TCONS_00024636 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024636
Unique NameTCONS_00024636
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2680

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024636 ID=TCONS_00024636|Name=TCONS_00024636|organism=Clytia hemisphaerica|type=transcript|length=2680bp
GTTCAATGATAAACTAAGATGGCGGTCAGAAAGGGCGAATCATCGAGTGA
ACGTTATGATTTTTTCCGATCAGATTACCGTTTATTGGTGATGTTGAAAT
ACATATACATTGGAGGTGCTGATATCGGTTTTTGGTGGTCCGTCTGGCTG
CTGTCGGATTTTTACCGTCCCATACAAACATATGGTCTTTACTCCTATCT
ACGTGGATATGGCCTCATCATTTTTGCCAATCTCTTGTATTTGATTCTCC
GTGTAGCATTCAAAGATACTTTCAGCGTCTTTTGGGAAACTCATCATCGG
TCAGTATACCCGACAGCTATCGTGACATACAAGAGAGTATACCAAcaaaa
gagtttgaaatttcgcCTCATCAAAAAGACCTTTCCGATCTGTATCTATA
TCCTAGTTATTGGTTTCATACAAATATGGAGAGGTTTGTTCGCCACTTTT
GGAGTCCTGATTGATTTGCTGCACACCAAGTATTCAGTGAATCCCATCTT
GAGTTGTGTTGTAGCACAAATGTTTGTGGCCTTGACGTTGGCTTTCACAC
AGAAAAACAATGCCATCAATCTTTGCCCTACACACAAAATGTACAAATAC
GATGAGTTATATTTTACAGATCATTTATTCTTTTTGAATCTTTTCGGAAA
TTTTCGTCAACCGAAGCCTTCAGAAGTAAGCCATCAAGCACCCGAAGTGC
TTGAACATTTCTGTGAGACAATACAAAACCCAAACTTTCTTGATGTACCT
GGTACACCAAACCTTTCAGCTTCCCGTCTGTCAGATGGTGATTTTGACGT
GGTGGAATTTGCGACCGCGCGACTGATCAATGCACTTCAACGAAACCGTT
TACGAGAAAAGTTCAAACAGTCTTGTACTAGTCTATCTTCATTGCGACAG
GAAGGTGAAAATTTTGATCCTGTTAACACATGGAAAATGGTGATCCAACT
TGTACTGGAAAAACAGGAATTCGAAGAAGGGACtaaagtgacgtcatcaa
agaaAATCTCCCTTCAATCATCTAGAAAGATATCAGTGCATACAAGGGAA
ACAAAAAAAAGTCGTAAAATATCGAGCGTCCTTGTGACGCCTCGATCTGC
ACCACTTACGAGAAAAATGTCCACAACTCACGATGCACCTCAAGAGACCC
ATAAAGCAATGCGAAAGAGCAACCACTTATCCCCTTTTGACGCCATGCCT
GGTGGTGGAATCCGTGTCAATGTCAGAGCGTTGGAAGCTTTGCAGAGTGA
TTCTAGCTCGGATGAGGAACTGGCTGCCTTGGAAACCAAGGACCAATCAG
ATGATGAAATAAAGACCAGCACTATGGCAACCGATCAATCTCTACATACA
ACAACAACCAAGGTTGAACAACCTTCTCATCCCAAAAAGCGATTAGCATC
ATCACTCAAAAGACCTCATGTGCCAAATCTTTTACAGAGGGATAATATAG
TAACACTGAGAGAAAGATACATGATCAAGTTTTTCGGTTGGCTGTATGCT
ATCCATCATCGACAAGTTTTCCTTCATATTTTTGGTGGGCTTTTCTGGAG
CACAACATGGAAATTGTTCGATTTCGCAACAGAATCCATTTTCactaaaa
ccgcaagtgataTTCCAGGACTCGTTTTGATTGctattttttgtcattct
atgaACCATTTGGTTTTGTTTCGATTCAAAGAGATGGCTACGAAGCTTCA
TTGGAAAACATTTTGGGAATTCTTTTGCGGATTGTTCACAGTCTGTCTTT
GGGCACCAACTTGGTATGTGTGGGATGTCATAGCAGAAGCGACAGGCTAC
AAGTTGTATTTTCAAATTGGAATACATGTGTTGTCGTTCTTCAGCTTGGT
GTACTTCAACGTCTCCATAAACCTCGCTCTTTGATCAACGTTTTCCAGTG
GACGTTTTGAAGTCAAAACATGAAGAAAACGGAAAGGATAGATAAAAAGG
ACAAACTCGAGGGAAGTTTATGAAATATCTTTTAAACTAAATCTTCAGTA
AATTTAAAGTAGATTTGAAGTTGTAAAGATAAAATAGAATTTGTAGTGGA
TTTCTTAATTAACTAGGaagattttatttaaaagaattgtACATAATTTG
AAACATTTAATTCTTTGGTAGATTAAATTATTtctctttattagaaaaat
atcTGACATTCTAAGGGATCACAAAAACCTCTGTGATGATTGAATTCTTC
TTAATATGGTTAGTGGCAAAAGCACCAGGAGCACTGCCTTATGAAAGTGA
ATGGTATTTTGTACTTATTTTTGGATGTATCACCGATCGTAACATGATAA
GATTAGCAATTTATATTTTGACCAGGAAAATCAGATTAGtggttgaaaat
ttcttttgattcccGACCAAGTATAAAGAATGTCATTTTGAAGGGTCGAA
AACAATGTCAAAAGTGACGCGTGTCAAGATCGACTGTCATTTCTCTATat
ggcaaaaatatttgaatggacacatttttcaaaatttcaagactttttaT
CATGTCcgaaaatcatttaaaaagaacCAGGAAAAATATactttcattca
attttttgatatgAAACTTACAACTAGGTTTAAGGACGTAATGCATCAAA
AAAATTGTATCAAAACTTATCGAAAAAGAACTCTGAAATAAATAAAGATC
AGACCGAGAAGTTATGTAAGAGTCTTTCTT
Run BLAST on NCBI

transcript from alignment at sc0000506:172501..184685+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024636 ID=TCONS_00024636|Name=TCONS_00024636|organism=Clytia hemisphaerica|type=transcript|length=12185bp|location=Sequence derived from alignment at sc0000506:172501..184685+ (Clytia hemisphaerica)
GTTCAATGATAAACTAAGATGGCGGTCAGAAAGGGCGAATCATCGAGTGA
ACGTTATGATTTTTTCCGATCAGGTATAAATTTCAATATTCACAGACAGG
GTTCCCACTAGCTATTACCAAttattttccctgactttttacTAAAAAAG
TGGTATTTCTCCCTGACAAAAACGCTAAAGTAATTTTTCCCTGACTCTGA
ATGGAAAATGACATGTTTTTCCCTGCGACCATCAACACTTTCACGTTGCA
GgatatttctttttgaaagttgAGCAATTCAAGGTCTTTTGAAGTTGGTT
GTCGTGTATTTTTCATTAACTGGAAGGAATCGTCATGGTTGGGTGCGAca
cagaaaattttgaaaaatagagaCTATTAGATTAGATAGAAGCCTTCTGA
TCTTAAGCATTTATAAAACAGAATTCCCTGACTTGGAAAGACATAATAAA
ATATTCCCTGACTTTTCCAAGTTTCCCTGACCAGTGGGAAACCCTGCAGA
ATGAACAAGGGGGATATGAGAAAGGAGCAAGTTACAAAACTCGGAGTAGC
AGTAGATTATTATAACAAGTAGTCGAAAATAACATTATCCTAATCGTCAT
TCTTGTTAGAATTTTTTTGCTAGTATAGggataaaacaaaaagaaaatca
caAATCTTTGATAGGCAGGGGTTTCTAATTTAGTGGTTtctgaaaaagat
tttgtttccCGTTTGGGATGGGAGCCTTATTTAGTTTTCAACAAGGATGA
ATATATATACTCTCTCAGTGCATCgatttttcgatcaattttccagtgag
gaGGGAGTCGAATCAGGAAAAAGGGGTGTTTGTTAAACCAAACTTGATCA
TTTTATTCGTTACTTTTGCTTTTAGATTACCGTTTATTGGTGATGTTGAA
ATACATATACATTGGAGGTGCTGATATCGGTTTTTGGTGGTCCGTCTGGC
TGCTGTCGGATTTTTACCGTCCCATACAAACATATGGTCTTTACTCCTAT
CTACGTGGATATGGCCTCATCATTTTTGCCAATCTCTTGTATTTGATTCT
CCGTGTAGCATTCAAAGATACTTTCAGCGTCTTTTGGGAAACTCATCATC
GGTCAGTATACCCGACAGCTATCGTGACATACAAGAGAGTATACCAAcaa
aagagtttgaaatttcgcCTCATCAAAAAGACCTTTCCGATCTGTATCTA
TATCCTAGTTATTGGTTTCATACAAATATGGAGAGGTTTGTTCGCCACTT
TTGGAGTCCTGATTGATTTGCTGCACACCAAGTATTCAGTGAATCCCATC
TTGAGTTGTGTTGTAGCACAAATGTTTGTGGCCTTGACGTTGGCTTTCAC
ACAGAAAAACAATGCCATCAATCTTTGCCCTACACACAAAATGTACAAAT
ACGATGAGTTATATTTTACAGATCATTTATTCTTTTTGAATCTTTTCGGA
AATTTTCGTCAACCGAAGCCTTCAGAAGTAAGCCATCAAGCACCCGAAGT
GCTTGAACATTTCTGTGAGACAATACAAAACCCAAACTTTCTTGATGTAC
CTGGTACACCAAACCTTTCAGCTTCCCGTCTGTCAGATGGTGATTTTGAC
GTGGTGGAATTTGCGACCGCGCGACTGATCAATGCACTTCAACGAAACCG
TTTACGAGAAAAGTTCAAACAGTCTTGTACTAGTCTATCTTCATTGCGAC
AGGAAGGTGAAAATTTTGATCCTGTTAACACATGGAAAATGGTGATCCAA
CTTGTACTGGAAAAACAGGAATTCGAAGAAGGGACtaaagtgacgtcatc
aaagaaAATCTCCCTTCAATCATCTAGAAAGATATCAGTGCATACAAGGG
AAACAAAAAAAAGTCGTAAAATATCGAGCGTCCTTGTGACGCCTCGATCT
GCACCACTTACGAGAAAAATGTCCACAACTCACGATGCACCTCAAGAGAC
CCATAAAGCAATGCGAAAGAGCAACCACTTATCCCCTTTTGACGCCATGC
CTGGTGGTGGAATCCGTGTCAATGTCAGAGCGTTGGAAGCTTTGCAGAGT
GATTCTAGCTCGGATGAGGAACTGGCTGCCTTGGAAACCAAGGACCAATC
AGATGATGAAATAAAGACCAGCACTATGGCAACCGATCAATCTCTACATA
CAACAACAACCAAGGTTGAACAACCTTCTCATCCCAAAAAGCGATTAGCA
TCATCACTCAAAAGACCTCATGTGCCAAATCTTTTACAGAGGGATAATAT
AGTAACACTGAGAGAAAGATACATGATCAAGTTTTTCGGTTGGCTGTATG
CTATCCATCATCGACAAGTTTTCCTTCATATTTTTGGTGGGCTTTTCTGG
AGCACAACATGGAAATTGTTCGATTTTGCAACAGAATCTATTTTCactaa
aaccgcaagtgataTTCCAGGACTTGTTTTGATTGccattttttgtcatt
ctatgaACCATTTGGTTTTGTTTCGGTTCAAAGAGATGGCGTCGAAAATT
CATTGGAAAACATTTTGGGAATTCTTTTGTGGATTGTTTACAGTCTGTCT
TTGGGCACCTACTTGGTATGCTTGGGATTTGCTATTGAATTCTATAGGTG
AGTTAACGCGCACTTCTTCCGCAACATTCATTGAATCACTGCATTTTTTC
CCGAAATCTCATCCCTTCTTCACCACACCCGTGATGAATGAGTCTGATCA
CGTAAAACGGCAAAAACTCGGATAacacgcatccctttgaaaaagtccga
AGCGagcatcacggctcaaaaatctttcaaatcacgatcgtGTTTTGACC
TctaatcacgcaatcacgaagaaaaGATTtacaaatcacgtaatcacgcc
agaaaaaagtccctatcacggCCTCACGAAAATCAATTGGTGGCCTCATG
AACAATTAGACTCCGGGAAAGATATTTGttctgaaatattttgaaaagcc
TTTTTTTTCTCGGAAACAAGGCTCATGGATAGGACAATATTTCTACACGT
ATGGTTAGGATTTGCGGTAAATCTCTTATTATCTTATTATCTGTTGTTCC
TGTTTATAAAAAGGGAGAGAAAAGCATTGctaaaaactacagaccagtgt
cTCTCCAGTGTTTAGCAAAGTATTTAAAAAGTGCATTTACGATGTACTTT
ACAAGTATTTTGCAAGCAACAATCTCTCTACTCCGTGCCAGTTTTTGGGA
GAGTGATACTTGTGTCTCTCAGTTGTTGTCCATAACGCATGACATCTTTA
CAGGGTTTGACGCTGATCCACCTTTGGACAAGAGGGGAGTGTTTCTTGAT
ATCTCAAAGACATTTGATCGAGTCTGAAATGAAGATTTAATCTATAAACT
CCAGTCTTATGGGGTAACTGGTCCCTTGCTTTcccttttgaaattttctg
tcgAGTAGGTGTCAGAGAGTTGTTTTGAATGGAAAGACCTCTGAGTGGAA
ACAAATCAAGGCAGGAGTTCCTCAAGGCTCAATTCTTGGTCCACTGTTTT
TCTAATCTACATCAACGACCTTTCCAACAATCTCGAGAACAAGCCTAAGA
TCTTCGCTGATGACACATCTTTATTTTCGTTAGTGATTGAACAACTTTTG
AGCAGTGAGGAACTAAACAGAGATCTTACAAGTGAGTGGGCtcgtcaatg
gaagatgtcttttaatCCTGATCCTACAAAACAAGCTGTGGAAGTTTACT
TTTCCAAAAGGCTCTTACCTGCTAATGCTCCTGTTTTATCTTTCAATAAT
GCTGACATAAGAACTGGTGAATGTCAGAAACATCTAGGTCTTCCTTTGGA
CTCCGAACTCTCGTTCAGCCACCATTCAGACGGAAAATAAAAAAGGACTT
CGCAAACATATACCAAGAAAATCTCTGCTTACCTTATATAAATCTTACAT
TAGACAACACTAAGACTATGGGGATATCATATACGACCATCCCGGAAATT
CGAATTTTGAGCGTAAGCTTGAATCCATCCAATATAATACCGGCTGTGCT
ATAACAGGCTGCTTTCGTGGAGCGTCTTTAAGAAAATCTTTATTCTGAAC
TTGGTCTCGAGAGTCTTGCTGatcgttttttaattttgaaaatttagccc
cttcttatttacgtaactacttACTAGCAAGACTTGCGGCACTAGATAAt
ctaagaacaagaaatcctatttatccacTTAATATTCGAACTGAGCGCTT
CCGAGATTCTTTTTATCCTTActgcatacacgttttttttttaagaaact
agttttaccaagcagcctcaatgtttcttaagaaatcggccttttgagcc
ttaaatgtttcttacatgtttctaaactttttgacataatcagcctcatg
gaaggctggattggaaggttattaaaaaaaaaacgaataaaaaatgttat
tttctcattctcagcctcagcatgtttcttagatgtttcttagtttttag
gcattctgagcctcatgtttcttaaaagtgtgtttctaaagaaaaaaaaa
cgtgtatcacaGTGGAATACTCTGGATGGTAGTATAAGAGATCTTCCTTC
AGTATCtaccttcaaaaaagcaatcttcAAGTTTCTAAGGGCTAAACCTT
TCCTGTTTTTGGAGCTTGTGACAACCAGGGTGTGGTCCATCTCGATCGTA
TTCGAGAAGGATTTAGTCACCtcaatgaacataaatttaGACACGGTTTT
CGTGACACCTTAGATCCTTTTGTGCGTGTAGGAcaaattccatcgaaaac
acTCGACACTTTCTTTTGCACTGCTCTATTTACTCTCAGGCAAGACATCT
TTTGTTCAACAAACTTCAGAACCTATATTGAGCttccaaaagcgcaaaaa
ctggacaaaacagctgtttctgtctgaaaaacactgtttttaagggttaa
tatctcgaggtacagaaatcacctatatttgcaatatatctctaatctta
attttttgagagctttccaaaaatacacaacaggtctccgttttctcaag
ctaaaattttcattgatttctcaccctatgatttttgcctgagaccgtcc
gtcgtatttgtccgaaaatcacaccaaagtgtccgaaaaaaaattggcaa
ccaagttattttgattcccctaccccttagctttcaaaaaatgtataaca
agtgctttgactaaaaaaatcgagcgatttaacaaatttccccctactac
taGACAACCTTTCAACATAAACAACTCAATAATTAATCTTTCCATTGAAT
TTGTTCTTGACTCTGAGAGGTTTAGTGGTGCCTTATCTTACTTTCTTATT
TTAGTTCGAACCCCCatccgtttatttggaacctaagaacAAGTGTAATG
TAGTTTCTCAGATTGtaattgtaaagaaaaaaatggacTTCTTTGAATTT
CTGATTTATTCTTTTATAGGTGCAAGTTATATGGAAGAAGTTTGTTGGTC
TTTGAACGTGTTGGCATTCCTGCCGTTAGCATTGCTTGGTTTGTCTATAA
ATACTGCTTTGtgatgtttctttttatattaGTTTGTGAAAATAATATAA
TCATTTGAAAAAACTGTTGAATTAGCGCTAAAAGGATATTTAATGTTACT
TGGTTGGtatgatttgaaagaaattaggCAACCACAAAGTGCCAATTGTA
CAAAAATGCTAAGTCTACTTCTACACTGGCGCCCTTTATTTGTAATAAGT
GAAAGAAATTGTAcacccgtgtcacagacccggtttctttcccggtggaa
aaataggccaaaaaatcgtccccggtggaaaaaacatcctacaatttcaa
ccccactgcgaaattgctctatgattttatccccattgaaaactgaatgt
gaaaaattgcactcaaaaaccatccccactggaattttcgagctggaaac
aatagattttctatccccattggcattttgatagaaattttcatccccac
tgagggaaaaagttctaccggggcactgagagaGGGGTGTAATTGTAAAT
TTGGGATTTCCTTCTGTAAAGAACTTTAGAAATATGGACCAATATAATCT
CACCCTTAAAGCGAGATAAATTTAGAACGCCAGGTACAGCGATAAATAAG
CTGCCAATCTCGTTCCCGTGTaccgtaatttctctaatttaatacgTCCT
CTAATTAATGCGAGGAaattattttcgtcattttgaaCTAATTTAAATCC
GCTAATTATTAGTGCGAGCACCCATTTACCTACTTttgattttcctctaa
tttaatacggtaaagttcaaattttcctctaattatagTACGAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcttttttatttttcct
ccaATTTAGCGCGCCTTTACAAAGTTTTTCCTCTAATTATTAGTACGATA
AAAAGATTCCAGATTCAGAGCAATTTATATCCTCCTATTATTAGTGCGAC
Acctccaaaataattatttttttggtcgtattaaattagagaaattacgg
tatcccaggctttatttacgttactaaTTGATGACAGAGAATGcccaaaa
agctgataatacgcagggaacgaggttgataAGCTGCTTGATACGCCAAA
TATAGGAAAGAACAGATTGCAAGCTTCAGAAACTTTTTGTTGTTATCAGA
TGGTTTTTACTTCAAAGTTTGTGAGTATGCGAAATGTgcgaaatgaaaaa
aactttaatacATGGAGAAGCGATTGGTTTGGGATTGTGGGTCGGTTCGA
TTCAAATCTCACCATGTGGTCCTCATACAATAATTCACATCGCTTTTTCA
AACGTCATTTTTTATccctttgaagtttttccctTTTTGTCCCAAACTTT
TGTTCAAAAATCAGATTCATATAACTAACTCTAGCTTTTCATTCAATTTC
TTGATACTAACGGCACTTATACATTGTCATTGGTGTTAAAACACTGACTT
TTATCTTATAATGATATGTAAAAACGGTTTTTATACGGAACCGAACACTC
CTAAAGTTTTGAACATTTCCCTCTTTTTGACGAAATCTTTTTTATCTAGT
GAGTGTGTCCAGCCCCTGtcatctttttataaaaataaaatttatataaa
ataGTTGCCCGGGAAGAGGAATAAAAAGTGACGTCATCTTTTGTCTCTCA
ACAAGATGAGATAGTATAATgcatcaaaaatcaaaacaaaaatttaaaat
atctcaaattaaATTCGGTATTTTGGAAGCTGGTAACTCAAGATGCATGG
GACCAAAAAGAACGATGTTGACATCAAAATTTCTACAGGTAGGAatgtga
atttccctttttctgaCGGTGAACATTTTTCTGATGGTGAACATTTTTCT
GATGGTGAACATATCTATGATGGAAATTGAAAAGAGGCGTCCCATCTGAC
CACCTCTcagcaaaaaatcaaatgataaaaCCGTTCGATAACTTGATTTC
AGATAGGGGGTATACTCTCTTTACAGCGATTATACTTTGATAAATGACTG
TGTGTAATGCTTCCATCTCACGAAATCGGCTTAGTAAATATCGATTCTTA
AATATCTTATAATGGTGCtgacattttgatattttaagtGGAGTACTTTT
GCACCGATCAGTGACTTTATAAGAACCggcaaaaacaaaatttgtcagtc
agtgatgttttcaatttttcgaccTTTCGATATTTGATGAACACGGGTCa
catttcaaatattgtttCAGCCCCATTTATCGGGGAGATGAGAGTCATAG
AGTGATTCGAATATCGGAAGGATAGCTTGCAGCGAGAATAAGGAAGTGTT
TTGAGGCATTCATCTAATGCATGGTGCCTTTAATGAGATACTTAATGAAA
ATTAAAGTATTTATACATTCAATTAATTAATACTACCGTAATGGAATCAC
AGGAAATAAATGATAATTGGTTGGATGTCTAATATCTTACTACCGGACTT
CAACTTCTAGTTGTACCGTTGTTTTTATGAGGTATACTGAATGAGAATAC
AAATTCTAAACTATCACACATGCGTGTTTAATGGGGTGTTTAGTTACAAG
ATGGTTCCCCGGTAATCACTTAATTATCATCGGTCCGACGAAAACGCTCA
AAGGGGTTTATTTCTCTTTAAACTAACATCTTTCTTTCACCCTCATGTCA
TAAGACCATCAAATGacgttcaattttcattcagatGTCAAAAATAGGGT
CTGATAGTCTTTCAAATGAGAGGTTCATTCATACTTTGAAATGTTAATGT
ACCTCAAAACATGAGTTTGACGAAAGAACGCAAGAAAAAAGGCTGTTTTC
ATGCCAAGAAGTCATCAAGAAAAGGCGGGGATGCTTTTTGGAGAGATTTt
ctcagatttaaaaagattaagATGAAAATCGTCTTTAGCCTCAGTAGGAA
GACTGCCCATCTAGCCTTCTTTATAAAGCCGTTACACAGTTTCTGCTTAA
TGACATCTCCACAtcaattttatggattttaatTAATCAGGAGAGATACT
GTAGGATGCGTTCTTGAGACATGCCACTAGACCATGGTAATTTCGAAGAT
AAAAATGGGTGGGTTCTCTGTCAATTTACATCTAATTAAGTACAAGAATA
TTAGCTAATTCAACACCCTTTTCTCCCTGAATAAAAGATATGTAGCCAAA
GCGTAAGGAAACCTATCGAAGAAGTAAATTGTGCTAGCAAACATTGGCTA
GGTCCTCAGTCAAAAATTGCaccccatttgatttgatttcataCTTTTCG
ACTTAACAATGTGGTTTAATAATGAAGAGAGTTTGATCGAGTGTAAAAAT
TCCTGTATCCATATGAATTCAATAATAAGTTTTTGTCAACCTTTTTCAGA
TTACCGTTCATGGATTTGGTTCAAATATATTTACATCGGATGTGCGGACA
TCTGTTTCTGGTGGACAGTATGGAACATTGCAGATCATCTATGGCCTATG
GACATCACTACAGACGGTGCTCTATCGTATGTCCGTGGTTACATGTTGAT
CATAGCTGCCAACCTCTACTACCTGCTCCAACGATTACTGTTTCGCGAGA
CTTGTCATAAGTTTTATGAAACACGTGAGAAACATTTACATCCAGCATGC
ATTGTAACAGAAGAAGAGGTCATCCGAAATAAACCGATTCGGTTTCAAGT
TTTGAAGAAGGTGTTGACGTTAATGATATGGATGGTGGTTGTGGGGTTCA
TTCAAGTGTGGCGTGGATTGTTCGCCACTTTCGACTACGTTGTCGATTTG
CTACACCTTCATTTCGATATCAACAAGATCTTGAGCTCTGTCATCTTTCA
ACTGATTGTAGGAATAACCCTGGCCTTCACACAAAGAAACAATGCAGTCA
ACTTGTGTCCAACACACAAGATTTATAAGTATGACGAACTGGAGGAAATG
GATGGCTTGTTCAGTCtccatgtttttgaaaatttgttgttGAAAGACGA
TCAAAAAACTAGCAACACTCGAAATAGCAAAATGGAGATTAAGGAAGCCC
AAACATCAGTTCCTCCtcctccaccaccaccacccACGAAGAGTAGAAGG
AAATTTTCTCCTTTAAATTCTGGTTTTGATCTTCCACAATACGCAGCACG
TAAGATTTCCGGACAACTTCATCGTTCGAGCAGCACCAACAGCCTGTATT
CACAACGAAAAGCCTCACAGTCATCAAAGAACTCGGACATGAGCTCAGTT
GCGTCAACCGTATATCAGGACAGTACACCACCATCTTGTAAAACGTCAAC
CTCTAGTTTACAATCAACCGAGTCAACAGAAGGGCGAAAAATGTCACGTG
TTGAGTTAGACTTCAACGagaagaataaaagaaaaatcagcaCTATGTCA
TTCTTGAACGCCCCCTCGTTTGAAATCATTGAAGAAGAGCAGCACGAAAA
CGAGGCCGGAAACTCGTTCCCAGACCAAACGATGATCGGCATCGACAATA
AGAATTTCCTTAACACTGAAGTTGAAGATGAAATCCCGATGCACAAACTG
AGTGAACAATCAAATACCCTTTTCATAGATCTTAAGGATATACAGGACAa
caataaagaagaaaatgcTGACGTTGCAGAAGCAGCCTGTGATATTTCAT
TGGACGTGATTGGAGGCTCGTCTACTGAAGAGATGTCAACATCATCTGAA
AGCTTCATGCAACACGTGCGACGAGCAAGTTTCCGAAGACGTGTGCACTT
TGAAGAGCTCGATGATAAAGACTCAGTGGACTCACTTGATTTGAATGCAA
CAACGGGTACTGAATTTCGTTACAACCACTGCAAGGTATGCTTGTTCATC
AGTATTTTGACGTACATATACACTATCCACCATCGACAAGTATTCCTTCA
TATCTTCGGTGGAATGTTCTGGAGTACAACATGGAAATTGTTCGATTTCG
CAACAGAATCCATTTTCactaaaaccgcaagtgataTTCCAGGACTCGTT
TTGATTGctattttttgtcattctatgaACCATTTGGTTTTGTTTCGATT
CAAAGAGATGGCTACGAAGCTTCATTGGAAAACATTTTGGGAATTCTTTT
GCGGATTGTTCACAGTCTGTCTTTGGGCACCAACTTGGTATGTGTGGGAT
GTCATAGCAGAAGCGACAGGTTATTAACTTATTTGACTATCGTCTAAACA
ATTCTTCAAATAAGGAACCTCAATCAAGGGAAGGGAAAATGGCAATCCAA
TAAGAATTGATGAACTAAGCGCTAACAGTAGAGAGGTTATTTCATAGTTG
TTTTATTTTCCTTGTTCCCTGACAAGAGAAAGTTGTCAGaccataaaatt
aaaaaaacgcgTGCAAATCTTCTGTCTCGGTATTTTGTCTGTCATCTCCT
CAAGTCCAATGGTGAAAgataaaaatctcaaattttgtttctggtAAGGG
TGAGGATAGAAATATTCTGTGCCCTTTTGATATCGagtcaaattaaaaga
aaacagAACAATATATTCTTACCGTTACACttccttcttttcttttgtag
GCTACAAGTTGTATTTTCAAATTGGAATACATGTGTTGTCGTTCTTCAGC
TTGGTGTACTTCAACGTCTCCATAAACCTCGCTCTTTGATCAACGTTTTC
CAGTGGACGTTTTGAAGTCAAAACATGAAGAAAACGGAAAGGATAGATAA
AAAGGACAAACTCGAGGGAAGTTTATGAAATATCTTTTAAACTAAATCTT
CAGTAAATTTAAAGTAGATTTGAAGTTGTAAAGATAAAATAGAATTTGTA
GTGGATTTCTTAATTAACTAGGaagattttatttaaaagaattgtACATA
ATTTGAAACATTTAATTCTTTGGTAGATTAAATTATTtctctttattaga
aaaatatcTGACATTCTAAGGGATCACAAAAACCTCTGTGATGATTGAAT
TCTTCTTAATATGGTTAGTGGCAAAAGCACCAGGAGCACTGCCTTATGAA
AGTGAATGGTATTTTGTACTTATTTTTGGATGTATCACCGATCGTAACAT
GATAAGATTAGCAATTTATATTTTGACCAGGAAAATCAGATTAGtggttg
aaaatttcttttgattcccGACCAAGTATAAAGAATGTCATTTTGAAGGG
TCGAAAACAATGTCAAAAGTGACGCGTGTCAAGATCGACTGTCATTTCTC
TATatggcaaaaatatttgaatggacacatttttcaaaatttcaagactt
tttaTCATGTCcgaaaatcatttaaaaagaacCAGGAAAAATATactttc
attcaattttttgatatgAAACTTACAACTAGGTTTAAGGACGTAATGCA
TCAAAAAAATTGTATCAAAACTTATCGAAAAAGAACTCTGAAATAAATAA
AGATCAGACCGAGAAGTTATGTAAGAGTCTTTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013835XLOC_013835Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024636-exon-sc0000506-1491911889:172501..172573TCONS_00024636-exon-sc0000506-1491911889:172501..172573Clytia hemisphaericaexon
TCONS_00024636-exon-sc0000506-1510915933:172501..172573TCONS_00024636-exon-sc0000506-1510915933:172501..172573Clytia hemisphaericaexon
TCONS_00024636-exon-sc0000506-1575043694:172501..172573TCONS_00024636-exon-sc0000506-1575043694:172501..172573Clytia hemisphaericaexon
TCONS_00024636-exon-sc0000506-1491911889:173376..174858TCONS_00024636-exon-sc0000506-1491911889:173376..174858Clytia hemisphaericaexon
TCONS_00024636-exon-sc0000506-1510915933:173376..174858TCONS_00024636-exon-sc0000506-1510915933:173376..174858Clytia hemisphaericaexon
TCONS_00024636-exon-sc0000506-1575043694:173376..174858TCONS_00024636-exon-sc0000506-1575043694:173376..174858Clytia hemisphaericaexon
TCONS_00024636-exon-sc0000506-1491911889:183181..183419TCONS_00024636-exon-sc0000506-1491911889:183181..183419Clytia hemisphaericaexon
TCONS_00024636-exon-sc0000506-1510915933:183181..183419TCONS_00024636-exon-sc0000506-1510915933:183181..183419Clytia hemisphaericaexon
TCONS_00024636-exon-sc0000506-1575043694:183181..183419TCONS_00024636-exon-sc0000506-1575043694:183181..183419Clytia hemisphaericaexon
TCONS_00024636-exon-sc0000506-1491911889:183801..184685TCONS_00024636-exon-sc0000506-1491911889:183801..184685Clytia hemisphaericaexon
TCONS_00024636-exon-sc0000506-1510915933:183801..184685TCONS_00024636-exon-sc0000506-1510915933:183801..184685Clytia hemisphaericaexon
TCONS_00024636-exon-sc0000506-1575043694:183801..184685TCONS_00024636-exon-sc0000506-1575043694:183801..184685Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000506supercontigsc0000506:172501..184685 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	2.41067e-05	0	0.0700595	0.198656	0	0	1.16311e-09	1.89566e-06	0.00353644	0	0	0	0.0134842	0	0	0	0.0840522	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024636 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top