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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024844 ID=TCONS_00024844|Name=TCONS_00024844|organism=Clytia hemisphaerica|type=transcript|length=1115bp
ttaaaataaaaagtaaaaaatgaaaaatgcaaaaaaataaaaattgcaaa
aaaatacaaaaaaaaagaaaaagtaaataatttTTGCTATTAGCCAGTGT
TCAGGGTAGGTGAAGTGAGCACTAATCAACAAAtataaactttgttttga
ttggctTGTTATTATGTTTTGATTGGTCATTGATTGGTTTTTACTTTGTC
GGTGCTTGATACACAATGTGGTTGGTTGGAGAAGGAAAAGGTGTGGCgtt
cttcatcaaaatcttaCTAATCCGAATCCCTGCTCTTGTCTTTTGATCTT
CAAAACGTTTGTTGAATATCCATCGCTTGAATTGAACAAAGTCATTCTCG
AATACACCAGAACTTTACCATAACTGAGTAACTCGTTCATAATAtagaaa
tgattttcaaatgttcttaCATATCTTCCTACTAAATCCAACATAATCGC
ATTAGCTTTATGGCTAACGTAGCCAACAATTAACACTTTAATGTCAATAC
TTACCATACATTACAACATTGCTGGGAAATAACAAATCTGAAGTCACAAC
ATCGATGATATTTCTGATAAAACCAAGTTTATAATACTTCGATGTACAAT
ACTTACNAATAATGTTCCTGATAAAACCAAGTTTATAATACTTCGATGTA
CAATACTTACACAAGACAATCTGGAGACACGAGACTCAAGACAAATAACT
TAAAGACCTGCTGTCATAAACTCCTACATGGTTACATGTAGTCAACTGCA
AGAAGAACGACCTCACCGATGGCCCGGTTGGTGGTTTGTTTTTGCTGAAA
GTAACTGGTATGTGGCTTATTGTTTTGTTGATTGCTTGCAACTTTATTGG
AAATGATTCGAATACACAGAGACACTTCACATATCATCCCTTTGTTAGTC
TTTCAATTACTTTTTCATAAATAGTCTTTTTTTAATGCTGAGGTTGTTCG
CTGATTTGAATTGATTGTTGCTTGAAAAAAGTCCTTTTACAAGATTTTCT
TTTAGTTTCTTTTCGTATTCGAATCAAGCTTTATGGTAAATGATGTCAAA
AGAGCAATCTCTTAACCTTTCAAGTGATCATATGTCTTCACATCGTTAGT
CTTGATGGTTTAAAT Run BLAST on NCBI transcript from alignment at sc0000511:119752..120866 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024844 ID=TCONS_00024844|Name=TCONS_00024844|organism=Clytia hemisphaerica|type=transcript|length=1115bp|location=Sequence derived from alignment at sc0000511:119752..120866 (Clytia hemisphaerica)
ATTTAAACCATCAAGACTAACGATGTGAAGACATATGATCACTTGAAAGG
TTAAGAGATTGCTCTTTTGACATCATTTACCATAAAGCTTGATTCGAATA
CGAAAAGAAACTAAAAGAAAATCTTGTAAAAGGACTTTTTTCAAGCAACA
ATCAATTCAAATCAGCGAACAACCTCAGCATTAAAAAAAGACTATTTATG
AAAAAGTAATTGAAAGACTAACAAAGGGATGATATGTGAAGTGTCTCTGT
GTATTCGAATCATTTCCAATAAAGTTGCAAGCAATCAACAAAACAATAAG
CCACATACCAGTTACTTTCAGCAAAAACAAACCACCAACCGGGCCATCGG
TGAGGTCGTTCTTCTTGCAGTTGACTACATGTAACCATGTAGGAGTTTAT
GACAGCAGGTCTTTAAGTTATTTGTCTTGAGTCTCGTGTCTCCAGATTGT
CTTGTGTAAGTATTGTACATCGAAGTATTATAAACTTGGTTTTATCAGGA
ACATTATTNGTAAGTATTGTACATCGAAGTATTATAAACTTGGTTTTATC
AGAAATATCATCGATGTTGTGACTTCAGATTTGTTATTTCCCAGCAATGT
TGTAATGTATGGTAAGTATTGACATTAAAGTGTTAATTGTTGGCTACGTT
AGCCATAAAGCTAATGCGATTATGTTGGATTTAGTAGGAAGATATGtaag
aacatttgaaaatcatttctaTATTATGAACGAGTTACTCAGTTATGGTA
AAGTTCTGGTGTATTCGAGAATGACTTTGTTCAATTCAAGCGATGGATAT
TCAACAAACGTTTTGAAGATCAAAAGACAAGAGCAGGGATTCGGATTAGt
aagattttgatgaagaacGCCACACCTTTTCCTTCTCCAACCAACCACAT
TGTGTATCAAGCACCGACAAAGTAAAAACCAATCAATGACCAATCAAAAC
ATAATAACAagccaatcaaaacaaagtttataTTTGTTGATTAGTGCTCA
CTTCACCTACCCTGAACACTGGCTAATAGCAAaaattatttactttttct
ttttttttgtatttttttgcaatttttatttttttgcatttttcattttt
tactttttattttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024844-exon-sc0000511-1491911889:119752..120866 | TCONS_00024844-exon-sc0000511-1491911889:119752..120866 | Clytia hemisphaerica | exon |
| TCONS_00024844-exon-sc0000511-1510915933:119752..120866 | TCONS_00024844-exon-sc0000511-1510915933:119752..120866 | Clytia hemisphaerica | exon |
| TCONS_00024844-exon-sc0000511-1575043694:119752..120866 | TCONS_00024844-exon-sc0000511-1575043694:119752..120866 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000511 | supercontig | sc0000511:119752..120866 . |
Blast
The following BLAST results are available for this feature:
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