TCONS_00024402 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024402
Unique NameTCONS_00024402
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1857

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024402 ID=TCONS_00024402|Name=TCONS_00024402|organism=Clytia hemisphaerica|type=transcript|length=1857bp
TCTAAAACATGCTGATGTATTGCAGAAATCATCTATCACGGTTAAAACTG
TCAAATAAAGTTATAATTTCTTCATCTCAATGCGGATGTTCCACTCAAGT
CTCCCCACCTTTAAAGAAGAAACGAAAACTAATATACGCTAAGGGTAAAA
CATTTGTAGATTGGAAGCGTATCTATATCAAGTCGGGTAATGGTTCAGCC
TCATTTTTTCATTCAAGGGACCATAAAGGGGGGCCAGATGGTGGTGACGG
AGGACGTGGAGCTGATGTCATTTTCATTGCTGATGATGCTTACTCCCAAC
TTTCTCATCTGGAGCATCAATACCGTGCTAAGAATGGAGGGAATGGTTCC
AAGAAAAACAGGCATGGAAAGAATGGAGAACACATACATATACATGTAAG
TGTgttaatatgtttttattgtttttattaaatgGNAAATGGAGAACACA
TGCATATACAGATCCCCGTGGGTACTGTGATTACGAACTCAAATAGTGAC
AAAGAACTAGCAGATTTAACGAGAAAGGGAGAAGCATATACAGTTGCCAA
GGGTGGATCTAAAGGTCTTGGTAATGTCCATTTCAAGTCACCTACAAGAG
TGCGCCCAAGAGAGTTCACAGAGGGAGGAACAGGAGAAGAAATATTTGTA
GAGTTGGAACTGAAATCAATCGCTGATATTGGCTTGGTGGGCTTTCCGAA
TGCTGGTAAATCTTCTCTCCTCCATTGCATTTCACGTGCAACACCAAAGA
TTGGAGATTACCCTTTCACAACATTGAAACCAAACATCGGTGTGATGAAT
TTAAAAGATGACTTGACTGTTTCAGTTGCTGATATCCCTGGCATAGTCAA
GGGAGCCCACGAAAACGTTGGTCTTGGACATGAATTCTTACGCCACGTTG
AACGTTGCCATATGTTAATGTATGTTATGGATTGCTCATCACCGGACATG
CTTTCCCAGTTCGAAATCCTGAAAAAGGAGTTAGATCTTTACAAAGCTGG
ACTGTCAACAATATCATCCATCTTCATAGCGAATAAAATCGATTTGATAC
AAGACCAAGACGAAATGAGAAATAACATACAACAACATGTAAACATGCCT
GTTGTCCCACTCTCTGctaaattcaatcaaaatattgaaGAGTTGAAAAG
TCTTATATTGCAGAAAAGGAAATTTAAGCATACTAGCTAATgagaaaaga
aaaacgaaaaatagaTTATATGTTATGGATTGCTCATCACCAGACATGCT
TTCCCAGTTCGAAATCCTGAAAACGGAGTTAGATCTTTACAAAGCTGGAC
TGTCAACAATATCATCCATCTTCATAGCTAATAAAATCGATTTGATACAA
GACCAAGACGAAATGAGAAATGACATACAACAACATGTAAACATGCCCTT
TGTCCCACTCTCTGCTAAATTCAGTCAAAATATTGAAGAGTTGAAAAGTC
TTATATTGCAGAAATGGAAATTTAAGCATACTGGCTAAtgggaaaagaaa
aatgaaaaatagattaTATGTTGTGGTTTGTTCATCACCGGACATGCTTT
CCCAGTTCGAAATCCTGAAAAAGGAGTTAGATCTTTACAAAGCTGGACTG
TCAACAATATCATCCATCTTCATAGCGAATAAAATCGATTTGATACAAGA
CCAAGACGAGATGAGAAATAACATACAACAACATGTAAACATGCCTGTTG
TCCCACTCTCTGAGTAAATTCAGTCAAAATATTGAAGAgttgaaaaatct
tttattgCAGAAATGGAAATTTAAGCATACTGGCTaatgagaaaagaaaa
atgaaaaatagattatttaggttgtattttatttcttttaaagtatGATG
TTTGGTG
Run BLAST on NCBI

transcript from alignment at sc0000491:51610..61421-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024402 ID=TCONS_00024402|Name=TCONS_00024402|organism=Clytia hemisphaerica|type=transcript|length=9812bp|location=Sequence derived from alignment at sc0000491:51610..61421- (Clytia hemisphaerica)
TCTAAAACATGCTGATGTATTGCAGAAATCATCTATCACGGTTAAAACTG
TCAAATAAAGTTATAATTTCTTCATCTCAATGCGGATGTTCCACTCAAGT
CTCCCCACCTTTAAAGAAGAAACGAAAACTAATATACGCTAAGGGTTGGT
ATTTACCATGTAGTTTATTTTCTATTGTCTAAATAATAACTGTAAGTTGG
TCTAATATCGACATCCCTCCTCTAATTCCGACACCCTTCTTTAGAGACAG
GAATAATATGAAAGCTTTTGAATCACTGATTGAAAAAGGATTATTCCTCT
CAGACCACTAAGCAAAGTAAAACAGTTTTAACCTTACTATCAATTTCAGG
TGATAAAAAGGGTGTCGGAATTAGGGGAGGGGTGTCGACATTAGACTAAG
TTACGGAGGTATATAAGCTAATTTATTGTATGTTCTGTGATTGAAAACCT
TGGTTTGAAAACTATAATGAGAATGCAACCTTTCCTTAATCCTAATTGGT
TGATCACAAATTCCATTGCATTTTTCATTTTGCCAGGTAAAACATTTGTA
GATTGGAAGCGTATCTATATCAAGTCGGGTAATGGTTCAGCCTCATTTTT
TCATTCAAGGTATGTATAACGTATTCCTATTTGAATCAAGACATTCTTAT
ATAGAAAAACAATACACAAAAACAATAACATTATATAAAAGATGTGCACT
AGAAAGGTGTCATCAGCGTTTTTTGGAGCTCTTTGNCTCTATGTCTCTCC
TTTCACTTTCTTCCTTCCGTTTTTGTTCTTCGGCAGATTTTATATCTTCT
TTTTGCTTCTTGGTAATCTTGGCGTATGTTTTCTTTGATGTTTCCTTTAT
TATTTCTGCTGTGTGCTTTATTTCCTCCTTTATCATGCTTCTTGTCTTTT
CCTCCATCTCTTGTAGTTTTCCTGCCAGAAAGGTTTTTAGGTCATATACC
TCATTGTTCAGTTTTTGTATGACGTCGTCTTTCTTTTGAAGTTCATTTTG
CATCATATGTTGAGTGTTTTTCCCTACTTTATTTCTTAGGTTTTTCGTTA
TTCGTACGCAGTTTGAACATAAGTAATGATCGTTGTAGGATGTCACGAAT
ATTTGTAGTTGATACAGGGGTAANNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTGTTTTCATGAATTTTGATG
TTTTTATTTGTTTTCAGCCATTTTTTCGAAGAGCGTTGCAAAAGCGTCTG
ATCTAGTTGACGTCAAATAAAAACTGATCTTAGTAACTGATCAAAGTCAG
TTGCTTAAAAAAACTCTACCTTTTCCGTTATAAATCTTTCAAAGCAAGCG
ATTAATTCTTTCTTTCCAAATGCAAGCAATGGGAGTTACAATGGGGATCT
TCCTTTTTAAAGGGATGGGAGGAGAGAAAAAGAAATCAAATTTAATTGTT
GCATGGTAGTTCTTAATTCTTTTTTTCGAAGTTGATTACAAATAAACTGA
ATGTGCATTAAGAAACTTGAACAAAAGACAGAATTTCGACAAACAGAGAG
CTAAGGTAACTCAATAGCAAACTAGATTTCGGAAAGGGCTAGCTTGTTTT
TACCGAGTTTGTTATTTATTGCTCTTTGTACCCACCTTCTAGCTGTTCTA
ATGTAAATGGTTTTGACAACACAACATTATTATTTTACCAAAAAAATCAT
GATCGATTCTATTTTTTTGTAGGACGAGTTTAGCTACAATATATAGACTC
AATGTATCTTTTCCTCTCCTGTTTACTTTCTACTTACATGAAAAAATGTA
ACTCAGGAGCGACACCAGAGTGCAAAAATACATAACCTGTTGAGACTTCT
CTGTTCTGTATGATTATGAGCTTGATAAACAATAATGATCGTAAAACAAT
TTTAGATATTCTCTTTCTAAAACATGCTGATGTATTGCAGAAATCATCTA
TCACGGTTAAAACTCTCAAATAAAGTTATAATTTCTTCACCTCAATGCGG
ATGTTCCACTGAAGTCTCCCCACCTTTAAAGAAGAAACGAAAACTAATAT
ACGCTAAGGGTTGGTATTTATGATGTAGTTTATTTTCTATTGTCTAAATA
ATAACTGTAAGTTGGTCTAATATCGACATCCCTCCTTTAATTCCGACACC
CTTCTTTAGAGACAGGAATAATATGAAAGCTTGAATCACTGATTGAAAAA
GGATTATTCCTCTCAGACCACTAAGCAAAGAAAAACAGTTTTAACCTTTC
TATCAATTTCAGGTGATAAAAAGGGTGTCGGAATTAGAGGAGGGGTGTCG
ACATTAAGTTACGTAAGTATAAAGCTAATTTATTGTATGTTCTGTGATTG
AAGACCTTGGTTTGAAAACTATAATGAGAATGCAACCTTTCCTTAATCCT
AATTTGTTGATTACAAATTCCATTGCATTTTTCATTTTGCCAGGTAAAAC
ATTTGTAGATTGGAAGCGTATCTATATCAAGTCGGGTAATGGTGGGAATG
GTTCAGCCTCATTTGTTCACTCAAGGTATGTATAACGTATTCCTATTTGA
ATCGAGACATTCTTATATAGATATACACAAAAACAATAACATATCATATA
AAAGATGTGCACTAGAAAGGTGTCATCAGCGTTTTTTGGAGCTCTTTGTT
TAAAAAGCAATTGAAATAACAACTTTGAATTTGAAGACCCCCTTTTTAAA
CAGCTGTTTGTAGTAAATTTTCCAATTCTCACAAATCAAATATTATAACA
GTGTCAAATGTCAAATGTCAAATCAAGTGTCAAATGGAGGGGTTGCCAGT
TCAATTCCAAGCTAGGTTAAAAATTAGATAATCAGACCCTTGGACAAATG
GGAAACGGGGCTAAACTTAAAATGTTTTTGCTTCTTTTTTATGAGAAAAA
AGTGTAACCAAGATAACAATGATAGGTGTTTATTGCCTGGCACTAAGCAC
TCAAAAATATTTTGAATATCAAAAGAGTGGACTGCGTGGATGAGTAGCAA
GTCACCAAGCCTCTTCAAATGAATGTAACAACCTCCTTGAAAACAAAAGG
AAAGGTCAATTATGGACCAATTCTTTTAGAGAAAAAAATATCTTGATTTC
TATTCTATTTTAATTAATTTGTTAGCTCATTTTAGAAATTTAATAGGTCT
TTGATCTCTCTGATCAGTCTGAATTCTAATTGAGAAAATTATATTAAAAA
AGGAATATGTGAAATTCTTTCATTACGCCATTAGAGCTCAAAAAACACCA
ATGAGACCTTCCTATGTGCACATCTTAGGAATAGTTCAATTCAAATAAAA
ACGTTATATAATTATTTTTGAATTGAAACTAATGAAACATATGATTCTCA
TTTTACTCTTAAAATAATTATAAATGCTTTCTTGCAGTTTCTTAAAATAT
TTTTTTTTCAGTTGGTCCCTTTGATTGTGGTCTTTTTTCTAAAACGAAAT
TCATTGCTTCAAATTAGCTCATTGAACAAATTTGATTTTTTCTTCATAAG
GGACCATAAAGGGGGGCCAGATGGTGGTGACGGAGGACGTGGAGCTGATG
TCATTTTCATTGCTGATGATGCTTACTCCCAACTTTCTCATCTGGAGCAT
CAATACCGTGCTAAGAATGGAGGGAATGGTTCCAAGAAAAACAGGCATGG
AAAGAATGGAGAACACATACATATACATGTAAGTGTGTTAATATGTTTTT
ATTGTTTTTATTAAATGGNAAATGGAGAACACATGCATATACAGGTAAGT
GTGTCAATATATTTTCTTATTGATTAAGTGGAATGTCCTTGTTTATGTTT
TTCTGTAGAAATAATTTTGAAACTACTTAAAAGCTACTTTGAAATATTTT
TGTGGTCATGCTTCTCTAAATATTAAAATATTATAAGCAACATAAAATAT
AAACATTGTTCGAGACATGTCCTGCACGTTTTTTTTATAAGGAACTTTAA
CTTGGCTCCAAGTCTGGATTTCCTTATTTTTCCAGAGAATTTCAGCCTCA
AAGTTCCTTAACGGGGCTCTTATTTACTAAGCTGCCAAGTTTGGATTAAT
AGGTTACTTTGTTAAACAATGGACTACAATACAGAAAAACGCGTTTTTCA
ACATTGTTTTGTCAATATTTATAAACGTTTTGTTTAGATTTTTGTAAACG
CGTACAAGTTCAAGTTTAACTTGTACTGTTTCTTAACTTTTTTTCTTATT
CTCAGCCTGAGCAGTTCCTTAACAATTCCTTGTTTTTTAAACCATTTTCA
GCCTCAAGTTCCTTATAAACAACGTGTTCCTTATAAAACAAAGACAGCAT
GTGTGATTTTTAGATTTTAGATTTTTGATTTGGGATATAGTTTTTTTTGT
AACTATTTTTATGTGCCTTTCAACTGATCCAGTGACAACACTTTTTTGAA
TTCTTTACACTATTGAAACATCTTTACATTTTTATTTTGGCTGCAGATCC
CCGTGGGTACTGTGATTACGAACTCAAATAGTGACAAAGAACTAGCAGAT
TTAACGAGAAAGGGAGAAGCATATACAGTTGCCAAGGGTGGATCTAAAGG
TAGGCACATCACATCTACTTTGGAGCAAAATCGACTATAATTGCAAGGTC
AATTTTCTTTCTTATTATGTTATTTCCATTGCATGACTTTGTAATAATTC
TTCATTAATTTTAATGATTAATTAATATAAATTAATCATAATTTTTAATT
TAAGGCCTAGGGGGTAATCCAGAAGAAAGCAACTTATTAATTAATCTTTT
GTGATTCTTTTTTCTTTACGAGATGATAGCTGTGAATGAAATAGTTGTTT
TGCATTTTTGGTAACTTTTAAAAGGTCTTGGTAATGTCCATTTCAAGTCA
CCTACAAGAGTGCGCCCAAGAGAGTTCACAGAGGGAGGAACAGGAGAAGA
AATATTTGTAGAGTTGGAACTGAAATCAATCGCTGATATTGGCTTGGTAT
GAGCATTTATTTGAATAGAGAATTAAAAATGACATCACTAGCCCCCTGTT
GCAATGAAATTGCGTCAAAANTGAAATCAATCGCTGATATTGGCTTGGTA
TGAGCATTTATTTGAATAGAGAATTAAAAATGACATCACTAGCCCCCTGT
TGCAATGAAATTGCGCCAAAAATGATTTTTTTTTGTCCAATCTCTCAAAG
GAATGCTCTAAATAAGTTTGAGTTTATCAACCCAGTGATATTCATAATGG
AAGTTAAATCGTAGCTTGGATCATGAGATTTACGTTTGGCTACGTTTCGA
GAGATTCTTCTCCCATCATCGGGAAATGTAGAGGATGTTTTCTCCACTGT
TTGTACTAAGACATTCTGTTATGGCGCGCCAAAGCGGAAATAAATACTAT
CTCTCATTTCGCGACACTACCTTTCATTTCACGACACTATCTTTCACTTT
GCGGCACTATCTTTCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCACTA
TCTTTCATTTCGCGACACTATCTTTCATTTCGCGACACTATCTTTTATTT
CGCGACACTATCTTTCATTTCGCGACACTATCTTTTATTTCGCCACACTA
TCTTTATTAAAACGACACTATCTTTTTTAAAACGACACTATCTTTTTTAA
AACGATACTATCTTTCCAAAAAACATTATCTTAATTGAAACAATACTATC
TTTTTTACGGGATACTATCTTTTTTATGGAAGCCGAGAAGTGCCATCGAC
AAAAAAATATTTAATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGT
GCCGCGAAATGAAAGATAGTGCCGCGAAATGAAAGATAGTGCCGCGAAAT
GAAAGATAGTGCCGCGAAATGAAAGATAGTATCGCGAAATGAAAGATACT
ATTTATTTCCGCTTTGGCGCGCCATATTCTGTACCCATAATTATCAAGTG
TAATTTCCTTGCAAGGTGTGAATCCCCATGTTATCATAGTTGTAAGGTAA
AATAGCTCTTGAACTTATGAGATTACTCATTACTGTGATTTCCATTTTGC
CTCTCTGTTCGGTTGGGAACCCAAATATTCTCTCAAATGAACTTTGTTTG
CATTTATAGGTGGGCTTTCCGAATGCTGGTAAATCTTCTCTCCTCCATTG
CATTTCACGTGCAACACCAAAGATTGGAGATTACCCTTTCACAACATTGA
AACCAAACATCGGTGTGATGAATTTAAAAGATGACTTGACTGTTTCAGGT
TTTTATCTTTCGTTTCCTTGTGTTAACACATTTCTGCCTATTACTTCTTA
GTAACATTACCTGACATTCTAAGAATTTCATAAAAGTTTGCTTGATTTTG
CTCCTCAATTTCTGAATATATGGGGTTTCAAATAATTTTCATGACTTTTA
GTGGATCATGTAAATTTGAGATATTTTATTCTTGTTTACTCATTAAAAAA
CCCAAATTATTTTTATTTGTAACCGTTTAGTTGCTGATATCCCTGGCATA
GTCAAGGGAGCCCACGAAAACGTTGGTCTTGGACATGAATTCTTACGCCA
CGTTGAACGTTGCCATATGTTAATGTATGTTATGGATTGCTCATCACCGG
ACATGCTTTCCCAGTTCGAAATCCTGAAAAAGGAGTTAGATCTTTACAAA
GCTGGACTGTCAACAATATCATCCATCTTCATAGCGAATAAAATCGATTT
GATACAAGACCAAGACGAAATGAGAAATAACATACAACAACATGTAAACA
TGCCTGTTGTCCCACTCTCTGCTAAATTCAATCAAAATATTGAAGAGTTG
AAAAGTCTTATATTGCAGAAAAGGAAATTTAAGCATACTAGCTAATGAGA
AAAGAAAAACGAAAAATAGATTATATGTTATGGATTGCTCATCACCAGAC
ATGCTTTCCCAGTTCGAAATCCTGAAAACGGAGTTAGATCTTTACAAAGC
TGGACTGTCAACAATATCATCCATCTTCATAGCTAATAAAATCGATTTGA
TACAAGACCAAGACGAAATGAGAAATGACATACAACAACATGTAAACATG
CCCTTTGTCCCACTCTCTGCTAAATTCAGTCAAAATATTGAAGAGTTGAA
AAGTCTTATATTGCAGAAATGGAAATTTAAGCATACTGGCTAATGGGAAA
AGAAAAATGAAAAATAGATTATATGTTGTGGTTTGTTCATCACCGGACAT
GCTTTCCCAGTTCGAAATCCTGAAAAAGGAGTTAGATCTTTACAAAGCTG
GACTGTCAACAATATCATCCATCTTCATAGCGAATAAAATCGATTTGATA
CAAGACCAAGACGAGATGAGAAATAACATACAACAACATGTAAACATGCC
TGTTGTCCCACTCTCTGAGTAAATTCAGTCAAAATATTGAAGAGTTGAAA
AATCTTTTATTGCAGAAATGGAAATTTAAGCATACTGGCTAATGAGAAAA
GAAAAATGAAAAATAGATTATTTAGGTTGTATTTTATTTCTTTTAAAGTA
TGATGTTTGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013697XLOC_013697Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024402-exon-sc0000491-1575043694:61278..61421TCONS_00024402-exon-sc0000491-1575043694:61278..61421Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1575043694:60813..60885TCONS_00024402-exon-sc0000491-1575043694:60813..60885Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1575043694:56678..56921TCONS_00024402-exon-sc0000491-1575043694:56678..56921Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1575043694:55873..55975TCONS_00024402-exon-sc0000491-1575043694:55873..55975Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1575043694:55476..55597TCONS_00024402-exon-sc0000491-1575043694:55476..55597Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1575043694:52874..53012TCONS_00024402-exon-sc0000491-1575043694:52874..53012Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1575043694:51610..52641TCONS_00024402-exon-sc0000491-1575043694:51610..52641Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1510915933:61278..61421TCONS_00024402-exon-sc0000491-1510915933:61278..61421Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1510915933:60813..60885TCONS_00024402-exon-sc0000491-1510915933:60813..60885Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1510915933:56678..56921TCONS_00024402-exon-sc0000491-1510915933:56678..56921Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1510915933:55873..55975TCONS_00024402-exon-sc0000491-1510915933:55873..55975Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1510915933:55476..55597TCONS_00024402-exon-sc0000491-1510915933:55476..55597Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1510915933:52874..53012TCONS_00024402-exon-sc0000491-1510915933:52874..53012Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1510915933:51610..52641TCONS_00024402-exon-sc0000491-1510915933:51610..52641Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1491911889:61278..61421TCONS_00024402-exon-sc0000491-1491911889:61278..61421Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1491911889:60813..60885TCONS_00024402-exon-sc0000491-1491911889:60813..60885Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1491911889:56678..56921TCONS_00024402-exon-sc0000491-1491911889:56678..56921Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1491911889:55873..55975TCONS_00024402-exon-sc0000491-1491911889:55873..55975Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1491911889:55476..55597TCONS_00024402-exon-sc0000491-1491911889:55476..55597Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1491911889:52874..53012TCONS_00024402-exon-sc0000491-1491911889:52874..53012Clytia hemisphaericaexon
TCONS_00024402-exon-sc0000491-1491911889:51610..52641TCONS_00024402-exon-sc0000491-1491911889:51610..52641Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000491supercontigsc0000491:51610..61421 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	2.21232e-08	5.52042e-10	0.515664	0	0.0165104	0.000257887	0	0	1.45191e-07	0	0	0	0	0	0	0	0	0	0	0	0.792659	0.880676	0	0	0	0
Blast
[Close]
BLAST of TCONS_00024402 vs. Swiss-Prot (Human)
Match: MTG2 (Mitochondrial ribosome-associated GTPase 2 OS=Homo sapiens GN=MTG2 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 8.952e-59
Identity = 132/337 (39.17%), Postives = 195/337 (57.86%), Query Frame = 3 
Query:  147 KTFVDWKRIYIKSGNGSA--SFFHSRDHKXXXXXXXXXXXXX--VIFIADDAYSQLSHLEHQYRAKNGGNGSKKNRHGKNGEHIHIHVSVLICFYCFY*MXNGEHMHIQIPVGTVITNSNSDKELADLTRKGEAYTVAKGGSKGLGNVHFKSPTRVRPREFXXXXXXXXIFVELELKSIADIGLVGFPNAGKSSLLHCISRATPKIGDYPFTTLKPNIGVMNLKDDLTVSVADIPGIVKGAHENVGLGHEFLRHVERCHMLMYVMDCSSPDMLSQFEILKKELDLYKAGLSTISSIFIANKIDLIQDQDEMRNNIQQHVNMPVVPLSAKFNQNIEEL 1145
            + FVD++R+ +  GNG A  S FHS   K       G  G    VI   D     LS +  +Y+  +G +G  KN  G++G       +VL               +I++PVGT++      + +ADL+  G+ Y  A GG+ G GN  F +     P   T G  G++  + LELK++A  G+VGFPNAGKSSLL  IS A P +  YPFTTLKP++G+++ +  L ++VADIPGI++GAH+N GLG  FLRH+ERC  L++V+D S P+  +Q + LK EL++Y+ GLS      +ANKIDL + Q  + + ++ H+   V+ LSA   +N+E+L
Sbjct:   70 RYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSG-------AVL---------------YIRVPVGTLVKEGG--RVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANL-SQLRDHLGQEVIVLSALTGENLEQL 381
The following BLAST results are available for this feature:
BLAST of TCONS_00024402 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTG28.952e-5939.17Mitochondrial ribosome-associated GTPase 2 OS=Homo... [more]
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