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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024762 ID=TCONS_00024762|Name=TCONS_00024762|organism=Clytia hemisphaerica|type=transcript|length=680bp
AAAACTATCTTATCTTCATGTTTGAGGAACATTTTTCAGCACCTGTCTCA
TTTGTAACGAGatgtcaaaataaaatgattggGTTAAATATAAAACAACA
TTTCGAAAGATCAGGGCCTGATCCTTTGATTTTGTACCAAGATTTCATCA
GAAGTGtctATTGTACTGTGTGAgctgatcaatttgagagtgcAACAAGA
ACAAGATGATGAAGTTGCTGTGTCTCATTCTTTCCATTGGATTACTCATC
AACATTACAAACGGCGCAAAAGGTCCACAAAGTGCACTGGAGGAATGCat
caatgaaatgaaagaatgtCGAAAAAATCAGAAGCTTGAGAAAATCAACG
ATGGAGAATGTGATGTCGGATTTCAAATCTGTGAAGAGTATTTCATGAAC
ATTCCCGAGGCTGTCAAGGATTAACTGGCCCATGCTCGATCATTTTAGaa
taaaattgtttaaaaaaaaagttcggTATTTTATTGTAAAGATGTTTTTT
AAAGATGTTTTTTATTAAAGCAACAtgtttgataattttgaaaataaata
tatttccCTTTAAGAGcactaaaatatatttttcaaatgaatttttactt
gaatttaATATTAAATGCAAACCTTACATATACCTTAGACTAACCAACAA
CTCTACTAGTAAGAAaggtaatacacgttt Run BLAST on NCBI transcript from alignment at sc0000510:16536..18547+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024762 ID=TCONS_00024762|Name=TCONS_00024762|organism=Clytia hemisphaerica|type=transcript|length=2012bp|location=Sequence derived from alignment at sc0000510:16536..18547+ (Clytia hemisphaerica)
AAAACTATCTTATCTTCATGTTTGAGGAACATTTTTCAGCACCTGTCTCA
TTTGTAACGAGatgtcaaaataaaatgattggGTTAAATATAAAACAACA
TTTCGAAAGATCAGGGCCTGATCCTTTGATTTTGTACCAAGATTTCATCA
GAAGTGGTAGGTAGTAATGTGATTTTGCCTTGGTCAAATTTCTCGCAATG
TTTAGTCATGAAGTTGTCCCTGGAGGCTAAGTTTAAAACATATTTTGTAA
TATTGCTGAAAGGTTCAATTGGAAATTTTTAGTAGGGTCGCCAAATCCAC
TAAACTGTCACCTTTTTGGTTATTTCTATTTTCTGGGAGTGGCACGTCCC
GGTCGTGGGCTACATAACATTGAACACTAatactaattttcattttgaag
gtgATACTGGACTCCCCCGGGACTGGACTGACAATAACTATCCGAACCAA
CAAACCTACTTTGTTTGAGACGAGTTGATTTTTTTCCAGCGGCAACAACC
GAAGTCTGTTCACCTCTGTAATTGACATTCCTCAAAAAGTTAATTATTTC
TTCCCACCAGCCCAAAGCcctttaatttctttttgatttttagtctATTG
TACTGTGTGAgctgatcaatttgagagtgcAACAAGAACAAGATGATGAA
GTTGCTGTGTCTCATTCTTTCCATTGGATTACTCATCAACATTACAAACG
GCGCAAAAGGTCCACAAAGTGCACTGGTAAGAAGGGAATTTCTCACAGCT
TCCACTACCCCCGGTTCAAATGAGAATTTATATTTATACTCCAGTGAAAA
GATTACTCAAGTGATGATTTTACTtctgttttgctttttttcggGTACGC
TGTTTTAGGGCTCCCACTTTTAACGAAGGGCTTTTAACAATGGTTACAAA
TATCTATAAGTCCATTTTTCACATTGCCAATTTTCCACAAGTGATACAAC
GGTGTCTCAAATACTGTTAAGCAGCAACTAGACTCCATAAATAAGAGGCT
GCCCTGTGGAATGAAAAGAACCAAGAATACTTTCCCTGACTTTGAGGAGC
ACAAGGCTCTTGTCAGGCTATTTCCAGTAGTGATAAATAAATCACAATTT
TATCATAGGTGTTTGATGGCTTCAGAGTGATCCACTACAACCCACTACAA
CTAGATGCTTAAGTTTGGCCTCCTAaactttcaaactttgaattttgCTT
ATTTCAAATACGTATTCAGACATCTCCTTtagaaaaatacaatatttcaa
aatatagaaACTGCTATTACCGATCTTTTTGGAataaaatcttgcaaatt
tgtttgatgaggcccccagcggtttacgtgatggcgtgataggcgttttt
tcaagttcgtgatttcgtgatttgAGATTTTGAAGTGAGTGATTGTGTGA
TCGGAGGGAAAAgatagaaaggaaatttaactcgTGATAACGAAGTTTTT
TTGGCGTGACCAACGTGTTCAACGTGATCGTGGTAGAAAGCAAATTTAAC
AcgtgataacgtgatttggatttttttttgcgtgatttgaaaggtgactT
GGGAGGGGGCTCTTTGATTTTAGTGATGGAGAAAACCCCTTGTtatatat
ttacatttttttgttctATAGGAGGAATGCatcaatgaaatgaaagaatg
tCGAAAAAATCAGAAGCTTGAGAAAATCAACGATGGAGAATGTGATGTCG
GATTTCAAATCTGTGAAGAGTATTTCATGAACATTCCCGAGGCTGTCAAG
GATTAACTGGCCCATGCTCGATCATTTTAGaataaaattgtttaaaaaaa
aagttcggTATTTTATTGTAAAGATGTTTTTTAAAGATGTTTTTTATTAA
AGCAACAtgtttgataattttgaaaataaatatatttccCTTTAAGAGca
ctaaaatatatttttcaaatgaatttttacttgaatttaATATTAAATGC
AAACCTTACATATACCTTAGACTAACCAACAACTCTACTAGTAAGAAagg
taatacacgttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024762-exon-sc0000510-1491911889:16536..16691 | TCONS_00024762-exon-sc0000510-1491911889:16536..16691 | Clytia hemisphaerica | exon |
| TCONS_00024762-exon-sc0000510-1510915933:16536..16691 | TCONS_00024762-exon-sc0000510-1510915933:16536..16691 | Clytia hemisphaerica | exon |
| TCONS_00024762-exon-sc0000510-1575043694:16536..16691 | TCONS_00024762-exon-sc0000510-1575043694:16536..16691 | Clytia hemisphaerica | exon |
| TCONS_00024762-exon-sc0000510-1491911889:17129..17261 | TCONS_00024762-exon-sc0000510-1491911889:17129..17261 | Clytia hemisphaerica | exon |
| TCONS_00024762-exon-sc0000510-1510915933:17129..17261 | TCONS_00024762-exon-sc0000510-1510915933:17129..17261 | Clytia hemisphaerica | exon |
| TCONS_00024762-exon-sc0000510-1575043694:17129..17261 | TCONS_00024762-exon-sc0000510-1575043694:17129..17261 | Clytia hemisphaerica | exon |
| TCONS_00024762-exon-sc0000510-1491911889:18157..18547 | TCONS_00024762-exon-sc0000510-1491911889:18157..18547 | Clytia hemisphaerica | exon |
| TCONS_00024762-exon-sc0000510-1510915933:18157..18547 | TCONS_00024762-exon-sc0000510-1510915933:18157..18547 | Clytia hemisphaerica | exon |
| TCONS_00024762-exon-sc0000510-1575043694:18157..18547 | TCONS_00024762-exon-sc0000510-1575043694:18157..18547 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000510 | supercontig | sc0000510:16536..18547 + |
Blast
The following BLAST results are available for this feature:
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