TCONS_00024495 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024495
Unique NameTCONS_00024495
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length169

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024495 ID=TCONS_00024495|Name=TCONS_00024495|organism=Clytia hemisphaerica|type=transcript|length=169bp
CGAACACGAGCGGCACGAGCGGGATGGACATTTTCCAAACAAATCGACAA
AAGTAACGAAAGAGACTAGAAGGCTGCTACAAAGATTATTTAAAAACCCC
AGTAAACCTAGTACTATCCAATACAAGACGATGGAGTTAGGGACAGAAAT
CGGACAAAAGTTGAAGGTA
Run BLAST on NCBI

transcript from alignment at sc0000499:291774..291942

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024495 ID=TCONS_00024495|Name=TCONS_00024495|organism=Clytia hemisphaerica|type=transcript|length=169bp|location=Sequence derived from alignment at sc0000499:291774..291942 (Clytia hemisphaerica)
TACCTTCAACTTTTGTCCGATTTCTGTCCCTAACTCCATCGTCTTGTATT
GGATAGTACTAGGTTTACTGGGGTTTTTAAATAATCTTTGTAGCAGCCTT
CTAGTCTCTTTCGTTACTTTTGTCGATTTGTTTGGAAAATGTCCATCCCG
CTCGTGCCGCTCGTGTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013760XLOC_013760Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024495-exon-sc0000499-1491911889:291774..291942TCONS_00024495-exon-sc0000499-1491911889:291774..291942Clytia hemisphaericaexon
TCONS_00024495-exon-sc0000499-1510915933:291774..291942TCONS_00024495-exon-sc0000499-1510915933:291774..291942Clytia hemisphaericaexon
TCONS_00024495-exon-sc0000499-1575043694:291774..291942TCONS_00024495-exon-sc0000499-1575043694:291774..291942Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000499supercontigsc0000499:291774..291942 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024495 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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