TCONS_00024578 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024578
Unique NameTCONS_00024578
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3527

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024578 ID=TCONS_00024578|Name=TCONS_00024578|organism=Clytia hemisphaerica|type=transcript|length=3527bp
TTTGACTATGAAATCACAACAGCCTCTGAAGAGAGGGAAGGAAACACAAG
AAGAGGGAAAACAAGCAGAGTGGAACCATGGAGTTCACGAAAATGGTCGG
GCTCGTTGCTTTGGTGTTTCTTATTggagtgacgtcatcaagtgAAATTG
TGGAAGAATTCGTTCCAAGTGACGAACATGTTGAACAGGTTCAAGATGTG
TTGGCAAAAACTGGCTGTCCTGGAGTTCGTCTTGAGAGAGTGGGATGCTT
TAATGAACTAACATCGGATGATGGCATACATAGAACAATGAAAGAACAAA
TTTTGAATGGTCGTGACAAAGGATCAGCCGTATATGAAGGACCATTCTTG
TCATGGCAAAACTACCACGATTGGCTTATCAACTTTGCATGCAGATGTGG
TCAAAAGGTTGCTGCCCGTGGAGGATCCATCTTTTCACTACAATTTTTCG
GTGAATGTTGGACAGACTTCCCAAAGGGAAAAGGCAAAGTTGAATACGCC
AAACATGGATTATCTAACGGATGTTATGCCAGTAACTTCGATAAATACAC
TGGATCTCCAGTACAAACCAAATGGTATACCGGTGATCAGAAAACAAACT
TCGTCTACAGAGCTATCCCTATCGTCAAATCAACTACCCCACCACCAACA
GAAGCGGTTCCAACACCCGCTAACGCACAAACAAAGCCAGCACCAACCGC
TAAAACTCTACCACCACCTCCACCAACCGCTGAAACTCCACCACCTACAC
CACCAACAGCTAAAACTCCACCACCACCTACACCACCAACCGCTAAAACT
CTACCACCACCCACACTACCAACTGAACCAAAAACAGTAAAACCACCCAC
CAAACCAGCTACTTGCAAGCCAGCTCATGTTCTCAAAATGTTTCATGCTT
ACACAAAGAAAACTCTACAAAAGACATGGTTTATGCGATTCCAAATCATG
CCTACAGGAATCGTTAGCAGAAAATACGCCAGTATTGTCCACGTGACAAC
TAATCACAACATCAAACACTACGGTAGCCGAGTTCCAGGAATCTGGTTCC
GACCAAACAGCAACAGCCTTCATATCTGTTCTGCAGTCAACGGCAACAAA
AACTTTTGCTATAACAGTAAACCCCTTGCACAAGGAAAATACACCACCGT
TTTGGTTCGACAGGTGAAACAAGTAAAAGGAAACAAATATCTTTATCAAA
TCTACATCAACGGACGCAGAGTTATgaataaaatcaacaaagacCCAAGA
GTCTTTAAAAACGTTAAACTTTACCGAAGTGACCCGTGGTACCCAGCCAC
TAAAGCTTGCgtcaaaagtttcatttttggTAACATCCGCAATAGAAACC
cacaagCATGCCAAAACgttaaaaaccaaattttgaaaggaCGAAAACTT
CGTGTGTTACCAAAACTTCTCAGAGGATACACCCTCAAATTCAATATCAA
ACCATATGGATTCATCACCAAGAAATATGCAAGCATCTTCCATGCAACAA
CCGGTGGTAACGTCAGAGTTTACGGTGACCGTACGCCTGGAATCTGGTTC
CTACCAAACACAACTCGTTTACACATCTGTTCAGCTATTGgtggaaacaa
aaataaatgtttcaACACAGCTCAACTGGACGAAGATAAATCTTACAATA
TTGTCGTTCGACAAGTCCAAAAgtggaatttgaaatattatttccAAGTG
TTCTTGAATGGAAGGAAGATTGTAGATAAATTGAACACCAaaccaaaagt
tttcaagaATGTACAACTATGGAATGGCGACAAATGGTACAGACCAGCCC
AAGCTTGTATCTCAAAAATCTCGTTCAGAAATATCAAGCACAGAGCTTTC
AGGAGACCAATCAAAAACAAAGCAGTGTTGAGAAAGAAGACTTTACTACG
CGGATGGACATTAACAATGCATATCAAACCAAACGGTACAATCCCTGGAT
GGTCTAACATCTTACATGCTACTATTGGCCAGAACGGCAAAAGATATGGC
GATCGTACCCCAGGTGTCTGGTTCATCTCAAAAACCAATAAACTTCACAT
CTGTTCTGCAGTCAATGGACAAAGCAACCATTGCTTCAACAGCAAACCTT
TACCAaaaaacaaatacaacaaaGTGATCATTCGGCAAGTACAAAAGAAA
GTACCAAACAATTTCCTTAAATATTTCTACGAAATATTCATTAATGGCAA
GAGAGTTAAAAGTATTATCAACAATAAGCCAAAAGTCTTCAAGAATGTCA
CCTACTACATCAGTGATCCATGGTATAACCCAGCCAAAGCCATCCTGAGA
AGCTTGGATCTGAAAATGCACAAACACAAAGAATCGTACGCGGTTAGAAA
GAAGCGCGTTATCATGCgaagaaagaaattattgaGAGGGTGGACTTTGT
CAATGAGCATTAAACCAACTGGTACAGTCAGTGGAtggtcaaacattttc
cacgCCACAATCGGGCAGAATGTCAAGCGTTATGGCGACAGAGTCCCTGG
CATCTGGTTCAAATCAAAGACAAACCAGCTCCATATCTGTTNACCAACTG
GTACAGTTAGTGGGtggtcaaacattttccacgCCACAATCGGGCAGAAT
GTCAAGCGTTATGGCGACAGAGTCCCTGGCATCTGGTTCAAATCAAAGAC
AAACCAGCTCCATATCTGTTCAGCAGTCAGCGGAAAAGTTAACCACTGTT
TTGACAGCAAAGCTTTACCAAAGAACAAATTCACACAATTGATGGTTCGG
CAAATACAAAAGGATAACAATAAATATTATTACCAAATTTTCATCAACAA
CAAAAGAGTTCATAGTGTTGTGAACACAAAACCACAAGTTTTCAAGAATG
TCATATTTTACGCAGCTGATCCTTGGTACAACCCCGCAAAAGCTCAACTC
CGAAAAGTTAATTTCGTCATGCACAAACATCACAGTCACCGAGCtatcaa
gaaaaacactttaTTGAGGACAGAGAAAACTTTAAAGAGAGGATGGACAC
TGAGCTTCGGACTCAAACCAACCGGAGTTAGCAATGGATGGGCTAACATC
TTGCATGCAACAATTGGTAAAAACCTTGGACGCCACGGAGACCGAGTTCC
AGGAGTTTGGTTCAGATCAAAAACCAACAAACTTCACATCTGTTCAACCA
TCAATTCAAATAAAAACCATTGTTACGACAGCGGTAATTTGCCAAGACAC
AAATACTCCAGAATTATCATCCGACAGGTACAATTGAAAAGACCAAACAa
cttcttgaaatatttctatcaaattttcatcaatggtaaaaaagtgaaag
aagTTTTGAACAAGAAGCCGAAGATTTTCAAACAGGTCAAATATTATGGC
AGTAATCCTTTCGGACAAGCTGCAAAGGGAATACTAAGAAATGTCAAATT
AGTCCAACACAAACACCAAGAATCGTACGCGGTTAGAAAGAAGCGCGTTA
TCATGCgaagaaagaaattattgaGAGGGTGGACTTTGTCAATGAGCATT
AAACCAACTGGTACAGTTAGTGGGTGG
Run BLAST on NCBI

transcript from alignment at sc0000504:45884..59030+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024578 ID=TCONS_00024578|Name=TCONS_00024578|organism=Clytia hemisphaerica|type=transcript|length=13147bp|location=Sequence derived from alignment at sc0000504:45884..59030+ (Clytia hemisphaerica)
TTTGACTATGAAATCACAACAGCCTCTGAAGAGAGGGAAGGAAACACAAG
AAGAGGGAAAACAAGCAGAGTGGAACCATGGAGTTCACGAAAATGTAAGT
CACTCAAAATCAAGAATTTCTgggataaaatttattttctttcattttac
ttTTGTCTATCTTCAAATNtattttctttcattttactttttgtCATTAT
CATCTTCCTTTTGTCTatcttcaaatcttcaaaaaCTCAATTAAAATTGT
TTTAAGACTTCACAGTAACATGGGCcctcttttaaaaaaaactggcTTAA
AGTTCCCTAAATTTGACTGGAGATTTGCAAAACCGGTATAGAACATGTTT
TAGTGGGTGCAATTTTATAAGTCCGTTTCTACTACGATTGACGTCCCTTT
AAAGGGTGGTCGGGGTCAAGTTTTTACCATGCTTACTCCATTTAATTTGG
ACACTTTCACTAACAAAGTTATAGTATTTACAGGTTCCGAAATCAACTAA
AGTAGAGATAAAGTTGACGCGCTCTAATTTGACGTTCTGCTATTTGATAA
TCTTCATTTTTCGATATCATTGAAACTTAACGTCAACAAAAAAATCTCAT
TAACGATGCTCTACTTCGATACGCTctattaggcgagaccaatttgatta
gttgttttacgggcttGACCGGCCTTGAaatgccaaaaatcaaaatcaaa
ataaaattgattttgctgGTACATTTACATTTTCATTGCTATACAGACTg
ccagattttcaaaattttggtattttttccaaggttttgagagtGTTATG
TtcagttttttcattttatccgtGAAATCGTAATTTCGGTGtcttttcat
tttctatttcgcatttttgtaaagatgtagtagtttttgctgccttttta
ggataaattctacttttatttttatttttttaccggCCGACCGACCGCGA
CCGACAGACAGACCCTCTTTTTGGGTAGCTCGGCCCGTAAAACagcaaat
taaattggcctcgccttattcgataatatcaagtccccgtcaacaagaaa
ctcctatacaacgctctactattcgatgaaaatccaattcttcttgaaaa
tcgaattagagagcgtcaactgtagctTGCTAACATTATATCCAAAATCA
CAGGTCggccaaaatagaaaaaacataCAAACTGCATGTACTACCACTTT
CCTAAATTGTGGCAATCTTAATCTAAAATTAGGAAGAAATTATATACAAA
TATTTTGTTTCTATTTCAGGGTCGGGCTCGTTGCTTTGGTGTTTCTTATT
ggagtgacgtcatcaagtgAAATTGTGGAAGAATTCGTTCCAAGTGACGA
ACATGTTGAACAGGTTCAAGATGTGTTGGCAAAAACTGGTAAGGCAAAAG
TGTGAAATGCGGATTAAAATCTTATACAAGCGTTTTGGGGAGATTCCACT
TGTTGGACAGTACATTTGTTCaacaaatctttaaaattgTCGAACTGATG
CACCAGTTGTTCAACAGTTATTAGTTTGACATCTATTTGTTCGACTGCTT
GATTGTACGACAACCCACTTGTTTTTTTTAcgaatttgtcgaacaagtgA
TTTGTCGAACAAATGGGTTGTCGAACATGTGACATATCACCAGCGTTTTT
CGAAACGACTTAATAGCTCAACACAGCTTTTATGTTTTAACAATAATTAG
AATCTTTATGTAAaattgatatataaaaattgtcatggaaaaaagtttgc
agcgaaaaaaaaattatattcaattCGGAAGAAATTTTTCCCTTGATTGg
acaaaaagataaaagagagttgcctctctctaattcgatctttctgggac
tatattttttattcgaaaTATAGAGAGCGTTTATCATTTCTTCCCATCTG
AGAAGACAAAGATTTTAACTCGAATTACACAGACCTACAGgaaggttcga
attatagagacttGGCTGTAACTACAATATTTTCTTTCCCCTTCAGATTA
TAGAGATTTTCACTGTAGTTCAAAATCTTACAATATTTTCTTTCCCCTTT
AGGCTGTCCTGGAGTTCGTCTTGAGAGAGTGGGATGCTTTAATGAACTAA
CATCGGATGATGGCATACATAGAACAATGAAAGAACAAGTAAGCATTGTT
TGAAACCTTAAAACCTTGAAGCTACTTTACTCAGCCGTTACTTAACAGTC
TAGTCAAATtccgaaaagaaaacttttttcatccTTTTTGATCAAGGAAA
AACGGGTCAAAGCTATAAAAAAGTTCCCTTTTCGGAACTAAAAAACAGTT
CCGTTTTTGGAATTCGACTAAACTGctcgacgttgtttcaacgttcatgt
aACATCCCTAACGTCTCGTTAAAGTTTGATGAGCTTTGAAACAATGCTGT
GTGCTAAGTGGGTAAAATTCTAAATTTCACCAAATTCCCATTGACCTCTC
TTATTTAAATCTTTttagtcttcaaaaaaaaaattagagtacCAAAAGTG
ACTATGACTGGCACTTTTCTACCGCAACTATTCTAAAAACGACACCCCTA
CTTAGGGTAATCGAAAAGCGAAAGGAAAAATATACCttaacaattttaaa
atttatacaTTTTCTAAGGCAGGAGGCATGTTTGGACGATAAGCGTCGTT
TTCTTACCTTCCCAAGTCTATTCAAGGGTtacaaaatcagaaaattttaa
agtagtctatatttttttgtttccagAAAAAAAGGGTCAGGAATCTTTCG
GAAATCGAAggaaattgttcaaaaatgtcttattttttcatgaaaatctc
tctaagggttggttttGAGAGACCTTGTCAACGCATAACTCTCTCCCGGG
TTTAAGAGTTGTAATCTTGACTCTCTAACTTAAACTCCTTAGATTTTGAA
TGGTCGTGACAAAGGATCAGCCGTATATGAAGGACCATTCTTGTCATGGC
AAAACTACCACGATTGGCTTATCAACTTTGCATGCAGATGTGGTCAAAAG
GTTGCTGCCCGTGGAGGATCCATCTTTTCACTACAATTTTTCGGTTAGTA
TtacaaaaatatgtacttaAAATCGTACCAATCGTACCAATTTGACACAA
AAATGTCATATTCcctaataccttatcggccaaaacttagtcggccctaa
gtgactaaattttggcttggtgactgaaatttgggcCGACCAAAAATTTG
GgacaaattaaaagtttataattaagctttccttaaccAACTTTTTTGAA
TACCACATCATTACGTCCGCTACAATTCATTATTTCGTCCGCTATTATTC
ATTATATATTAGTCGTCCCTTAGTGACTAAATTTTGACGAGGTGACTAAA
ATTAGGGCCGactaataattaaggccgactaaaattaagaccgactaagt
tttggccgataaggtatttagaGTTCAGTGCAGAACTTATGGTTTTCCTT
GGTATTTTCAACTTGCTGTCTTAGATGGAATTTTGAGTCTGTTTAAAAGA
ACTATGACGTTCTCAAACAAACTAGGCTAAATATTTTCCTTAGTTGACCT
GTATTATCAGCTTCATAGTTCGAATCACAATCTACTCGTCTAAATAAATG
TTTATACAACTATTGGTTTGAGCCATAAatctgaaatgaaatttttacac
cgctattgacaACAAATTTCCACAAATTTTCAGGTGAATGTTGGACAGAC
TTCCCAAAGGGAAAAGGCAAAGTTGAATACGCCAAACATGGATTATCTAA
CGGATGTTATGCCAGTAACTTCGATAAATACACTGGATCTCCAGTACAAA
CCAAATGGTATACCGGTGATCAGAAAACAAACTTCGTCTACAGAGCTATC
CCTATCGTCAAATGTAAGTTCTTGACAATATGTTATTTCCAGTTagaaca
caacgttgttttaacgttatttgaacgttaaggATGTCATGACGTTtctg
acacccctgtgtcacagacccactgggaccccagccacactggaaaattt
ggcaataaTTTCGTCCACgctgggaaaataccctggaatttcagccccac
ttggaaaatgattttgatttcatccccatttgaaattcactgtttaaaaa
ttgcactccaataCCATCCCCAttgggttttttaaccttggaacaataga
atttctatccctatCGGCATTTTAATAGGAACTTTTATCCCCAccgagga
aaaaagttccagtggggctgtgagaTAGGGGTACTTTCTGTGGTAGCTGG
GTTGGAATAAAAGTTACAGCCTACACGATTTCCAACAGTAACACAACTCA
ATTACACAAACCAACATCAACTAAGAGACAGCTGAATTCCTGGAGTCCTG
CCAATTTTGATAGTGAATTAAAGTCGGCAGCAAGCTAGCTGTCTAAAGTA
AAGTAAAGAATCGTAGGGGGCAAGCCTGGGGTTCcatgacatctttttta
cgacctaaccatttttagtctgtttcaaagaacagtatattacaagatat
ttttgagagggaggacgcagATTAGGCCCggtaaaactttttatgaccaa
aatagtaaAGCCATAGGCAAAAccgcaagggaaaataaggggtaggaata
aatagctgattttcaaaattcaaaataaacgaaaatgtttggtaccatct
gaaagagcatgaaattctgagcaaaaaaatgtattacaacaactctgact
aaaacacacaaagaaatacagccgcttgaagttcaaaaacataccgacgt
cagtaagatcaagacaagatttgacgtcaaatcagtagagctgacagtta
ggtggtcttaaagcggctgtatttctttgtgtgttttagtcagagagttg
ttgtaatacattttttgctcagaattccatgctctttcagatggtaccaa
tcattttctaGAATAGAACTAATAAATTTCTGACTCTAACTATTAGAATA
GGTCTTCTGAAGTgaccatgaaaatattttttgcttgtcATGCGTGCATT
CGTGTTTtgcgtgcctttgaaaaaaaattcgtgtctttcgaaaaaaaatc
acactcgTCTAAACTAGAACTAAAATCAAACTCTCAGTACTTTTCGAGAG
AATTATGGAGACTTTAGCCATCTCTATAAAGATGTTGAGTTCAATCTAAA
ATATCATCTTTTTCCATAATCGTAGCAACTACCCCACCACCAACAGAAGC
GGTTCCAACACCCGCTAACGCACAAACAAAGCCAGCACCAACCGCTAAAA
CTCTACCACCACCTCCACCAACCGCTGAAACTCCACCACCTACACCACCA
ACAGCTAAAACTCCACCACCACCTACACCACCAACCGCTAAAACTCTACC
ACCACCCACACTACCAACTGAACCAAAAACAGTAAAACCACCCACCAAAC
CAGCTACTTGCAAGCCAGCTCATGTTCTCAAAATGTTTCATGCTTACACA
AAGAAAACTCTACAAAAGACATGGTTTATGCGATTCCAAATCATGCCTAC
AGGAATCGTTAGCAGAAAATACGCCAGTATTGTCCACGTGACAACTAATC
ACAACATCAAACACTACGGTAGCCGAGTTCCAGGAATCTGGTTCCGACCA
AACAGCAACAGCCTTCATATCTGTTCTGCAGTCAACGGCAACAAAAACTT
TTGCTATAACAGTAAACCCCTTGCACAAGGAAAATACACCACCGTTTTGG
TTCGACAGGTAAAGCTAGTTTTATattattacacgcttttttataagagt
acaCGTGGCTCAATTTCGGccgaaaacgttaaaacaaaTAAAGCAAGATT
TCCACTTCTGATATCTGAGATGGCTTACGTTTAGGCCCTTTTAAATCAAT
GAGTGAACAAATTaagcatattaagaacattttcagaacattttagcttg
aaatCACGAAAATTAAGATGAGTCGACTAAACTAAAACTTACTAACGTTC
TAATATTATAAAAATCATGTAAAATAACTTTCAACTTCAATCACTAGTAG
ATTTTTCGAATTTGGTCGTGATGGTAATTctcttcaaaaaaacttttctc
aaaGGCTTTTTTACGGTTTGacattcaaatttaaagttttgataTCGGTA
TCTTTTATAATCAGGTGAAACAAGTAAAAGGAAACAAATATCTTTATCAA
ATCTACATCAACGGACGCAGAGTTATgaataaaatcaacaaagacCCAAG
AGTCTTTAAAAACGTTAAACTTTACCGAAGTGACCCGTGGTACCCAGCCA
CTAAAGCTTGCgtcaaaagtttcatttttggTAACATCCGCAATAGAAAC
CcacaaggtaaatacaaattctGAATTGGCCTTTGGTAAAATTAGGGtcg
tttaaagggacataaaagtagtaaaatgtaaacatttcgggaaccacgtg
tcattaaagagaacaattaaaatcacgtgtccaaacaaacttgtaaaaca
attgaaacaaacaaaattagccatgtttgtgtttgtttttttcaattttg
acatgtgacatttgttttgattttgtatcccgctgcatacggtttgttta
caaattacatcagtacttttatgtccctcaTCTAAATAGTACATTCCATA
GACCAAATGTTTGGTAACTTCCTATAGATGTTACCGAGAATGACAATACC
TTTTGAACACATGAGATAACAATGAAAGTATTTTTAATGAGTAGTATTTT
TAATGAGTATTcatttccaaggaaaatcaaataGCTAGAAAAAAATGGTT
TGGCATATAACGGGGGAGGTAATTTATCATTTAGTGTATCTCCTGCCATt
cctttttaaacaaaagaaagaacgaTATTTTTCCCTTTGGGGATTCTTTT
GTTTATCCTTTTTTGTCAGCATAGAGACTTTCTCTATCTTCAATCTTTCT
TTCTATCAGCATGCCAAAACgttaaaaaccaaattttgaaaggaCGAAAA
CTTCGTGTGTTACCAAAACTTCTCAGAGGATACACCCTCAAATTCAATAT
CAAACCATATGGATTCATCACCAAGAAATATGCAAGCATCTTCCATGCAA
CAACCGGTGGTAACGTCAGAGTTTACGGTGACCGTACGCCTGGAATCTGG
TTCCTACCAAACACAACTCGTTTACACATCTGTTCAGCTATTGgtggaaa
caaaaataaatgtttcaACACAGCTCAACTGGACGAAGATAAATCTTACA
ATATTGTCGTTCGACAAGTCCAAAAgtggaatttgaaatattatttccAA
GTGTTCTTGAATGGAAGGAAGATTGTAGATAAATTGAACACCAaaccaaa
agttttcaagaATGTACAACTATGGAATGGCGACAAATGGTACAGACCAG
CCCAAGCTTGTATCTCAAAAATCTCGTTCAGAAATATCAAGCACAGAGGT
ATATAATGATTCTGctcatatttttttccaaagacAAAAAGAGGTATCAC
TGTatctcactaacattctgccgattggtagtgtgaaggtttcgatcaca
gacttgcaccgcaatggactgtgttcgaatcccaagctcttccaggcagg
gtgttaggtAAATATGgtgactctctaccttcactcacaAAGACAGGTTT
TAGATTAAAATTAGACACCGAGTACATACGTACACGTTCATGTAAAAGTT
CCCTTTTTGTACTTTGAGAATAATGTTTATATAAACACTTTTCAAGCCAA
AACTCATATAACATCAGGATAACCAAAAAtctacttgttttttttttcaa
acaaatacattataaaaatcttaaaattaaaattgcAATGGAAATTAACT
ATACAGTTGACGAAGCAATATTGATAAAGACTAACTCTCTATGAAaattg
aatacaccttttcaaccgtagccgccaattgccgcacgGACatgttttac
caccctaaaactgtccctgtctttttttcgcacctaaagacaatataaaa
aagtttaaaaaaagaattggatcgagtttagggtggtaaattaaataata
aggTGGCACGCGCCTGGTCGCACGGCTACGGTCAAAATAGGTGTATAAAA
TTAATATAAAAGTCAGTCTTATCAATGATTTATAATTTCAGCTTTCAGGA
GACCAATCAAAAACAAAGCAGTGTTGAGAAAGAAGACTTTACTACGCGGA
TGGACATTAACAATGCATATCAAACCAAACGGTACAATCCCTGGATGGTC
TAACATCTTACATGCTACTATTGGCCAGAACGGCAAAAGATATGGCGATC
GTACCCCAGGTGTCTGGTTCATCTCAAAAACCAATAAACTTCACATCTGT
TCTGCAGTCAATGGACAAAGCAACCATTGCTTCAACAGCAAACCTTTACC
AaaaaacaaatacaacaaaGTGATCATTCGGCAAGTACAAAAGAAAGTAC
CAAACAATTTCCTTAAATATTTCTACGAAATATTCATTAATGGCAAGAGA
GTTAAAAGTATTATCAACAATAAGCCAAAAGTCTTCAAGAATGTCACCTA
CTACATCAGTGATCCATGGTATAACCCAGCCAAAGCCATCCTGAGAAGCT
TGGATCTGAAAATGCACAAACACAAAGGTTTGGTATATTCTTTTGTTCAA
AATTTAACCAGCTTTCAAACTCACAAAACTTTACAATAACCCTAAGTCTC
CATAGACAGATAGATAGAGTCTAGATATTCTAAAaatggatagcccagta
atctaggactgtTNAAATCACTTTCTAGAATTCGATGGTTTGAGACCGCT
TACGCCTTtaaccacttggccatcgctacatcacttcttgttttattttt
aaaactttgaaggTACGTACGATTTCGAGGTACACACAAAATAATATTTC
TGATCTGTATACATTCCTAACGGCAAGTAGACTCTTCATTGTTGTTTTGG
GTGAAAACGAATTTAGGTGGAAGTGTTATAAAACATAAGACAAGTAAGAT
TATACTACAATGATAATAAATTAAGAAATTACAGTTTATTTTGACCTTAT
TTCTTAATCCTTTAGAATCGTACGCGGTTAGAAAGAAGCGCGTTATCATG
CgaagaaagaaattattgaGAGGGTGGACTTTGTCAATGAGCATTAAACC
AACTGGTACAGTCAGTGGAtggtcaaacattttccacgCCACAATCGGGC
AGAATGTCAAGCGTTATGGCGACAGAGTCCCTGGCATCTGGTTCAAATCA
AAGACAAACCAGCTCCATATCTGTTNACCAACTGGTACAGTTAGTGGGtg
gtcaaacattttccacgCCACAATCGGGCAGAATGTCAAGCGTTATGGCG
ACAGAGTCCCTGGCATCTGGTTCAAATCAAAGACAAACCAGCTCCATATC
TGTTCAGCAGTCAGCGGAAAAGTTAACCACTGTTTTGACAGCAAAGCTTT
ACCAAAGAACAAATTCACACAATTGATGGTTCGGCAAATACAAAAGGATA
ACAATAAATATTATTACCAAATTTTCATCAACAACAAAAGAGTTCATAGT
GTTGTGAACACAAAACCACAAGTTTTCAAGAATGTCATATTTTACGCAGC
TGATCCTTGGTACAACCCCGCAAAAGCTCAACTCCGAAAAGTTAATTTCG
TCATGCACAAACATCACAGTAAGTTTTGTAATatttcttttgaagaaaaa
aaaaacaaatacctCTAATCTTAACTTTTATTCTCAGTTATTTTTcgaat
acacgtcttttttatataagaacaaactatataagaacataaggcttcga
tgaccaaaatatccATAACAGGTTAAGAATATTGGAAGGTTTTTCAAGGT
CTAAAAcaatcaatttcattttaggaaaatggataaCAATCCTcccaaaa
tagtgaaaataagggtcttttaggcttaaaaatcaaagGATTAGatcatc
cgaaggcttcaaaattaaaaaaaattcttataaaagcaaacgTGTATCAA
GAACTCTAAATCCGAAACGAGTTtctaaattgaattttttatttcctcAA
CTGCAGATCACCGAGGtatcaagaaaaacactttaTTGAGGACAGAGAAA
AATTTAAAGAGAGGATGGACACTGAGCTTCGGACTCAAACCAACCGGAGT
TAGCAATGGATGGGCTAATATCTTGCATGCAACAATTGGTAAAAACCTTG
GACGCCACGGAGACCGAGTTCCAGGAGTTTGGTTCAGATCAAAAACCAAC
AAACTTCACATCTGTTCAACCATCAATTCAAATAAAAACCATTGTTACGA
TAGCGTTAATTTGCCAAGACACAAATACTCCAGAATTATCATCCGACAGG
TACAATTGAAAAGACCAAACAacttcttgaaatatttctatcaaattttc
atcaatggtaaaaaagtgaaagaagTTTTGAACAAGAAGCCGAAGATTTT
CAAACAGGTCAAATATTATGGCAGTAATCCTTTCGGACAAGCTGCAAAGG
GAATACTAAGAAATGTCAAATTAGTCCAACACAAACACCAAGGTGAGAAT
CTTCTTTATGTAGCTAATTTGATTTTGTGCGAATACAGTTGactttcgct
aattcgaacttctattataggaatctttctataattcaaactcgttctca
gtccccgtcaagggaAAACCCTTGTAAATCACTTTCTAGAATTCGATGGT
TTGAGACCGCTTACGCCTTtaaccacttggccatcgctacatcacttctt
gttttatttttaaaactttgaaggTACGTACGATTTCGAGGTACACACAA
AATAATATTTCTGATCTGTATACATTCCTAACGGCAAGTAGACTCTTCAT
TGTTGTTTTGGGTGAAAACGAATTTAGGTGGAAGTGTTATAAAACATAAG
ACAAGTAAGATTATACTACAATGATAATAAATTAAGAAATTACAGTTTAT
TTTGACCTTATTTCTTAATCCTTTAGAATCGTACNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGGTTCTTATCA
AAGCAAACGTGTATCAACTCTAAATCCGATTCGAGTTTCTagaatgaatt
ttttatttacttaactGCAGGTCACCGAGCtatcaagaaaaacactttaT
TGAGGACAGAGAAAACTTTAAAGAGAGGATGGACACTGAGCTTCGGACTC
AAACCAACCGGAGTTAGCAATGGATGGGCTAACATCTTGCATGCAACAAT
TGGTAAAAACCTTGGACGCCACGGAGACCGAGTTCCAGGAGTTTGGTTCA
GATCAAAAACCAACAAACTTCACATCTGTTCAACCATCAATTCAAATAAA
AACCATTGTTACGACAGCGGTAATTTGCCAAGACACAAATACTCCAGAAT
TATCATCCGACAGGTACAATTGAAAAGACCAAACAacttcttgaaatatt
tctatcaaattttcatcaatggtaaaaaagtgaaagaagTTTTGAACAAG
AAGCCGAAGATTTTCAAACAGGTCAAATATTATGGCAGTAATCCTTTCGG
ACAAGCTGCAAAGGGAATACTAAGAAATGTCAAATTAGTCCAACACAAAC
ACCAAGGTGAGAATCTTCTTTATGTAGCTAATTTGATTTTGTGCGAATAC
AGTTGactttcgctaattcgaacttctattataggaatctttctataatt
caaactcgttctcagtccccgtcaagggaAAACCCTTGTAAATCACTTTC
TAGAATTCGATGGTTTGAGACCGCTTACGCCTTtaaccacttggccatcg
ctacatcacttcttgttttatttttaaaactttgaaggTACGTACGATTT
CGAGGTACACACAAAATAATATTTCTGATCTGTATACATTCCTAACGGCA
AGTAGACTCTTCATTGTTGTTTTGGGTGAAAACGAATTTAGGTGGAAGTG
TTATAAAACATAAGACAAGTAAGATTATACTACAATGATAATAAATTAAG
AAATTACAGTTTATTTTGACCTTATTTCTTAATCCTTTAGAATCGTACGC
GGTTAGAAAGAAGCGCGTTATCATGCgaagaaagaaattattgaGAGGGT
GGACTTTGTCAATGAGCATTAAACCAACTGGTACAGTTAGTGGGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013806XLOC_013806Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024578-exon-sc0000504-1491911889:45884..45977TCONS_00024578-exon-sc0000504-1491911889:45884..45977Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1510915933:45884..45977TCONS_00024578-exon-sc0000504-1510915933:45884..45977Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1575043694:45884..45977TCONS_00024578-exon-sc0000504-1575043694:45884..45977Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1491911889:47153..47271TCONS_00024578-exon-sc0000504-1491911889:47153..47271Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1510915933:47153..47271TCONS_00024578-exon-sc0000504-1510915933:47153..47271Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1575043694:47153..47271TCONS_00024578-exon-sc0000504-1575043694:47153..47271Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1491911889:47936..48021TCONS_00024578-exon-sc0000504-1491911889:47936..48021Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1510915933:47936..48021TCONS_00024578-exon-sc0000504-1510915933:47936..48021Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1575043694:47936..48021TCONS_00024578-exon-sc0000504-1575043694:47936..48021Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1491911889:48776..48926TCONS_00024578-exon-sc0000504-1491911889:48776..48926Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1510915933:48776..48926TCONS_00024578-exon-sc0000504-1510915933:48776..48926Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1575043694:48776..48926TCONS_00024578-exon-sc0000504-1575043694:48776..48926Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1491911889:49567..49746TCONS_00024578-exon-sc0000504-1491911889:49567..49746Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1510915933:49567..49746TCONS_00024578-exon-sc0000504-1510915933:49567..49746Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1575043694:49567..49746TCONS_00024578-exon-sc0000504-1575043694:49567..49746Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1491911889:51059..51591TCONS_00024578-exon-sc0000504-1491911889:51059..51591Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1510915933:51059..51591TCONS_00024578-exon-sc0000504-1510915933:51059..51591Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1575043694:51059..51591TCONS_00024578-exon-sc0000504-1575043694:51059..51591Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1491911889:51998..52190TCONS_00024578-exon-sc0000504-1491911889:51998..52190Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1510915933:51998..52190TCONS_00024578-exon-sc0000504-1510915933:51998..52190Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1575043694:51998..52190TCONS_00024578-exon-sc0000504-1575043694:51998..52190Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1491911889:52793..53281TCONS_00024578-exon-sc0000504-1491911889:52793..53281Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1510915933:52793..53281TCONS_00024578-exon-sc0000504-1510915933:52793..53281Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1575043694:52793..53281TCONS_00024578-exon-sc0000504-1575043694:52793..53281Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1491911889:53975..54460TCONS_00024578-exon-sc0000504-1491911889:53975..54460Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1510915933:53975..54460TCONS_00024578-exon-sc0000504-1510915933:53975..54460Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1575043694:53975..54460TCONS_00024578-exon-sc0000504-1575043694:53975..54460Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1491911889:54899..55501TCONS_00024578-exon-sc0000504-1491911889:54899..55501Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1510915933:54899..55501TCONS_00024578-exon-sc0000504-1510915933:54899..55501Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1575043694:54899..55501TCONS_00024578-exon-sc0000504-1575043694:54899..55501Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1491911889:58004..58489TCONS_00024578-exon-sc0000504-1491911889:58004..58489Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1510915933:58004..58489TCONS_00024578-exon-sc0000504-1510915933:58004..58489Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1575043694:58004..58489TCONS_00024578-exon-sc0000504-1575043694:58004..58489Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1491911889:58924..59030TCONS_00024578-exon-sc0000504-1491911889:58924..59030Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1510915933:58924..59030TCONS_00024578-exon-sc0000504-1510915933:58924..59030Clytia hemisphaericaexon
TCONS_00024578-exon-sc0000504-1575043694:58924..59030TCONS_00024578-exon-sc0000504-1575043694:58924..59030Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000504supercontigsc0000504:45884..59030 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0311399	0	5.22485e-06	0	0.0590933	553.873	624.953	555.282	665.111	455.535	691.504	0.048908	0	0	1.73264e-07	0	8.07683e-05	1.22126	0	0	0	0	2.40353e-06	0.0685536	0	4.84246e-06	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024578 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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