TCONS_00024465 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024465
Unique NameTCONS_00024465
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2141

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024465 ID=TCONS_00024465|Name=TCONS_00024465|organism=Clytia hemisphaerica|type=transcript|length=2141bp
AAGAAAGGAGAGCAAAGTCACATGACAGTGTTTTGTTTGAAGAGTTGACC
TTAAGAAAACATTCGCTCTATTCAATTCTAAAGAACATACTTTACAAGAA
CCTTTCCTGCTTAGCATCCTGTCCTTGACTTTTTTTCCTTCCCAATTTCA
GAGGGACCATGATTAGTTTTTGAACCGTGTTGGTATGTTGATCTGAGGGA
TGCGTACACAGCCACAAAAACAAGAATAAAACACAATGGCGATTACAGAT
AGTATCAAACAAATTCTTTCGGTCAAAATCAAGCCTAGACATGATTCCTA
CTCTGATCAATTCTCTCGCATCTTCATGGTCAAAATCATGATGATAAGCG
CTTTGTTGGTCGGGTTGAGCTGGTACACCGATAAAATTAATTGTATCATT
CCTTCAGCTCTCGGTGTAGATGGGAACTTCGTAGCTCAAGCATGCTGGAT
CAACGGTTTGTACGTTTACAAGGATATTCGTTACCATGTCAACGATATTG
GTTACTATGGGTTGCCACGGGATATCAATAATGACGGAATGTTCGAAAAT
GGTGACATTTGCGCCACAACTGATTCCTCACATCGAGTGAACGAGAAATG
CCGCCCTATGGAAAAGACCTTCTATTTACAATACCAGTATATGACCTTCA
TCATGGCCGCCCTCGCTGTGTTGTATTACGCCCCATACGCCTTCTTCAGA
CTGATCAACCAAGATATTGTTTCCTTGAAAGGCTCCATAAATGataATGA
TGCAGAGGGTATCGTGAAGAATTATTTCAACTACAAGATCAACAGTGAGT
TTCGTATGCGAATGCGAATTATTGGGAATATTATGATCAAACTCCTTTAC
ATTGTTGGCAATGTTGCAGCTTTCTTGATTGTGGATGGGGTTTTGAACGG
TGACTATAAGACGTATGGTATCACTTGGACCACGTGGTCGAAATTACCCA
ACTCGATGGCTTACGATTATATGGGACAACGTTTGAGCGCCAAACCCGGC
AACATCTTGCTACCATCCTTCGCATTCTGTGAAGTACACGAAGCAGCGCA
AGATATCAAGAATGTCATCACTAACAAGCATAAGTTCGTCTGTGAGCTCT
CACAACATATCTTGTATCAATATGTCTTCATCATTTGTTGGTTCACTATG
GTCATCTCCATCGCTGTTGCAGTCCTTGGATTCATCATGCAAATTGCTGA
ACATATTATGACAATGGCTTGCTTTATGAAGGGAGGTGCACCAGCAAGGA
AAATGTACCAAGTGTTGACATTGAGAGAATGTGAATATCTGGAATACATT
CGACGCAAGAACATGCCTTTGTATGGAGCCGTCATTCAAAAGCTGAAAGA
AGAGAGATATGACGGTTTGGCCAACGACCAAAAACCGATGTATGACGGTG
GAAACTCTTATGAGATGAATTAAAGTGATTTAGTCAAGCGCACCATATTC
TTGTACAgataatattttttacaaaaacgaATATTGAATTGGAAAATTCG
TGAAAGAGGGCTTTAGAAACCCGAAAACTGggtccaaaattttaaaagaa
caataactttgtcacaattttttacactttttttaatagatttgtACAAC
TTTTTTTAACGCAACAGATATTTTTTGAtacaattttacattttatactt
TATCATGTTTTATAGTAGTATTTGTACTATTATTTTGGTTAATTTTCTAA
cttcaaaaaaacgaacaaagtCACCAAACTATTTGATGCCATTATAAGTC
ATTGTCGAGATCGAAAGCGACCCAAAGGCTCTcttgtctacccgaaggta
ggggagggtgccaaTCATTTTCTTGGTTTATCCATTTACCCTTGATCATT
CTAGTTAGTTGCTGAGTATCAAGCAGAGAGGTGTCTTCATCTCAACGTTT
TGTTTATCATCAGAAGAAAATACTTTCGTCTTGGATGAGGTATAGAGACC
GAAATAAGATGGTTTAACATAATATTCTGTATTTAAGTCAAAGATGACTG
AAAATCAGTTCCTATATAATTTGTTACAGTGCATGGTCGAGAAACAAAGG
ACGTTATAAAAGTTCAAATTTGAAGCATGATATAATTGTACTCCAAACTT
ATCAGTTTTTACTAACGGTCATATGAAGAGATAAAGGTCGA
Run BLAST on NCBI

protein sequence of Innexin

>TCONS_00024465-protein ID=TCONS_00024465-protein|Name=Innexin|organism=Clytia hemisphaerica|type=polypeptide|length=395bp
MAITDSIKQILSVKIKPRHDSYSDQFSRIFMVKIMMISALLVGLSWYTDK
INCIIPSALGVDGNFVAQACWINGLYVYKDIRYHVNDIGYYGLPRDINND
GMFENGDICATTDSSHRVNEKCRPMEKTFYLQYQYMTFIMAALAVLYYAP
YAFFRLINQDIVSLKGSINDNDAEGIVKNYFNYKINSEFRMRMRIIGNIM
IKLLYIVGNVAAFLIVDGVLNGDYKTYGITWTTWSKLPNSMAYDYMGQRL
SAKPGNILLPSFAFCEVHEAAQDIKNVITNKHKFVCELSQHILYQYVFII
CWFTMVISIAVAVLGFIMQIAEHIMTMACFMKGGAPARKMYQVLTLRECE
YLEYIRRKNMPLYGAVIQKLKEERYDGLANDQKPMYDGGNSYEMN
Run BLAST on NCBI

transcript from alignment at sc0000499:116618..121698-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024465 ID=TCONS_00024465|Name=TCONS_00024465|organism=Clytia hemisphaerica|type=transcript|length=5081bp|location=Sequence derived from alignment at sc0000499:116618..121698- (Clytia hemisphaerica)
AAGAAAGGAGAGCAAAGTCACATGACAGTGTTTTGTTTGAAGAGTTGACC
TTAAGAAAACATTCGCTCTATTCAATTCTAAAGAACATACTTTACAAGAA
CCTTTCCTGCTTAGCATCCTGTCCTTGACTTTTTTTCCTTCCCAATTTCA
GAGGGACCATGATTAGTTTTTGAACCGTGTTGGTATGTTGATCTGAGGGA
TGCGTACACAGGCGAGGCTTTGCTAAAATTTGCGTTACAAAATTCAGATG
AATGAAAATTATTTCGAATTTTTTTATTGGAATGAATGAGAAAACCATTC
GAGTTGTTTTCTTAGAAAATACTGTTAGATTATACTGTTTGAATTTTAAG
GATTGAAAGGAACTTTGGCATAACTTTTACTGTTTTGATAATGTTCTTTG
AGAGATTAGATTTTAATTTTAGAAGCATCTTTAGATTAGTAATAAAGTTA
ATGTTATTGTAAGCGGGGTTAATCTTGAATTATAAATCATTTCGATTGAG
ATTTGGCGGCGGATGATTAATGGCGTTTGATAATTGCAAGAGATTGATTA
CTAAAAATCTAAGTTTTAGAAACGGTTGCAAAGTATTCAAGGCACTCTCC
TCCAATTATTATTACGCGAAAAAGGATTTGGGAATGATTACCGAAAATTG
TCTCTAACGATAGATTAGTAACTGAATATAATACAAAAGAAATTGTTTTT
CATCGACATAATACTCATTCATTCATTTTTAGCCACAAAAACAAGAATAA
AACACAATGGCGATTACAGATAGTATCAAACAAATTCTTTCGGTCAAAAT
CAAGCCTAGACATGATTCCTACTCTGATCAATTCTCTCGCATCTTCATGG
TCAAAATCATGATGATAAGCGCTTTGTTGGTCGGGTTGAGCTGGTACACC
GATAAAATTAATTGTATCATTCCTTCAGCTCTCGGTGTAGATGGGAACTT
CGTAGCTCAAGCATGCTGGATCAACGGTTTGTACGTTTACAAGGATATTC
GTTACCATGTCAACGATATTGGTTACTATGGGTTGCCACGGGATATCAAT
AATGACGGAATGTTCGAAAATGGTGACATTTGCGCCACAACTGATTCCTC
ACATCGAGTGAACGAGAAATGCCGCCCTATGGAAAAGACCTTCTATTTAC
AATACCAGTATATGACCTTCATCATGGCCGCCCTCGCTGTGTTGTATTAC
GCCCCATACGCCTTCTTCAGACTGATCAACCAAGATATTGTTTCCTTGAA
AGGCTCCATAAATGGTGAGTATCAAATCCGTTTTAAATTTTGGAGCTTGT
AGAGAGCGACAAAGCAACGCCCATCGTTTTAATGTTTGGATATGTGCAAG
GTGGTACAGCTTTGCAATTATCCAGAATTTGTAGATTTCTACGAACATAA
TCAGTACTAAAAATCTGAACCTTTCGTCACTGTAAGTCCTGCAAAAAATT
CCCTTTGTGCACTAAAAGTCAAGCAGTGTAAGAAATAAACTTCCACGAAA
AAATGTGGNTTTACTGTTTTGATAATGTTCTTTGAGAGATTAGATTTTAA
TTTTAGAAGCATCTTTAGATTAGTAATAAAGTTAATGTTATTGTAAGCGG
GGTTAATCTTGAATTATAAATCATTTCGATTGAGATTTGGCGGCGGATGA
TTAATGGCGTTTGATAATTGCAAGAGATTGATTACTAAAAATCTAAGTTT
TAGAAACGGTTGCAAAGTATTCAAGGCACTCTCCTCCAATTATTATTACG
CGAAAAAGGATTTGGGAATGATTACCGAAAATTGTCTCTAACGATAGATT
AGTAACTGAATATAATACAAAAGAAATTGTTTTTCATCGACATAATACTC
ATTCATTCATTTTTAGCCACAAAAACAAGAATAAAACACAATGGCGATTA
CAGATAGTATCAAACAAATTCTTTCGGTCAAAATCAAGCCTAGACATGAT
TCCTACTCTGATCAATTCTCTCGCATCTTCATGGTCAAAATCATGATGAT
AAGCGCTTTGTTGGTCGGGTTGAGCTGGTACACCGATAAAATTAATTGTA
TCATTCCTTCAGCTCTCGGTGTAGATGGGAACTTCGTAGCTCAAGCATGC
TGGATCAACGGTTTGTACGTTTACAAGGATATTCGTTACCATGTCAACGA
TATTGGTTACTATGGGTTGCCACGGGATATCAATAATGACGGAATGTTCG
AAAATGGAGACATTTGCGCCACAACTGATTCCTCACATCGAGTGAACGAG
AAATGCCGCCCTATGGAAAAGACCTTCTATTTACAATACCAGTATATGAC
CTTCATCATGGCCGCCCTCGCTGTGTTGTATTACGCCCCATACGCCTTCT
TCAGACTGATCAACCAAGATATTGTTTCCTTGAAAGGCTCCATAAATGGT
GAGTATCAAATCCGTTTTAAATTTTGAAGCTTGTAGAGAGCGACAAAGCA
ACGCCCATCGTTTTAATGTTTGGATAAGTGCAAGGTGGTACAGCTTTGCA
ATTATCCAGAATTTGTAGATTTCTACGAACATAATCAGTACTAAAAATCT
GAACCTTTCATTACTGTAAGCCCTGCAAAAAATTCCCTTTGTGCACTAAA
AGTCAAGCAGTGTAAGAAATAAACTTCCACGAAAAAATGGAAGTGGGGTT
TTACCAATTCCAATTGATCGATCGTACTAACCAAACCACAATTTATATCA
AGAAGCAAAATGATACTTTCTTTCATTATGTTATTCTGTAACTTTATGAG
AAAGGTCTGGCCTGACAAGTGAGAAACCAGAACCTTTGAAAGCATGAGGC
GAGTGGATGAAAGATTACAATGAATGGATAAAAAATAGATGACGAATGAA
TTTAAAAAAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAA
TGAATGAATGAATGAATGAATGAATGAATGAATGAACGAATGAATGAATG
AATGAATGAATGAACAAAAATGTTCCCTTTTTTCTTTCAGATAATGATGC
AGAGGGTATCGTGAAGAATTATTTCAACTACAAGATCAACAGTGAGTTTC
GTATGCGAATGCGAATTATTGGGAATATTATGATCAAACTCCTTTACATT
GTTGGCAATGTTGCAGCTTTCTTGATTGTGGATGGGGTTTTGAACGGTGA
CTATAAGACGTATGGTATCACTTGGACCACGTGGTCGAAATTACCCAACT
CGATGGCTTACGATTATATGGGTAAGTCGACATTATTGTTTATTCATGGA
AGGAATTGGAGTTTTTTTGGAACAGTGAATTTTTGGATAAATTTCACGAT
GAAAATCTGCAATCTACTTAAGATTTTCAGCTTTTCACTGAGAATTCTCC
AAAAAAAGAACTATGAAAGGCTTTACATTTTCCCTGTGAAAGAGATTTGA
CACATCTGAATAAGTGTAGCTGAAACAGCTTATGATCAATGGTAGTTGAT
TGGTTAGTCACTCCAAAATAAAAAAATAATAACATTTTCGAATCTACCAT
TACAGGACAACGTTTGAGCGCCAAACCCGGCAACATCTTGCTACCATCCT
TCGCATTCTGTGAAGTACACGAAGCAGCGCAAGATATCAAGAATGTCATC
ACTAACAAGCATAAGTTCGTCTGTGAGCTCTCACAACATATCTTGTATCA
ATATGTCTTCATCATTTGTTGGTTCACTATGGTCATCTCCATCGCTGTTG
CAGTCCTTGGATTCATCATGCAAATTGCTGAACATATTATGACAATGGCT
TGCTTTATGAAGGGAGGTGCACCAGCAAGGTTAGTGAACTATTCTCTTGT
GTTCTCATTCGGCGTGTGAGCTTCCATAACCAAAACTCGAGTTATGATAT
ATGAAAAATATTGAGTTATGGGGACTGGCTTCTAAAGGGTTTGAGAAATG
AAGGAATCAGACAACTTGTTTAAGTTAAGTAGACCATTCGAGTTTGTTCA
CATTATGGATAATTCGTTGTATTGAGTTAAAGAGACCCTAATGTGAGCCT
CAAATATCTCGCTCGTGTTAATAAGAGACTTGATCTCTTTCACTTAAAGC
AGGTAGATTTATGAAATTTTTGAACGCATTCTAAACGATGAGTATCAGCA
ACCAGTCTCGTTTCTTAGTTCATTTTGGAGTCTATTTCACGACCATCTTG
TCAAAGATGTATTCAAATGATCTATTCTCCTCCCATAGGAAAATGTACCA
AGTGTTGACATTGAGAGAATGTGAATATCTGGAATACATTCGACGCAAGA
ACATGCCTTTGTATGGAGCCGTCATTCAAAAGCTGAAAGAAGAGAGATAT
GACGGTTTGGCCAACGACCAAAAACCGATGTATGACGGTGGAAACTCTTA
TGAGATGAATTAAAGTGATTTAGTCAAGCGCACCATATTCTTGTACAGAT
AATATTTTTTACAAAAACGAATATTGAATTGGAAAATTCGTGAAAGAGGG
CTTTAGAAACCCGAAAACTGGGTCCAAAATTTTAAAAGAACAATAACTTT
GTCACAATTTTTTACACTTTTTTTAATAGATTTGTACAACTTTTTTTAAC
GCAACAGATATTTTTTGATACAATTTTACATTTTATACTTTATCATGTTT
TATAGTAGTATTTGTACTATTATTTTGGTTAATTTTCTAACTTCAAAAAA
ACGAACAAAGTCACCAAACTATTTGATGCCATTATAAGTCATTGTCGAGA
TCGAAAGCGACCCAAAGGCTCTCTTGTCTACCCGAAGGTAGGGGAGGGTG
CCAATCATTTTCTTGGTTTATCCATTTACCCTTGATCATTCTAGTTAGTT
GCTGAGTATCAAGCAGAGAGGTGTCTTCATCTCAACGTTTTGTTTATCAT
CAGAAGAAAATACTTTCGTCTTGGATGAGGTATAGAGACCGAAATAAGAT
GGTTTAACATAATATTCTGTATTTAAGTCAAAGATGACTGAAAATCAGTT
CCTATATAATTTGTTACAGTGCATGGTCGAGAAACAAAGGACGTTATAAA
AGTTCAAATTTGAAGCATGATATAATTGTACTCCAAACTTATCAGTTTTT
ACTAACGGTCATATGAAGAGATAAAGGTCGA

Coding sequence (CDS) from alignment at sc0000499:116618..121698-

>TCONS_00024465 ID=TCONS_00024465|Name=TCONS_00024465|organism=Clytia hemisphaerica|type=CDS|length=4752bp|location=Sequence derived from alignment at sc0000499:116618..121698- (Clytia hemisphaerica)
GAAAATGTACCAAGTGTTGACATTGAGAGAATGTGAATATCTGGAATACA
TTCGACGCAAGAACATGCCTTTGTATGGAGCCGTCATTCAAAAGCTGAAA
GAAGAGAGATATGACGGTTTGGCCAACGACCAAAAACCGATGTATGACGG
TGGAAACTCTTATGAGATGAATTAAGACAACGTTTGAGCGCCAAACCCGG
CAACATCTTGCTACCATCCTTCGCATTCTGTGAAGTACACGAAGCAGCGC
AAGATATCAAGAATGTCATCACTAACAAGCATAAGTTCGTCTGTGAGCTC
TCACAACATATCTTGTATCAATATGTCTTCATCATTTGTTGGTTCACTAT
GGTCATCTCCATCGCTGTTGCAGTCCTTGGATTCATCATGCAAATTGCTG
AACATATTATGACAATGGCTTGCTTTATGAAGGGAGGTGCACCAGCAAGA
TAATGATGCAGAGGGTATCGTGAAGAATTATTTCAACTACAAGATCAACA
GTGAGTTTCGTATGCGAATGCGAATTATTGGGAATATTATGATCAAACTC
CTTTACATTGTTGGCAATGTTGCAGCTTTCTTGATTGTGGATGGGGTTTT
GAACGGTGACTATAAGACGTATGGTATCACTTGGACCACGTGGTCGAAAT
TACCCAACTCGATGGCTTACGATTATATGGATGGCGATTACAGATAGTAT
CAAACAAATTCTTTCGGTCAAAATCAAGCCTAGACATGATTCCTACTCTG
ATCAATTCTCTCGCATCTTCATGGTCAAAATCATGATGATAAGCGCTTTG
TTGGTCGGGTTGAGCTGGTACACCGATAAAATTAATTGTATCATTCCTTC
AGCTCTCGGTGTAGATGGGAACTTCGTAGCTCAAGCATGCTGGATCAACG
GTTTGTACGTTTACAAGGATATTCGTTACCATGTCAACGATATTGGTTAC
TATGGGTTGCCACGGGATATCAATAATGACGGAATGTTCGAAAATGGTGA
CATTTGCGCCACAACTGATTCCTCACATCGAGTGAACGAGAAATGCCGCC
CTATGGAAAAGACCTTCTATTTACAATACCAGTATATGACCTTCATCATG
GCCGCCCTCGCTGTGTTGTATTACGCCCCATACGCCTTCTTCAGACTGAT
CAACCAAGATATTGTTTCCTTGAAAGGCTCCATAAATGGAAAATGTACCA
AGTGTTGACATTGAGAGAATGTGAATATCTGGAATACATTCGACGCAAGA
ACATGCCTTTGTATGGAGCCGTCATTCAAAAGCTGAAAGAAGAGAGATAT
GACGGTTTGGCCAACGACCAAAAACCGATGTATGACGGTGGAAACTCTTA
TGAGATGAATTAAGACAACGTTTGAGCGCCAAACCCGGCAACATCTTGCT
ACCATCCTTCGCATTCTGTGAAGTACACGAAGCAGCGCAAGATATCAAGA
ATGTCATCACTAACAAGCATAAGTTCGTCTGTGAGCTCTCACAACATATC
TTGTATCAATATGTCTTCATCATTTGTTGGTTCACTATGGTCATCTCCAT
CGCTGTTGCAGTCCTTGGATTCATCATGCAAATTGCTGAACATATTATGA
CAATGGCTTGCTTTATGAAGGGAGGTGCACCAGCAAGATAATGATGCAGA
GGGTATCGTGAAGAATTATTTCAACTACAAGATCAACAGTGAGTTTCGTA
TGCGAATGCGAATTATTGGGAATATTATGATCAAACTCCTTTACATTGTT
GGCAATGTTGCAGCTTTCTTGATTGTGGATGGGGTTTTGAACGGTGACTA
TAAGACGTATGGTATCACTTGGACCACGTGGTCGAAATTACCCAACTCGA
TGGCTTACGATTATATGGATGGCGATTACAGATAGTATCAAACAAATTCT
TTCGGTCAAAATCAAGCCTAGACATGATTCCTACTCTGATCAATTCTCTC
GCATCTTCATGGTCAAAATCATGATGATAAGCGCTTTGTTGGTCGGGTTG
AGCTGGTACACCGATAAAATTAATTGTATCATTCCTTCAGCTCTCGGTGT
AGATGGGAACTTCGTAGCTCAAGCATGCTGGATCAACGGTTTGTACGTTT
ACAAGGATATTCGTTACCATGTCAACGATATTGGTTACTATGGGTTGCCA
CGGGATATCAATAATGACGGAATGTTCGAAAATGGTGACATTTGCGCCAC
AACTGATTCCTCACATCGAGTGAACGAGAAATGCCGCCCTATGGAAAAGA
CCTTCTATTTACAATACCAGTATATGACCTTCATCATGGCCGCCCTCGCT
GTGTTGTATTACGCCCCATACGCCTTCTTCAGACTGATCAACCAAGATAT
TGTTTCCTTGAAAGGCTCCATAAATGGAAAATGTACCAAGTGTTGACATT
GAGAGAATGTGAATATCTGGAATACATTCGACGCAAGAACATGCCTTTGT
ATGGAGCCGTCATTCAAAAGCTGAAAGAAGAGAGATATGACGGTTTGGCC
AACGACCAAAAACCGATGTATGACGGTGGAAACTCTTATGAGATGAATTA
AGACAACGTTTGAGCGCCAAACCCGGCAACATCTTGCTACCATCCTTCGC
ATTCTGTGAAGTACACGAAGCAGCGCAAGATATCAAGAATGTCATCACTA
ACAAGCATAAGTTCGTCTGTGAGCTCTCACAACATATCTTGTATCAATAT
GTCTTCATCATTTGTTGGTTCACTATGGTCATCTCCATCGCTGTTGCAGT
CCTTGGATTCATCATGCAAATTGCTGAACATATTATGACAATGGCTTGCT
TTATGAAGGGAGGTGCACCAGCAAGATAATGATGCAGAGGGTATCGTGAA
GAATTATTTCAACTACAAGATCAACAGTGAGTTTCGTATGCGAATGCGAA
TTATTGGGAATATTATGATCAAACTCCTTTACATTGTTGGCAATGTTGCA
GCTTTCTTGATTGTGGATGGGGTTTTGAACGGTGACTATAAGACGTATGG
TATCACTTGGACCACGTGGTCGAAATTACCCAACTCGATGGCTTACGATT
ATATGGATGGCGATTACAGATAGTATCAAACAAATTCTTTCGGTCAAAAT
CAAGCCTAGACATGATTCCTACTCTGATCAATTCTCTCGCATCTTCATGG
TCAAAATCATGATGATAAGCGCTTTGTTGGTCGGGTTGAGCTGGTACACC
GATAAAATTAATTGTATCATTCCTTCAGCTCTCGGTGTAGATGGGAACTT
CGTAGCTCAAGCATGCTGGATCAACGGTTTGTACGTTTACAAGGATATTC
GTTACCATGTCAACGATATTGGTTACTATGGGTTGCCACGGGATATCAAT
AATGACGGAATGTTCGAAAATGGTGACATTTGCGCCACAACTGATTCCTC
ACATCGAGTGAACGAGAAATGCCGCCCTATGGAAAAGACCTTCTATTTAC
AATACCAGTATATGACCTTCATCATGGCCGCCCTCGCTGTGTTGTATTAC
GCCCCATACGCCTTCTTCAGACTGATCAACCAAGATATTGTTTCCTTGAA
AGGCTCCATAAATGGAAAATGTACCAAGTGTTGACATTGAGAGAATGTGA
ATATCTGGAATACATTCGACGCAAGAACATGCCTTTGTATGGAGCCGTCA
TTCAAAAGCTGAAAGAAGAGAGATATGACGGTTTGGCCAACGACCAAAAA
CCGATGTATGACGGTGGAAACTCTTATGAGATGAATTAAGACAACGTTTG
AGCGCCAAACCCGGCAACATCTTGCTACCATCCTTCGCATTCTGTGAAGT
ACACGAAGCAGCGCAAGATATCAAGAATGTCATCACTAACAAGCATAAGT
TCGTCTGTGAGCTCTCACAACATATCTTGTATCAATATGTCTTCATCATT
TGTTGGTTCACTATGGTCATCTCCATCGCTGTTGCAGTCCTTGGATTCAT
CATGCAAATTGCTGAACATATTATGACAATGGCTTGCTTTATGAAGGGAG
GTGCACCAGCAAGATAATGATGCAGAGGGTATCGTGAAGAATTATTTCAA
CTACAAGATCAACAGTGAGTTTCGTATGCGAATGCGAATTATTGGGAATA
TTATGATCAAACTCCTTTACATTGTTGGCAATGTTGCAGCTTTCTTGATT
GTGGATGGGGTTTTGAACGGTGACTATAAGACGTATGGTATCACTTGGAC
CACGTGGTCGAAATTACCCAACTCGATGGCTTACGATTATATGGATGGCG
ATTACAGATAGTATCAAACAAATTCTTTCGGTCAAAATCAAGCCTAGACA
TGATTCCTACTCTGATCAATTCTCTCGCATCTTCATGGTCAAAATCATGA
TGATAAGCGCTTTGTTGGTCGGGTTGAGCTGGTACACCGATAAAATTAAT
TGTATCATTCCTTCAGCTCTCGGTGTAGATGGGAACTTCGTAGCTCAAGC
ATGCTGGATCAACGGTTTGTACGTTTACAAGGATATTCGTTACCATGTCA
ACGATATTGGTTACTATGGGTTGCCACGGGATATCAATAATGACGGAATG
TTCGAAAATGGTGACATTTGCGCCACAACTGATTCCTCACATCGAGTGAA
CGAGAAATGCCGCCCTATGGAAAAGACCTTCTATTTACAATACCAGTATA
TGACCTTCATCATGGCCGCCCTCGCTGTGTTGTATTACGCCCCATACGCC
TTCTTCAGACTGATCAACCAAGATATTGTTTCCTTGAAAGGCTCCATAAA
TG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013735XLOC_013735Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024465-exon-sc0000499-1575043694:121488..121698TCONS_00024465-exon-sc0000499-1575043694:121488..121698Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1575043694:120435..120966TCONS_00024465-exon-sc0000499-1575043694:120435..120966Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1575043694:118478..118708TCONS_00024465-exon-sc0000499-1575043694:118478..118708Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1575043694:117920..118193TCONS_00024465-exon-sc0000499-1575043694:117920..118193Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1575043694:116618..117510TCONS_00024465-exon-sc0000499-1575043694:116618..117510Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1510915933:121488..121698TCONS_00024465-exon-sc0000499-1510915933:121488..121698Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1510915933:120435..120966TCONS_00024465-exon-sc0000499-1510915933:120435..120966Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1510915933:118478..118708TCONS_00024465-exon-sc0000499-1510915933:118478..118708Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1510915933:117920..118193TCONS_00024465-exon-sc0000499-1510915933:117920..118193Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1510915933:116618..117510TCONS_00024465-exon-sc0000499-1510915933:116618..117510Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1491911889:121488..121698TCONS_00024465-exon-sc0000499-1491911889:121488..121698Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1491911889:120435..120966TCONS_00024465-exon-sc0000499-1491911889:120435..120966Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1491911889:118478..118708TCONS_00024465-exon-sc0000499-1491911889:118478..118708Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1491911889:117920..118193TCONS_00024465-exon-sc0000499-1491911889:117920..118193Clytia hemisphaericaexon
TCONS_00024465-exon-sc0000499-1491911889:116618..117510TCONS_00024465-exon-sc0000499-1491911889:116618..117510Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
InnexinTCONS_00024465-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000499supercontigsc0000499:116618..121698 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	24.9647	22.2216	52.4567	65.1777	28.0478	26.6641	19.2244	27.3363	38.5348	29.3922	79.9816	94.0168	49.6899	55.9932	53.0983	47.35	12.5589	12.3478	13.9163	11.7997	15.7654	17.5689	3.36065	4.57808	64.0027	71.941
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000990Innexin
Vocabulary: Cellular Component
TermDefinition
GO:0005921gap junction
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005921 gap junction
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024465 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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