTTTCAAAACAAAAATGAGATGGA
TGATTAAAAAAACCGTAACTCTAATTATAACCCTTACTCATAATTTATGC
AAAGAATAAAAGATTACATCATGAATAATTAAGCTTTTATTCTACGTCAC
CTTTTGTTTAACGTTGAATAAATAAAGAGTGCGGAAAGAGGAGAAAAGGT
ATAAAACTTTGAGAAAGAGTGCAAGTATTTCAGTTTCAAATTGATTTTCA
TTCCAGCTAGCGTGCAAGAGATTAAACGACACTACTCACAACACACCGGA
CAACAAGATGCATATTCTCGGACACTTTGTTGGCAAACAATACAACGCCA
TTGTGGTAAGAAAAATATTTTCAAGCAAAACATTCCCACTGGTGTAACTC
TTAATTCCCATGACAACGCTAGCGTAAAAACAAGATGTTTTGCAAGTGTA
ATCTTTCCTCTGATGATATTGACTTAAGAATTTTGATACAAAAAAAGTTA
CAAGTTTTAAGATTGTGATCACACACGAGGTGTCAGTAGGGGCATCGAAT
TGGTGATACACAGTTGTCAAGGGTGATGACATAAACAAAAGATTTAATGC
AAAGAAAGAGAGAGAGATAGGAAAGCGATAATAACGGCTTATTAAATCAT
CATGTGTCGCTATGCTTACTACATATACTTGCTTTAGTAATAAGGATTAT
GGGATGCACAAAACAAAGTGATCAATGCCAATCGAATAAAAAAGAAAAAT
GATTAAATCTATTAATTCTGCACTATTCATCTATGGTAAATGCCTCAGGA
TGAAGGAAAGAAAGCAAGAAAAAATTGTGAACTATAGCACAGTGGTTTAG
TTGGTTGATCGAGAGGAAAAATTTTTGTTGTTGGATGCTGAACGAATTTT
GTGAGAGTTGATTACAATCATCCAAGAAAGGTTTCTTCGTTTAGAAAGCA
GTATTCTCTTTGTGTTTTCCAAACCACTTTTCTAGCGGATAAACTTTATC
TTGTAGGATGATCAACAATTTTTTCCTTTTTTTCTTATTTTATCAGAATT
CGTTTTTTCTTCTCTTTCTTCTTGTTATACCTTCATAATTCATGCAGTAT
AATGTTTTGACAACAAAAATTCTTGGATAAGAAAAGTTCTGCTGTTTGTT
AGTTACCAACTAGCTTGGGNATTCTTGGATAAGAAAAGTTCTGCTGTTTG
TTAGTTACCAACTTGCTCGGTAGAGTGTAGTCTGAGTGACAGTTGTTTCA
GGGGACAGCAAGAAAATTGATACAACGTGGCTTCAATATATGACTAAAAG
ATAGTGGACAGTTTTGAGAGCGTTGCAAATGGAATATGAAGCAGCCCAAG
GCCAAATAAGGCCCTAAGGGTCGAAATCTAGCAAACATATTTGCCAATTA
CTGTACATTAGAAATTCTGAAAAATATCCTTTAATTTTTGATGACGTCCT
ATAGTTACTAGGCAACTAGATTAGCAACCAATTCTCTTGAAGTTAATCTG
GGACGGTTTTGATAAGAGTTCAATAAAATTAGATTAAGAATTCATTTTGG
GTCAGTGGATTTTATTGAAGAGAATATGTCATCTGATTAAAAGCGATCGA
GTTTTGCAAATAAATATGAACTGTTGTGAGAGGGTCATAGCATGGGGAGA
GTTTGTGATGTTTATGTTTCAGCCTTGTTATGCTATAAACTATTTTTACT
TTTAGCTTAGTTGCTTGTTTCTAACGAGAGTTTAATGAACAAGGTCATAG
GTGTTTGTAGAAGAAAATAATATACATCTTTCAACTCATCAAAATTCAAA
CAAAAAATTGTGTAAAGAATAGTTACCATAGGGAATTTGTACACATTTTT
TTTTCATGATATGTTTTCATCTCTTTGACGGATTGATGGCAGATTTTTTT
CATTCAAAATCCGCGAGTTTGATTGCAAAGAAAAGATTTTTATGAGAAAA
TGAAATATATCGATTACTAGCGAGAAAGGACCGGTACATCGCTCTGTGGG
ACGATATATCTCATTACTTAGACTATAATTTTTTGATGTTATATTTTTGC
TTTTTATTTGAAGTATAAAAAACACAGTTGGAAAATTAATCAGAATTTAA
ACAGTTGTTTTGCTTTTCTGCTGGTTATTTTTTTGGAGAAAGAAGATGTC
GCACGCGCCGTTGTCACAGAAAAAGAGTTACACTACGGTACAGACCCCTT
GCTATTCGCCAGACATTACTTTTCACCAGAGGGCCTGTTATTCTTTTCTG
GAATAAAAATAACGAAGGGAACGGAAGAAAAACATTGCTATAACTGATAC
TTTTTTGGTAGAGAAAAGAAAAACACCTTTCGTATATAATGATTTTTTTT
TTGTTGAAAAATAACCTGAATCAAAACAAAAATGAGAGAAATCTTCTAAT
CTCCCTTCGTTCGTCACTTTTTCTTCTTTTCATCGCTTATAATTTTTTCT
TCTTCTTCTTCTTCTCAAAAACAGGCTCAACCAATCACACCTCAAGACAT
GAACGGTAAGCATTGATACAATATTTCACCGGAATTGAAAGCTAATCTAA
ACCCAAATATTGCAGGAGCAAAACTAAACACCCCTGTTTCGGGAGCTCGT
CTAAGTGAAATTGGAGTCAAATCCCACTGGGCACTGAAATGAAATTTCTT
GGGCACTGATACAGGGGTTTATCAAAGGTACTGTTTCTGATATACAAAGA
ACACCTTTGGCAATTATATCTCCCTCATTTTTCAATAGAATTGAAGAGTG
CGTTTGCTTCATTCGATAAAAATGACGATGGGTTTATTTCGAAAGAAGAA
CTTTCTGAAGCCATGGCTTGTTTGGGTCACAAAATCTCCAATGAAGAATT
AGATGACATCATTAAAGCTGTTGACATCGATGGTAAGTGTGAACAAACCC
TTATGTCAAAAAAGAGCCTTGGATCAAAAACTATGAGCAGATGCCACCAT
ATAAAGCAATAAAGTGCACCATTCTTTTTGTTATGTGATAGGAAATTTCT
ACCGATGTAATAACTTTGCCAGGAGAAACAGCTATACAATTTCATTAATT
TGGCAGCTTATTGAAAAAGTAATGTTTAAGGATTTCCGTCAGGTAATGGT
TTGTGTAACCATTTCCTTTGTAAGAAAATCTGAAGGAGAGAGAGGCTTAG
TAAAAAATCTATTAATAAACGGAATGGTTCATTAATAGGATGAGATTAAG
GAGATAATGAGATCCAACCTTTCGTTAATCTTCTGTAGGTAATGGTTTGG
TGGATTTCAAAGAGTTCATTAATCTGATGGATAATAATTGTCTGGTACAA
AGTATGGATGAGGAGATGCAACATCTCTTCCAAATGATCGATAAGAACAA
TGATGGTTACATTACCGAGAAAGAAATCAAAGCCATGTTGAAAGGAATGG
GAGAAAAAGTCCGCAAGAAGGACATCAGGAAAATGATCAAAGAAGCTGAC
CAAAATAAAGATGGAAAGATCAGTTTCAATGGTAAATGCTTTACTCACTT
TAGAAATTCCACAAAAATCCCTTGTGTTGTCCTTAATATCAAATTGAAAA
TAGCAATAATGGGGGGAAAAAAAAACGATTAGTATCGCAATGGTGTATGC
AAGAAAGTTTTGGTGTATGTAAAATATCTATTCCATCAATCTAATCAAAC
AAAACTTTTTATCTTGTTTAGAATTCAAGACTATGGTTCAAAATGGTAAC
TACCTGATATGAGAAGGGATGCACGCCAAAACAACAAGCTATGGCGTATC
GCGTCCTNTTTCTTGGGCACTGATACAGGGGTTTATCAAAGGTACTGTTT
CTGATATACAAAGAACACCTTTGGCAATTATATCTCCCTCATTTTTCAAT
AGAATTGAAGAGTGCGTTTGCTTCATTCGATAAAAATGACGATGGGTTTA
TTTCGAAAGAAGAACTTTCTGAAGCCATGGCTTGTTTGGGTCACAAAATC
TCCAATGAAGAATTAGATGACATCATTAAAGCTGTTGACATCGATGGTAA
GTGTGAACAAACCCTTATGTCAAAAAAGAGCCTTGGATCAAAAACTATGA
GCAGATGCCACCATATAAAGCAATAAAGTGCACCATTCTTTTTGTTATGT
GATAGGAAATTTCTACCGATGTAATAACTTTGCCAGGAGAAACAGCTATA
CAATTTCATTAATCTGGCAGCTTATTGAAAAAGTAATGTTTAAGGATTTC
CGTCAGGTAATGGTTTGTGTAACCATTTCCTTTGTAAGAAAATCTGAAGG
AGAGAGAGGCTTAGTAAAAAATCTATTAATAAACAGAATGGTTCATTAAT
AGGATGAGATTAAGGAGATAATGAGATCCAACCTTTCGTTAATCTTCTGT
AGGTAATGGTTTGGTGGATTTCAAAGAGTTCATTAATCTGATGGATAATA
ATTGTCTGGTACAAAGTATGGATGAGGAGATGCAACATCTCTTCCAAATG
ATCGATAAGAACAATGATGGTTACATTACCGAGAAAGAAATCAAAGCCAT
GTTGAAAGGAATGGGAGAAAAAGTCCGCAAGAAGGACATCAGGAAAATGA
TCAAAGAAGCTGACCAAAATAAAGATGGAAAGATCAGTTTCAATGGTAAA
TGCTTTACTCACTTTAGAAATTCCACAAAAATCCCTTGTGTTGTCCTTAA
TATCAAATTGAAAATAGCAATAATGGGGGGAAAAAAAAACGATTAGTATC
GCAATGGTGTATGCAAGAAAGTTTTGGTGTATGTAGAATATCTATTCCAT
CAATCTAATCAAACAAAACTTTTTATCTTGTTTAGAATTCAAGACTATGG
TTCAAAATGGTAACTACCTGATATGAGAAGGGGTGCACGCCAAAACAACA
AGCTATGGCGTATCGCGTCCTTGAGATATCACTATATCGTTCGCCTGCCG
TGACAAAAAAGATTACATGTAGAACGCGAACCGATTTGACTGGAGGACCA
CGAAAGTTTGCTGCTGTCAGAATCTATACTCAATGTCAATATTTGTTGAA
AATGCAAGATATTCGGGAGAGATATAATGAAATAAAGATGGCAGCTTCTG
ATAAAAAGACGCATAATTAGAGAGATAAGGAACATTAAAAGGACATGAGT
CTCCTCACATGATAGAAATGAATCCACATATAGACATTCAATCAATTCAA
ATTGTATATAACTTGTAAATATGTTCTTGTATTTAGTAAAACAAATTGTA
TTGTCTAATTTTGTTGACAAAAAAATTCTACACATTGAAGGTAGATTGAG
CCTAAAGATTCTTAAATAATTTTTTGGCAGACTGACTTTTGGTCAAAGGT
CTTCTTGACCCTTCCTGGCACCTCAATTTCACCAAAATTCTCATGTCCTC
AATCCCAATACTTTTATTCAGGAATGCTGACTTTAATCCCAAACGACACT
TGTTAAATATACATTTTTATTCCCAAGCACTAGTCTTGGAAGTTCGAACA
GAAAAACAATACTTTGATGTCAGAAAAGAACAGTATTTGGTGATTCGCTA
AATCTAAGTCAATCAGGGCATGGCAGGCGTACCAAAAATACCTAAATATA
GAAGAACACGGCATTAAATTCACTCACAAATTGTCGCAAGATTCCTCATT
ATAAAATGGAGTGTTAAAAAAATGCTTTCAACTAGTTTAAAGTTCAAGGA
TTTGGACTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013987XLOC_013987Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024894-exon-sc0000512-1575043694:167249..167339TCONS_00024894-exon-sc0000512-1575043694:167249..167339Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1575043694:162635..162733TCONS_00024894-exon-sc0000512-1575043694:162635..162733Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1575043694:160485..160515TCONS_00024894-exon-sc0000512-1575043694:160485..160515Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1575043694:160108..160251TCONS_00024894-exon-sc0000512-1575043694:160108..160251Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1575043694:159567..159751TCONS_00024894-exon-sc0000512-1575043694:159567..159751Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1575043694:158395..158452TCONS_00024894-exon-sc0000512-1575043694:158395..158452Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1575043694:157329..158204TCONS_00024894-exon-sc0000512-1575043694:157329..158204Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1510915933:167249..167339TCONS_00024894-exon-sc0000512-1510915933:167249..167339Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1510915933:162635..162733TCONS_00024894-exon-sc0000512-1510915933:162635..162733Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1510915933:160485..160515TCONS_00024894-exon-sc0000512-1510915933:160485..160515Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1510915933:160108..160251TCONS_00024894-exon-sc0000512-1510915933:160108..160251Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1510915933:159567..159751TCONS_00024894-exon-sc0000512-1510915933:159567..159751Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1510915933:158395..158452TCONS_00024894-exon-sc0000512-1510915933:158395..158452Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1510915933:157329..158204TCONS_00024894-exon-sc0000512-1510915933:157329..158204Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1491911889:167249..167339TCONS_00024894-exon-sc0000512-1491911889:167249..167339Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1491911889:162635..162733TCONS_00024894-exon-sc0000512-1491911889:162635..162733Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1491911889:160485..160515TCONS_00024894-exon-sc0000512-1491911889:160485..160515Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1491911889:160108..160251TCONS_00024894-exon-sc0000512-1491911889:160108..160251Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1491911889:159567..159751TCONS_00024894-exon-sc0000512-1491911889:159567..159751Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1491911889:158395..158452TCONS_00024894-exon-sc0000512-1491911889:158395..158452Clytia hemisphaericaexon
TCONS_00024894-exon-sc0000512-1491911889:157329..158204TCONS_00024894-exon-sc0000512-1491911889:157329..158204Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000512supercontigsc0000512:157329..167339 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.838707	0	0	0.267451	1.01794	1.35071e-08	10.8358	0.0216635	14.8395	12.2654	12.301	11.3884	44.6722	77.8755	53.2531	25.9581	14.0519	15.667	42.4445	81.405	4.63662	13.0313	13.512	18.5568	2.67926	0.223368	61.7177	114.675	15.4859	12.6458
Blast
[Close]
BLAST of TCONS_00024894 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.376e-28
Identity = 54/146 (36.99%), Postives = 92/146 (63.01%), Query Frame = 2 
Query:  188 VAQPITPQDMNELKSAFASFDKNDDGFISKEELSEAMACLGHKISNEELDDIIKAVDIDGNGLVDFKEFINLMDNNCLVQSMDEEMQHLFQMIDKNNDGYITEKEIKAMLKGMGEKVRKKDIRKMIKEADQNKDGKISFNEFKTMV 625
            +A  +T + + E K AF+ FDK+ DG I+ +EL   M  LG   +  EL D+I  VD DGNG +DF EF+ +M         +EE++  F++ DK+ +GYI+  E++ ++  +GEK+  +++ +MI+EAD + DG++++ EF  M+
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
The following BLAST results are available for this feature:
BLAST of TCONS_00024894 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.376e-2836.99Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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