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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024497 ID=TCONS_00024497|Name=TCONS_00024497|organism=Clytia hemisphaerica|type=transcript|length=379bp
ATCCTCAATTGAGATCCTTGATTTAGGCATTTTGAAATACATCTTTTCTG
ATTGGATTTCCAAAGCTACACATTCCagctatttacaaaaaaataatata
cacGGGGTCAATTTTATTATTAActtgattttgttaaaaatataaattat
aaAGAATTAATCAAAACATATAGATATCTATAATACAGACTTAGTATAAA
CATAATAATCTCTATAACACACACCAGCCAAACTTAATGTTGTTTGCTGT
CGCCATATCCCTCAAATCGCCACTTCTCCATCTCGCTTTTTTTATTGATG
AGCTTTTTACATTGCAACCGTTTCTGATCGTTTGATTTCGTTGGTGATTT
GGGTCAAATCTTGAATAAATGTTtgaatc Run BLAST on NCBI transcript from alignment at sc0000501:11880..13305+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024497 ID=TCONS_00024497|Name=TCONS_00024497|organism=Clytia hemisphaerica|type=transcript|length=1426bp|location=Sequence derived from alignment at sc0000501:11880..13305+ (Clytia hemisphaerica)
ATCCTCAATTGAGATCCTTGATTTAGGCATTTTGAAATACATCTTTTCTG
ATTGGATTTCCAAAGCTACACATTCCagctatttacaaaaaaataatata
cacGGGGTCAATTTTATTATTAActtgattttgttaaaaatataaattat
aaAGAATTAATCAAAACATATAGATATCTATAATACAGACTTAGTATAAA
CATAATAATCTCTATAACACACACCAGCCAAACTTAATGTTGTTTGCTGT
CGCCATATCCCTCAAATCGCCACTTCTCCATCTCGATCTAAAAAGTGTAA
TTTCGGGGTCAAATATGTGTACTGCAGGGAACCCTTCcaactgaaaaaaa
ttgtctaaaatatCGTCCCGGTGGAAATTTATCCTTAAATTTGTACCCCG
GTTGAAAGTGATCAAATAAACCACTGCAAAATATGATGCTTTTTTCCCAT
CACCACTGaattttctaatttgaaaaacaaaagaattgaaatacccagcc
ataaaaaatatgggaacatcaatccccagccataaaaaatatggttatat
caatccccatcgagtttcagtccattatttttatccccactggctagaaa
aaaaattctatcggGCCTGTGAGAAGGGGGCATATAAATAGAAGCTTTCT
ATATCAGACAAAATTGTTAGTCGGTTGGTTGGACAGTCGTAAGACATGCA
AGAGGTTTACGGGCAAAAAAACTATAATAGTTGAAATCAGAAGGCGTAAA
AGTCCCGCTGAACCAGAAATGTAGTTCATAGCACAAAAGGATGAAGTTTA
TTTTCTCCCTAGACTacatgaaattataaaaaattaacaactttttttat
tctgagaatcttcattttcattttcatcttcatgttctaattttttttaa
ttattattctCAGAAATTATAGTGTTCTGAATTGTCCAACGGCATATAGA
ATGTTCGATTGAAGCATTCGTTGAAAAATGGCAAGCAAGACAAAGATTAA
ATGTGAATGTACTTAACagtacttttttataagaatatttaagatgaaat
tggccaaaaatagAGAATATGGGAAGCATACGACTATCAcggaatttggc
aactgaaccttagaatgccatttttaaagcatttttccattaaattgcca
attatcccCAGCAATACTAAAAAGAGCCAAATTTTTGCTTGAGGTATGCA
ATACATGCTAGATTTTGGCTGGGTTTAGAACCAAAtcaagaataccgtaa
gaatgtTTCAGGacgtttttctcaaaaagttatGAATTATTaccattctt
acaaaaaagcgtgtacaaatTATAAAATGTACCTTTTTTTATTGATGAGC
TTTTTACATTGCAACCGTTTCTGATCGTTTGATTTCGTTGGTGATTTGGG
TCAAATCTTGAATAAATGTTtgaatc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024497-exon-sc0000501-1491911889:11880..12164 | TCONS_00024497-exon-sc0000501-1491911889:11880..12164 | Clytia hemisphaerica | exon |
| TCONS_00024497-exon-sc0000501-1510915933:11880..12164 | TCONS_00024497-exon-sc0000501-1510915933:11880..12164 | Clytia hemisphaerica | exon |
| TCONS_00024497-exon-sc0000501-1575043694:11880..12164 | TCONS_00024497-exon-sc0000501-1575043694:11880..12164 | Clytia hemisphaerica | exon |
| TCONS_00024497-exon-sc0000501-1491911889:13212..13305 | TCONS_00024497-exon-sc0000501-1491911889:13212..13305 | Clytia hemisphaerica | exon |
| TCONS_00024497-exon-sc0000501-1510915933:13212..13305 | TCONS_00024497-exon-sc0000501-1510915933:13212..13305 | Clytia hemisphaerica | exon |
| TCONS_00024497-exon-sc0000501-1575043694:13212..13305 | TCONS_00024497-exon-sc0000501-1575043694:13212..13305 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000501 | supercontig | sc0000501:11880..13305 + |
Blast
The following BLAST results are available for this feature:
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