TCONS_00024853 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024853
Unique NameTCONS_00024853
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2597

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024853 ID=TCONS_00024853|Name=TCONS_00024853|organism=Clytia hemisphaerica|type=transcript|length=2597bp
TgaaactccgagtatcggaaaataaatttgtctctATCCTTGACGAATAA
TTCATGTTAAGTATACAAAAAGTATCcatggggatacaaaagtcagaCAT
TTTGTGACGAAGATTAGTTAGGCGACACTGGGGCAAACCTTTAGCTATTG
AGGGGGACCTCTCAGTAACCTATTCCTTCGACCAGGATATCCCTTATTAG
AGGTAAGTAGTATACGTAGTAGTCGTACACTAATAGATTTCAATCAACAT
CGATTCTGTTTTTCCAATATTAAGTAATAACTATCAAATAGGTGTAACAT
AATTaacatcaaataaattaaaGTTCTAGAATTCAATTAAGTAACGAGCT
CTCCTTTTCAAGCCCTGTTTCTTCGAACTCTCCTTTCCAAGTCCTGCTCC
TTCGAGCTTTCCTTTCGAAGTGTCCCCTCGAGCTCTCCTTTTCAAGTCCT
GATCTTTCGAGCTGTTCTTTCGAGCTCTCCTTTCCAAGTCTTGTTCCTTC
GAGCTCTCCCAAGTCCTTCTTCTCATTCCTTTCCTCGCCCTATTCAGGGG
TCTGGGCTCGAGGGCCTGAGCCCCACTTTATTGATATATATTCCTCTTTC
AGTTCATTCACATCGTGTTGGCTCAGTCCCAGTCTCTCTTTGCATTATTT
ATCAATGATTAATTTAATAGCTTCACAATATTATGAAAAATCTGAGAGAC
AATCTGAAAAATAATGTAAGTTGATGTTGAAGAAAGGTGAAGAAGAATGA
AACGAACGAGAAAACGAAATGTATATTcgaattattttaattttcttaag
cCTACAACAATTTACCGTGTATGGAGCAATCAAGACGAGTGTCTCAAACA
CAACAGTTGGTAGCACTCAATATATTGTTAAGAAAACAATGTTCAAGAAA
TATCCTAACTTGATGCCAGCATCGACAGCAAACAATTAtcaaagtattaa
tcaagagatTACAAACGCAACTACAAaaaaatgcgGCACATTTTGTTATC
AGGAAAACGACTGCTGGAGTTTTTTATTCTTCCGTTCCAAAACTCCACCC
ACCTGCACACTTCTTGATGGTCCAATCGATCGAACACATATGGACCAGAA
CATAACTGTGGACTATTACGAAGTTTGGAATCAATGTTCATCGAACGACA
GCATTTGCAATTTGGGTGTATGCGTTCCAAATTACGTCACCGATTCGTAC
ACTTGTCACTGCCCGTCTACCTACACCGGTCAACATTGTCAAACATTAAT
TTCCCAAAGTGACGCCACAACTACATCGCAACCCAATGCCCAAGCTACAG
AACAGTTAGGCACCGAGTACACATGCAGTAACAATCCAGTTGTCATTGAT
ACCTACGCAGCAGGGACAACCAGTTGGAAATTAGAAGTCACTTTCACATT
CGAAAGGCTTGTCAAAGGAGTCActttctttgaaatgaaatattataatg
gtaattttaataaattcttTGCATTGCAATTGAGAACGCCGGCAAAAAAA
CTAAGGATGGGAGACCTTaacgaaaacaattttttttttgactttgagcT
AACCACAAAAGGTTATTTTATTCCAACGACaaacactttttacaaaattg
tACTCCATTTCGAGCCTAGTTTAACTGCACCCTCATCTTTTCACTACCAA
CTAAAAGATGGGACAGAAACTTCGCTGTCAGAAGGTACGTTTCCCATGAG
TGTCGGTGGAGATTTGGGGGAACTCAGATTGTATAATGGAAACAGTTTGG
ACGAAGACCACGTGGATAAAGGTTTTGGCGGCAAAATCTGGACCAATGGA
ATACAAGCTGCATAATATCTCTACTATTGATTACAACAGAcaatatacag
ggtgtcccgaaaaaaagtatcgagttcgaaaATGATTCTGAGCAGAAGAT
TGTtgttagcctgggaatccaagctcataatcttagaaaaaacaaaaaat
acctcacctcacaaagttctaagattatagagcttggtgcaggtagatta
gtctgataACGAATGTTATAAACactctgtgtgtgaacccttgttgacgg
actttctgaactttggaattcaaggcaaacacacataatcaacttaccat
aaaaactctttcacaagctctaaagactttcaaaactactacactaaaaa
ccacatcagcctcatgtatttagacttccatccaacagccattttgtttg
taaatgaatctatattttcattttcatttgttttccttttttctgcagag
tcagcttctTCTATAAATTATGCACGCGcgtcgaaattatcaaaatacgc
gcgaaagtactgctaagtaatacgcacaAAATCTGGCCAATCAGAatgaa
cctgcattgcagggaaaaatctccctgcaggcgagttacctgccccaagc
gttaaacaagtagcaaaaatatcataaactagactgtgaacaaaggttaa
cgcttggattcccaggctagattGTTGTgtgtgtgtttaacaaaatgtaa
gaaaatatataccaaacacaataattgtttttacaaaacagtcattatga
ttaaaaagaattaactttctttacaattttcatgacgttaaagttat
Run BLAST on NCBI

transcript from alignment at sc0000512:33396..49919+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024853 ID=TCONS_00024853|Name=TCONS_00024853|organism=Clytia hemisphaerica|type=transcript|length=16524bp|location=Sequence derived from alignment at sc0000512:33396..49919+ (Clytia hemisphaerica)
TgaaactccgagtatcggaaaataaatttgtctctATCCTTGACGAATAA
TTCATGTTAAGTATACAAAAAGTATCcatggggatacaaaagtcagaCAT
TTTGTGACGAAGATTAGTTAGGCGACACTGGGGCAAACCTTTAGCTATTG
AGGGGGACCTCTCAGTAACCTATTCCTTCGACCAGGATATCCCTTATTAG
AGGTAAGTAGTATACGTAGTAGTCGTACACTAATAGATTTCAATCAACAT
CGATTCTGTTTTTCCAATATTAAGTAATAACTATCAAATAGGTGTAACAT
AATTaacatcaaataaattaaaGTTCTAGAATTCAATTAAGTAACGAGCT
CTCCTTTTCAAGCCCTGTTTCTTCGAACTCTCCTTTCCAAGTCCTGCTCC
TTCGAGCTTTCCTTTCGAAGTGTCCCCTCGAGCTCTCCTTTTCAAGTCCT
GATCTTTCGAGCTGTTCTTTCGAGCTCTCCTTTCCAAGTCTTGTTCCTTC
GAGCTCTCCCAAGTCCTTCTTCTCATTCCTTTCCTCGCCCTATTCAGGGG
TCTGGGCTCGAGGGCCTGAGCCCCACTTTATTGATATATATTCCTCTTTC
AGTTCATTCACATCGTGTTGGCTCAGTCCCAGTCTCTCTTTGCATTATTT
ATCAATGATTAATTTAATAGCTTCACAATATTATGAAAAATCTGAGAGAC
AATCTGAAAAATAATGTAAGTTGATGTTGAAGAAAGGTGAAGAAGAATGA
AACGAACGAGAAAACGAAATGTATATTcgaattattttaattttcttaag
cCTACAACAATTTACCGTGTATGGAGCAATCAAGACGAGTGTCTCAAACA
CAACAGTTGGTAGCACTCAATATATTGTTAAGAAAACAATGTTCAAGAAA
TATCCTAACTTGATGCCAGCATCGACAGCAAACAATTAtcaaagtattaa
tcaagagatTACAAACGCAACTACAAagtaaagttttaaagaaattttta
attaaatgCTATAGTTCTATAGTATTGTGGATGAGTTAAGTTTAACCGTA
TCAAAGAACCGGCCTGGAGGCAGCAAAACCGAATATTCTTACTTTGTTCT
TAAtactttggccatcgaagccttctgttcttatatagtttttttaaata
agaaaacgTGTATCACGAGTTTGAAACATTAGATGAAGATCGAGGGTTAA
AGTCAAAAGAATCAATAAAATTAAtagtaaaatcaataaaatcatgTACG
TttttaaatcaatgaaaattaaataagaTGGGTATGTTCAACGGTCAAGG
AGATATTTTTCAAGatagcagaaatgcactgtaaaggaAGACTTTTTATG
CACTGTTAGGGTAGAAACTTCAGcaaatcgaaaaaaaacttttgcccaaa
tattctgattttttttctcctctaaaaaagataaaaatttgacaaaaatg
cactgtaagggtatgaatttcacaatttttgcTGTACTTTTTGCGGGTAC
GATtctaaaagtcaatttttttcgcCNNNNNNNNNNNNNNNNNNNNNNNN
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AAAGGAGTCActttctttgaaatgaaatattataatggtaattttaataa
attcttTGCATTGCAATTGAGAACGCCGGCAAAAAAACTAAGGATGGGAG
ACCTTaacgaaaacaattttttttttgactttgagcTAACCACAAAAGGT
TATTTTATTCCAACGACaaacactttttacaaaattgtACTCCATTTCGA
GCCTAGTTTAACTGCACCCTCATCTTTTCACTACCAACTAAAAGATGGGA
CAGAAACTTCGCTGTCAGAAGGTACGTTTCCCATGAGTGTCGGTGGAGAT
TTGGGGGAACTCAGATTGTATAATGGAAACAGTTTGGACGAAGACCACGT
GGATAAAGGTTTTGGCGGCAAAATCTGGACCAATGGAATACAAGCTGCAT
AGACGTTTGTGACTGAAACAAACGATAAAgacaattcaattcaaaaattg
aaatgaatattGAAACTTGATatattgaaaacttttaaatctttttttct
agGGATCCTTTAACTTGAAATGTGTCTCAAAATAAACCTTTTAGCCTcta
gaattaaaaaaacagaTACCTCCGTTACCCAATTAACCTGATAATGTGCC
CCTTCAATTCAGCTCTCAACCTGGCGTTGAGGGCTTGTGTGTGATTAGCT
CATACCATTTCAATAACAGTTGATTGGAACTCTTGTAAAAGAGGGCCTGC
TCGAGTGGTAGCGTATGTAGTGAGTACCTCACCAAAAAACAGGATTTTTC
ATACCGTTTCTTGATAagttccactttgatgattttagACGGAGATCTTG
ACGTCAATACTTGTTTGAACGTCACTCAAGAGCGGTCCGAAGAGCGGCGT
TTGATAATATAGTATTTATATAGGTTTTTTACAGGGTTTTTCAGTTTCTC
TTTATGGTCTTTTCAGGTATTTTGCAGGTCTATCGTTTGGTCtacttttt
tgggtttttttggCTGATTGTCTATTTGCTCTAGTATTTATTACaccatt
tatttatttatttccgAATTGTATTTACATTATTTAAGTATTgttaattt
aattttagaaaattagaaGTCTTTCaactactgcaggagcttcgaaagtt
caaaatgacgtcaaaaaatcgaatgtttggagtcAGAAAACCTGggctct
aaaaatttgaaaaaatgacggGATCGAATAGAATCATGGCATTCTAAATC
TAGAATGGAATAGACGTCACTGCGTCAAAAAAAACCGCGATGTgtctaaa
gtctatttcaaaNGAATGTTTGGAGTCAGAAAACCTGggctctaaaaatt
tgaaaaaatgacggGATCGAATAGAATCATGGCATTCTAAATCTAGAATG
GAATAGACGACACTGTGTCAAAAAAAACCGTGATGTgtctaaagtctatt
tcaaaattagctggcagtgttttttcaaacctcaataacttttgatagaa
tttgaattaagtagcgattttgtgcttgttgaaaagacaaacaggagtgg
gatattgtcataaagaaaaaaatcaaaaaagatcgaaaaatgaagattga
aaataaagatgaagaaaatcaacttcttcaataattgtgcCATAAGAATC
ATCACACGAGTGATTCTTTGTGATCTTAGAACATCaataatgtgaaaaaa
aaaaattcaaaaaaatttatttcatcgaaagatatagtccaaagtttaac
aatgattgacttcaaaaatcatcaaaaacaacaaaacaagaGCCCTTTTT
TAAGTCAACCAGGGCAAAGATTTAAGCtgtattttatgattgaataaata
ttttttaaatattttttcacatttatgacgttctaagattgaagagtttc
tgattcaaaaatgaagatcatagcattattctactagaagttgattttct
tcttctccatttttcatcttcgtttttccattttttgaatttctttcttt
tttgataatactCCACTcaggattatctttttaacgagcacaaaactgct
aactaattcaaattctatcaaaagttattaaggtttgaaaaaacactgcc
agctaatttgaaatagactttagtttagaaaaaagttgttggTTATCAGG
CCAAACGCAATTCGACCGTAGCACCATTCGTATCACTGAAGCTTTGAGTT
TCGATGAACTCATCCTTAGGATAGATCAGAGTTCTGACCTTAAATTTAAA
TCGTTAAATAAACAAGGGAGGTTTCAAGACATTATGTTGAAAGGTTACAT
TGAAACATgtacataaataaaaaattttgacgCAGTTTAGAAAATTAGTC
TGGGATACTCAGTCTACTTTTActtttactaaaatttttacatgagtaaa
gcacttttttatttatgttcagtgtgacattttttttcacttttagcACT
ATTTTTTACATAAATTGTTACTCTTTCTAAACTTTTAACTTTCATCTTAA
TAAAATAATACGTGTTCACAGCTACAGTTATAGGCTACCTGCTATAGGCT
ATATGCTTTATCGGACCCTGTTTTATATCGGACCTAATTAAATTTGGAAT
AGATAGAAGGATCTAATTTGACGTTTTAAGGGCCAAAGAATCAAAATGAG
GATCGGTGAATTTGTTATCGTATTTACATTTCGATATTGTTTATAATTTG
ATATCCACTTATGGGTTGGACGTcctccactgacctttatataccctgga
ccaagtttgtCAATCCTGGCCAAGAAGCAAAATCTTTAATCGATGTAAAT
GCAGCGAGAGCGCTATGTCCACTTTTCTCTAATACTCttgatgatgtagc
gctgtTGCAGATTTCTTTCCGTCAGCGGACGCAGACCTGAATTAGCGGTc
gcagacctgatttagcggccTGAATTAAAAACCGAAGACTTAATGCAGCG
GTCGAGTACCTTTTTTAGCGGCCCAAGACCTGGAGAAAATGAATTGTAGA
AATTTGTTATAACTTCATTCAAGATTTTTATATGATGTTTCAATAGGAAA
Tagtattgaaaacaaattaagctaaaagattttaaaccaaaaagaatgaa
attaaTGCCAATAACTTGTCTCGAACTACCTAGCTTTCGTTTTCGATACC
ACTGCACTAACCACTGGACCATCGCAACTGATGCCTTGCCGAGTGGTTCA
AGCTAGTTTAACTGAACCTAACTTATCTATCAGGTCTTCGGCCGGTGACt
tgctaaatcaggtcttcggccgttaattcaggtcttcggccgttaattca
ggtcttcggtcgttaattcaggtcttcggccgttaattcaggtcttcggc
cgttaattcAGGCCTTCGGTcgctaaatcaggtctgcgtccactgacgaa
aaaaaaaattagcagGGCTGTTAGACGTCAGCTTTCAATACTGAATTGTC
TTCTTTGtcggtaccactttcaaaagaattccgatcaaagatggtatAGC
TATGTCCAGGGTATATCAAggtccgtgacatctttttaaGGTAAAAAAAT
TCCTTGCTTTGAAGAATTGCAAGACTTGAACTTCAGCTCTCTGGAAATAA
AAAGATttgttgatacttgaaatggTTTCCAAcccttttgaaaataaagg
aatATTACAAGAGTGCAGTGGCTCGATCTATTTAAGGAATCTTTAAACGA
AAGGGGGTGAAAAACAATTCCCATGGAATAATTTGAAGTCTGTTGCACTG
GAAAACTGGATTGGAAAATAGGCCATATACTGACTATTTATTCGGGTATT
TCCTGTTAGACGAACGTGTGCCCCGAAAAGGGCTCtctctttttcaactt
ttcacaAAGTGATGAATAACACTCCCCACagtaaactttttttcaaaatg
aaacccCGTAtgtattcacccaaggaataaGTATGCCAAGTCCGACCCTG
GTATTTTCCAGGTTGCCTTAAGTATTCTAGAAATACTGTACATACACAAA
TTTACACAGACCTTTCAGATTCAAACTcaactaaaattaaaaagtatagA
TTTCGGAGCAACTCAAGTTGGTTTACAATAATAAGAATAATAAAGTTATA
GCTATAGGCTTACTCGGGATGGGACAGTCACTCCACCCAAGAAGGCTTAC
TAATACACAGGAATTATTATTACCTAAAGaacacaatttttgaaatttcc
gcaGATATTGGGTCTAGAACAGTCCAAGATGTAAACTCAATTTAGATAGA
GCACACGTTGTGCGAAGTGTACCACAGACAcagacactttttttataaga
acaaactatataaaacgTAAGACTTCGatggtgaaaatatttttaagagc
CAGTtgagagcattttaaggctttgcagacctATTCCTTAGGAAAATCAA
CATAAATTACTCACagaatggtaaaaataagaacatgttaaaaaaatatc
ggaaagcttcaaatattttggatgttcttatatgaaaaacgtgtatacac
aTTGCACCATTGAGAATTAATGGGGAGTCGAAAACTGATTCtcaactttc
aaaatttatctATTCATGAGTGAGAGGCATTAAGATTAATcagaataaaa
aaatagaaaaaagagaaaaaagtaaaatattaatCAATAGAACTAAAAAT
AATCATCAATACATGCATTGATTAGTCATTGATATCAAGCTTGATTCAGG
AATACAAAAAAGATATTACGAAAatgtaaaaaactaaaaatttattcaaa
ttattcgATATATGTGATAGTCTGGGGGACTGAAGAAAAGAGAAGCGAAA
CTTTACAAGATGGATGGCTATGCAATTAATTTGGTAATGTATATTCAAAG
TATCATTATTTTCTTAAGCCTACAACAATATACCGTGTATGGAGCAATCA
AGACGAGTGTCTCAAACACAACAGTTGGTAGCACTCAATATATTGTTAAG
AAAACAATGTTCAAGAAATATCCTAACTTGATGCCAGCATCGACAGCAAA
CAATTAtcaaagtattaatcaagagatTACAAACGCAACTACAAagtaaa
gttttaaagaaatttttaattaaatgCTATAGTTCTATAGTATTGTGGAT
GAGTTAAGTTTAACCGTATCAAAGAACCGGCCTGGAGGCAGCAAAACCGA
ATATTCTTACTTTGTTCTTAAtactttggccatcgaagccttctgttctt
atatagtttttttaaataagaaaacgTGTATCACGAGTTTGAAACATTAG
ATGAAGATCGAGGGTTAAAGTCAAAAGAATCAATAAAATTAAtagtaaaa
tcaataaaatcatgTACGTttttaaatcaatgaaaattaaataagaTGGG
TATGTTCAACGGTCAAGGAGATATTTTTCAAGatagcagaaatgcactgt
aaaggaAGACTTTTTATGCACTGTTAGGGTAGAAACTTCAGcaaatcgaa
aaaaaacttttgcccaaatattctgattttttttctcctctaaaaaagat
aaaaatttgacaaaaatgcactgtaagggtatgaatttcacaatttttgc
TGTACTTTTTGCGGGTACGATtctaaaagtcaatttttttcgccgcacat
accatCACTTGGTATACCAACTGCCCCCACCCCTGTGATGAAAAGCTGTC
TGAAAGTCTCAATGTCTGAAAGACTCAAATTTGCAAAATCTCAAGAATTC
TTTGTTGCAAGATTACTACTATTCTTACAGGGAGGGGTTTCAAACATTCT
TAACAACTTAAACAGCTCTTGGATATCATCGAGCATTCCCCCAAATAGCA
GCAAATTTATATTGTACCCCCCTCTCTCATTCTTAACAACTTAAACAGCC
CTTGGATATCATCGAGCATTCCCCAAACACCAGCAAATTTATATTGTACC
CCCCTCTCTCATTCTTAACAACTTAAACAGCTCTTGGATATCATCGAGCA
TTCCCCCAAATAGCAGCAAATTTATATTGTATCACCCTACCCTTTAAAAC
TTTTCTTGAAGTTTGAACCCCCCCTATGGATGTGAGatgaaatgttttga
aacaGTTGTTTGTAATAAATCCTGTAAAATTTGTTTGCTTGATTCTGAAA
TGGTTCCACCATTCTGTATTTCTATAATTCTTTCCACCTAGTTATTNTGC
TTGATTCTGAAATGGTTCTATCATTCTGTATTTCTTTAATTCTTTCCACC
TACTTATtcattaatattttctttcagaaaatgcgGCACATTTTGTTATC
AGGAAAACGACTGCTGGAGTTTTTTATTCTTCCGTTCCAAAACTCCACCC
ACCTGCACACTTCTTGATGGTCCAATCGATCGAACACATATGGACCAGAA
CATAACTGTGGACTATTACGAAGTTTGGGTAAGATCAATTTAGACAGCCA
GCGTTTTGTCTTCCATTCTTACTGTTGATGAAAATCAGTTGATTGCGTTG
CATTATTTTGACACTAAAGATCAATCAGACCAGCAATGGCAACATCAAAT
CTTTTACAAGATTCTAAATTTTTGATGCAAATTCTAACAATTAGAAAATA
AAAGGACAAAAAGTCTGCTGTCTATAACTATCTATCATCAATACCGGNTT
TGATGCAAATTCTAACAATTAGCAAATAAAAGGACAAAAAGTCTGCTGTC
TATTACTATCGGGCTAGcttatagaaaaatatttaagaacGCATCTATCC
TAATCTTTTAGCTTTATCCAAAAGCTTTATTAATGAAAAAATTGTCTTCA
CATTTTCAGAATCAATGTTCATCGAACGACAGCATTTGCAATTTGGGTGT
ATGCGTTCCAAATTACGTCACCGATTCGTACACTTGTCACTGCCCGTCTA
CCTACACCGGTCAACATTGTCAAACATTAATTTCCCAAAGTGACGCCACA
ACTACATCGCAACCCAATGCCCAAGCTACAGAACAGTTAGGCACCGGTAA
GAAATAAAAGTAATTAATATAAAGAtgataaaaaaacatataaataaGAA
AGAAATCAGGACTTTGACTATCAATGACAAGATATCTCGTTTCGTCATCG
ATGTCGGAGCCAAAAATGACTGGAAGAGTTACTGGGAATTCAAATAATTC
CAGAACAAAAAAGGTAAATTAGGggcttttctaagcactttttttGTCGG
AATACCGGCCAAAATACTCAAGATTGAGTTCATGAAACATATTATTTTCT
ATGATAAACAGTGGAGTTTCTTATTGGCGGACACTTTTGAGGAGAAAGGG
TAGTGTCCgttaatcagaggtgtccgcctatTTGGGACTTTAGATTAGCA
GACACCAAGGTGTCGCAAACCTAATATTTTGATCCTAAATGATTTCTTGA
GATACAGTGTCACAAAAGGAAACATCTAAAGATTATTGAAACAAaggaat
ttattttctttttatcgtcaacatgaaaaatatgagcaatctgattggct
aaaaacgcgtacataagtgctgtatttcatattgtgccgtacaaatacaa
gaccACGTTaaaaaggggtctggtaagcTAGAAATCGTATCTTGAACTTT
CTTACCGAAATTTATTCCcagaaatgtttttgttttccactcgtttcttt
aatatttttcaagttgacgataaaccagttatcacactttCACTCGTACA
ATATTGGATATAATTTTCTCGTTCAGAGTTTTCTAGTTTGACGAAAATTC
TAAACTCGAAAATTGTACTCTGTACCGTGTGATAAATATTATTAAATTAT
AAGAAAATGTCcaatatcttttgaaaatttgatacaAAGCCAATACTGAA
GtcgtgaaaaagaaattcagtttcaagaaaattattttacaaCTTCTtat
taaacaagtgatacttttatggacctacctggttatgcatttaacacata
tataattgatatctacNatttgcccaaaaatatttttttcgaaaatcggg
ctccgtcacattcgagggtttatagttatgcatctttgtgcgaAAAAATC
ATGAAGattgaaagagccaatctcgagaaaagctaatacctaagtaatta
ataatgtgcttataaaaaaatttcgaatttggccagtttttaaaaaaaaa
cacgccaagcaaccaaaatttcatgtctaaacacacaaaagtaagccctc
atgagcaaaaaaaaacatctatctcataaaagaaattgagtaatttgact
aagagcatcgatgtatgcttattaatagtgattcttatagataaacatgc
gttttttgagccaacaaaatttttttgcaaaaatctgcttgattttgaat
tgaaattaatgattcaatttttcacaaagtccaaaaaacccgttttttag
cctttttttggCCCATAttggcccaaaatttttttttttttgaaaatcgg
gctccgtcgcATTCtgcccaccaccattttgcacctttgtaccaaaaatc
aaaggattcctatgattcaatcctgagaaaagttggtgacagacgaacga
acgaacgaacgaacgaacagacgaacacaggttaatttataggacctcta
ccccaccagggtaggtccaataaaacAGAGGTTCCACTGTAGAAAGGAGA
TGCACCTCTTATCCAGATCATGTatagtaaaaaaagaattttttcgaaat
cgcgCTTGCGCGGCGGGGAGAGGGAGGAAGttgttatttattttgtttga
aaataccAATGATGGTAGATACATTAAATGATGCCCTTAAACAATTATAC
CCTGATCTGTTANGGGAGGAAgttgttgtttattttgtttgaaaatacaA
ATGATGGTAGATACATTAAATGATGCCCTTTGTATATCATGATCTGTTAT
AACtcgtaaaatttactttttctctCTATTCCATATTCATAGAGTACACA
TGCAGTAACAATCCAGTTGTCATTGATACCTACGCAGCAGGGACAACCAG
TTGGAAATTAGAAGTCACTTTCACATTCGAAAGGCTTGTCAAAGGAGTCA
ctttctttgaaatgaaatattataatggtaattttaataaattcttTGCA
TTGCAATTGAGAACGCCGGCAAAAAAACTAAGGATGGGAGACCTTaacga
aaacaattttttttttgactttgagcTAACCACAAAAGGTTATTTTATTC
CAACGACaaacactttttacaaaattgtACTCCATTTCGAGCCTAGTTTA
ACTGCACCCTCATCTTTTCACTACCAACTAAAAGATGGGACAGAAACTTC
GCTGTCAGAAGGTACGTTTCCCATGAGTGTCGGTGGAGATTTGGGGGAAC
TCAGATTGTATAATGGAAACAGTTTGGACGAAGACCACGTGGATAAAGGT
TTTGGCGGCAAAATCTGGACCAATGGAATACAAGCTGCATAATATCTCTA
CTATTGATTACAACAGAcaatatacagggtgtcccgaaaaaaagtatcga
gttcgaaaATGATTCTGAGCAGAAGATTGTtgttagcctgggaatccaag
ctcataatcttagaaaaaacaaaaaatacctcacctcacaaagttctaag
attatagagcttggtgcaggtagattagtctgataACGAATGTTATAAAC
actctgtgtgtgaacccttgttgacggactttctgaactttggaattcaa
ggcaaacacacataatcaacttaccataaaaactctttcacaagctctaa
agactttcaaaactactacactaaaaaccacatcagcctcatgtatttag
acttccatccaacagccattttgtttgtaaatgaatctatattttcattt
tcatttgttttccttttttctgcagagtcagcttctTCTATAAATTATGC
ACGCGcgtcgaaattatcaaaatacgcgcgaaagtactgctaagtaatac
gcacaAAATCTGGCCAATCAGAatgaacctgcattgcagggaaaaatctc
cctgcaggcgagttacctgccccaagcgttaaacaagtagcaaaaatatc
ataaactagactgtgaacaaaggttaacgcttggattcccaggctagatt
GTTGTgtgtgtgtttaacaaaatgtaagaaaatatataccaaacacaata
attgtttttacaaaacagtcattatgattaaaaagaattaactttcttta
caattttcatgacgttaaagttat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013976XLOC_013976Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024853-exon-sc0000512-1491911889:33396..34372TCONS_00024853-exon-sc0000512-1491911889:33396..34372Clytia hemisphaericaexon
TCONS_00024853-exon-sc0000512-1510915933:33396..34372TCONS_00024853-exon-sc0000512-1510915933:33396..34372Clytia hemisphaericaexon
TCONS_00024853-exon-sc0000512-1575043694:33396..34372TCONS_00024853-exon-sc0000512-1575043694:33396..34372Clytia hemisphaericaexon
TCONS_00024853-exon-sc0000512-1491911889:45973..46123TCONS_00024853-exon-sc0000512-1491911889:45973..46123Clytia hemisphaericaexon
TCONS_00024853-exon-sc0000512-1510915933:45973..46123TCONS_00024853-exon-sc0000512-1510915933:45973..46123Clytia hemisphaericaexon
TCONS_00024853-exon-sc0000512-1575043694:45973..46123TCONS_00024853-exon-sc0000512-1575043694:45973..46123Clytia hemisphaericaexon
TCONS_00024853-exon-sc0000512-1491911889:46505..46691TCONS_00024853-exon-sc0000512-1491911889:46505..46691Clytia hemisphaericaexon
TCONS_00024853-exon-sc0000512-1510915933:46505..46691TCONS_00024853-exon-sc0000512-1510915933:46505..46691Clytia hemisphaericaexon
TCONS_00024853-exon-sc0000512-1575043694:46505..46691TCONS_00024853-exon-sc0000512-1575043694:46505..46691Clytia hemisphaericaexon
TCONS_00024853-exon-sc0000512-1491911889:48638..49919TCONS_00024853-exon-sc0000512-1491911889:48638..49919Clytia hemisphaericaexon
TCONS_00024853-exon-sc0000512-1510915933:48638..49919TCONS_00024853-exon-sc0000512-1510915933:48638..49919Clytia hemisphaericaexon
TCONS_00024853-exon-sc0000512-1575043694:48638..49919TCONS_00024853-exon-sc0000512-1575043694:48638..49919Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000512supercontigsc0000512:33396..49919 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0482381	0.211243	0.327611	0.0667504	1.11422	0.869618	0.245574	0.326881	0.239845	0.390211	0.103435	0.12756	1.15393	0.715852	0.318098	0.28797	0.239768	0.0975863	1.13278	1.90312	1.17661	0.872991	0.194477	0.376487	0.328842	0.0978279	0.0707069	0.0833904	0.0589662	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024853 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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