TCONS_00024290 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024290
Unique NameTCONS_00024290
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3815

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024290 ID=TCONS_00024290|Name=TCONS_00024290|organism=Clytia hemisphaerica|type=transcript|length=3815bp
GATAATGTGCAAAAGCTCAACATCAAGCTATGTATTAAACTGATCTTTCT
ATCAAAagcatttattttgattttagatttttagatcACTACAGaattgt
taaaaagagaaattcatCATATCAAGATGGAAGGGGTTGTAGAGCAACTG
AACGCTCTCTTAGCACCAAAATTTGGCTATGGACTACTAACAGATGCTAG
TTTTAGTGAAAACACAGTTGAAGCATTTGAAAAACTTGTAAGCATCTTAC
AAGGAGCTGAGAATGTAGCCGCCGAAAAGGCAGCACAACTGGCGAAAGAT
AATACACCAAAAACGGGAGATACTGCTTTTGTGTACTGGCATGGTCATGG
TTGGTTTACAGCCAAAATTGAAAGCTGGCTACCTGAGGAATTGAACTACA
TGATTCGTTGGACTGAAGGGAACTGGGCACCAGAACGAGCCAAATATAAC
AACTTGTGTGTTGATAAGATTCCAGACCCTTCTATTATTGGTGTTGGATC
AAAAGTCCTTTTCAAACAAGGTCTTTATTATGCTGGTAATAATGATGATG
GATCTGTCTGTGATAGTTCTGGTCGTTCTTTATCCGAAGAAAAGAAACAA
GAGCTGCAAGCCAAGAATCAAATTTCGGACAGATGGCATATGGGTGTTAT
TAAGAATGTATCCACGAATTCTGAAGGTGTGACCGTCTACAATGGTGAGC
ATATAGAACCACAAGATCCTCAATGCACTAGGGGCAACTTTGTTGATTAC
AGTCCCGCTTTCTCTGGTTTGACTATCGAGGAATTGAGAACCTTACCCAA
TATCTTCAACTGCTTGGATACTGGAGATGATAACGGAGAGACTTCCTCAT
GTGATGTGTTCTTATCCAAAGTCAACCAAGATGATGCTAACATTCTTAAA
ATTCtcaaacaaatcaaaaccaTTTATAATGTTTCTGAATCTAAAGGTGG
CAACAGTTCATCTAAAGGTCTACAACAGACTGTTGGGAAGATCAAGAATT
GCAAGGTCTACCTGGTAGCCTTAACAGATGCGTTCATTGCTAACGAGCAA
GCAATGTCAGAGTTACTGTACGCTAAGAAGACCCTTGGCAAGACTGTTAT
TCCTTTGGTGTTGGGTACCAGCCATAAATGGACACAAACTACAGCTGGTA
TGCTGTTAGCAGGACAGCTCTACATTCAATTCGCTAATGACGATGTGTAC
GATGAAAAACTAACCGAACTTCAAAAGAACTTGGAGAAGTTGGTAGTATG
TGATCCAAAAGCTAAGAAGACAAGATCTGGAGGTGATTCTGACCCACCAA
GAGTGTTTTTATCCTATTGTTGGGCCAACTCAAAATTATCTCATGAGGCC
GAGCAAGTCCGTTCATTCACTGGTCATACATTCTCAGATCCAAGGAAAAT
CAAAGCTGATATAGAGAAAGAGATTGGGGAGAGAGTCTGGTTGGATATTG
AACAACTGGATAGTGTAGATGATTCTGGAATGTTTGGTCAAATTGCTCAA
GGTTTGGCAGAATCAACTGTGGTTGTTATGTGTGTATCTGCTGAATATTC
CAGGAGTCAGAATTGTCAAATGGAAGCTAATTTCGCGTTACGATCCTTAC
ATAAAAAGGCTATCGTGCTGGAAGTTGGTACAGGTGAGGATTCAGACCGA
GCAGCCTGGAAACAAAGCAGTGTTGGAATGGTTTTACCAACAGATCAAGA
ACCTCTTATTATGACTGCTGATCACATCACAGGGGAGGCGTCATATCAAG
CGACTATTACGAAAATTTGTCAACAAATCCGAGAGGTTGTCCCTGAAGAT
GGAACTCGGGTTCTACCTCAACATGAGCCGGAAACGGAAGCGGAAATCGC
CAATAAAGAATCCTTACGTGCCAGTGTTCCAATGTATGGAGATTCAGTCA
TTGCACATTATGCTCAATGGCAATTCTTTCCAGCTAAGGTggtaaatttt
gataaatctgTATTGAAATATACAGTAGATTGGGATGATCCAGATCCAGC
TTGTCGTGTTCAAAGATACGATCTTGTGGCGGTGAATCGGGCGCCAACTG
AGAACGCCATAGGTCTGGGAACAAGTATCTTATTCAAACAAGGTACTTAT
CAACATAATGGCGGAACAGGAGATGTCTGGAATCTTGGCGAGATTACCAA
TATTGAAGTTTTGGATGATGGTTCGAAATTATATTCTGGTAAACATTCAA
AAACGGCTGCAGACAATTTAGCTGTTGCTGGGTGGAGCTCTTTCAGACCA
ACTTTTGAGAAGCACAAAATTGAAGATTTGAGATTATTTCCGAATGCTAT
TGAAATGTTACAAGCGTACCAAAAACTTTAATCCAAACCCACTGCGGTGA
AAAAATTGAGTGAGCTGAACTAAAATATGAACAATATTTATAAAGTCAAA
TAAATTAAGTGTATATTAAGCAATGTAAAAAAGATTGGAAaagatgaaaa
gtaaaaaaaaaactttattcgaTCTCTAATCAATAATNATGTAAAAAAGA
TTGGAAaagatgaaaagtaaaaaaaaaactttattcgaTCTCTAATCAAT
Aatggaatcaattttttcatgttttttatattttttcatgttttttataa
gaacaaagtattgCATGAAGGCTTCGGTGTCAAATAAATAAAGATAATTT
AAAATGACATTCAACGGATTTGAAGACTCTACAATTCACAGNTGGAAtca
attttttcatgttttttatattttttcatgttttttataagaacaaagta
ttgCATGAAGGCTTCGGTGtcaaataaataaagaaaatttaaaatgacaT
TCAACGGCTTTGAAGACTCCACAATtcacatttttcttataagaacatcc
aaactttttgagatttaagccaaaaaatgttcttaacatgttcttatttc
tttcattttttgagtaattttgtccattttcctatgaaactGGGTGTTTT
AGAactttgttcttaacattttggccattgaagccttatgttcttatata
gtttgttcttataaaaaaacatgtatgcaaTCTATACTGATTATAATAAG
AACAACCCTGGAAAAtattttgacgttcttataagtATCAGAATCACTTT
GAATGTAAATAATGTTTGTTTTGACTCataaattataacaattttgtAGC
AAGTATTTATGTTAAAATTAGTATATTTGAATTTGCAATTTTGAGAAATA
ATCCAATAACTtgatcttaacattttggccatcgaagctttatgttctta
tatagtttgttcttataaaaaacgtgtatgcaatTTATACTAACACGATG
TGCTGATTATAATAAGAACAGCCNTccaaactttttgagatttaagccaa
aaaatgttcttaacatgttcttatttctttcattttttgagtaattttgt
ccattttcctatgaaattgggtgttttagaactttgttcttaacattttg
gccattgaagcctcatgttcttatatagtttgttcttataaaaaacatgt
atgcaaTTTATACTAACACGATGTGCTGATTATAATAAGAACAACTctgg
aaaatattttgacattCTTATAAGTATCAGAATCactttgaatgtaaaaa
atggTTGTTTTGACTCataaattataacaattttgtAGCAAGTATTTATG
TTAAAATTAGTATATTTGAATTTGCAATTTTGAGAAATAATCcaataatt
ttcatttaatGTGTACAAAAAAATGTTCgagtgaaataaaaaattataat
aatcGAAAAGGTTTTTCTGTTTGTTAAAAACCGCAATCTCATTTTGGATT
Ggacagaaaaaaatt
Run BLAST on NCBI

protein sequence of TCONS_00024290-protein

>TCONS_00024290-protein ID=TCONS_00024290-protein|Name=TCONS_00024290-protein|organism=Clytia hemisphaerica|type=polypeptide|length=734bp
MEGVVEQLNALLAPKFGYGLLTDASFSENTVEAFEKLVSILQGAENVAAE
KAAQLAKDNTPKTGDTAFVYWHGHGWFTAKIESWLPEELNYMIRWTEGNW
APERAKYNNLCVDKIPDPSIIGVGSKVLFKQGLYYAGNNDDGSVCDSSGR
SLSEEKKQELQAKNQISDRWHMGVIKNVSTNSEGVTVYNGEHIEPQDPQC
TRGNFVDYSPAFSGLTIEELRTLPNIFNCLDTGDDNGETSSCDVFLSKVN
QDDANILKILKQIKTIYNVSESKGGNSSSKGLQQTVGKIKNCKVYLVALT
DAFIANEQAMSELLYAKKTLGKTVIPLVLGTSHKWTQTTAGMLLAGQLYI
QFANDDVYDEKLTELQKNLEKLVVCDPKAKKTRSGGDSDPPRVFLSYCWA
NSKLSHEAEQVRSFTGHTFSDPRKIKADIEKEIGERVWLDIEQLDSVDDS
GMFGQIAQGLAESTVVVMCVSAEYSRSQNCQMEANFALRSLHKKAIVLEV
GTGEDSDRAAWKQSSVGMVLPTDQEPLIMTADHITGEASYQATITKICQQ
IREVVPEDGTRVLPQHEPETEAEIANKESLRASVPMYGDSVIAHYAQWQF
FPAKVVNFDKSVLKYTVDWDDPDPACRVQRYDLVAVNRAPTENAIGLGTS
ILFKQGTYQHNGGTGDVWNLGEITNIEVLDDGSKLYSGKHSKTAADNLAV
AGWSSFRPTFEKHKIEDLRLFPNAIEMLQAYQKL
Run BLAST on NCBI

transcript from alignment at sc0000486:90937..95354-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024290 ID=TCONS_00024290|Name=TCONS_00024290|organism=Clytia hemisphaerica|type=transcript|length=4418bp|location=Sequence derived from alignment at sc0000486:90937..95354- (Clytia hemisphaerica)
GATAATGTGCAAAAGCTCAACATCAAGCTATGTATTAAACTGATCTTTCT ATCAAAAGCATTTATTTTGATTTTAGATTTTTAGATCACTACAGAATTGT TAAAAAGAGAAATTCATCATATCAAGATGGAAGGGGTTGTAGAGCAACTG AACGCTCTCTTAGCACCAAAATTTGGCTATGGACTACTAACAGATGCTAG TTTTAGTGAAAACACAGTTGAAGCATTTGAAAAACTTGTAAGCATCTTAC AAGGAGCTGAGAATGTAGCCGCCGAAAAGGCAGCACAACTGGCGAAAGAT AATACACCAAAAACGGGAGATACTGCTTTTGTGTACTGGCATGGTCATGG TTGGTTTACAGCCAAAATTGAAAGCTGGCTACCTGAGGAATTGAACTACA TGATTCGTTGGACTGAAGGGAACTGGGCACCAGAACGAGCCAAATATAAC AACTTGTGTGTTGATAAGATTCCAGACCCTTCTATTATTGGTGTTGGATC AAAAGTCCTTTTCAAACAAGGTCTTTATTATGCTGGTAATAATGATGATG GATCTGTCTGTGATAGTTCTGGTCGTTCTTTATCCGAAGAAAAGAAACAA GAGCTGCAAGCCAAGAATCAAATTTCGGACAGATGGCATATGGGTGTTAT TAAGAATGTATCCACGAATTCTGAAGGTGTGACCGTCTACAATGGTGAGC ATATAGAACCACAAGATCCTCAATGCACTAGGGGCAACTTTGTTGATTAC AGTCCCGCTTTCTCTGGTTTGACTATCGAGGAATTGAGAACCTTACCCAA TATCTTCAACTGCTTGGATACTGGAGATGATAACGGAGAGACTTCCTCAT GTGATGTGTTCTTATCCAAAGTCAACCAAGATGATGCTAACATTCTTAAA ATTCTCAAACAAATCAAAACCATTTATAATGTTTCTGAATCTAAAGGTGG CAACAGTTCATCTAAAGGTCTACAACAGACTGTTGGGAAGATCAAGAATT GCAAGGTCTACCTGGTAGCCTTAACAGATGCGTTCATTGCTAACGAGCAA GCAATGTCAGAGTTACTGTACGCTAAGAAGACCCTTGGCAAGACTGTTAT TCCTTTGGTGTTGGGTACCAGCCATAAATGGACACAAACTACAGCTGGTA TGCTGTTAGCAGGTAAGTTTGTATTACTTTTAGTACATACACGAGTGTTT TTTGAATAATTGGTTACCCTACAACTGAATTTGTAATTGATTTATAAAAA TTCTTTGATGCATCATGAAAAATAGCACTTAAAGAATAAGACAATGCTAT CATTTTCCGACAAAGAGGGATATGCCTGTTTTTTTTTTTGTACGTTACTC AAATTTTCAGATCAGATTTGAGGTTGGTTAGCATTCTAGCTCATTCTCTG AAAAATTTGCTTTGACCACTCCTGATATTTATTAAATTACTTATTGGGTC AAGGGCTATCGTTTGCCATGGTTAGATTATCTAAAACTTTACTTTTACGA GATAGTGCACAAAATAGCTAATTTGAGTCCTGGAGCCTTTAGCAACCTTG TCTCTTAAGAAAAAAATGTTCAATATAAAATACTAGTCTTGATCAAGGAC ACTATACAAGTGTCCTTGTCTTGATATTAACATTAATAATATTTAACATC ATGTTTCCACGTTGAAATTTTAGGACAGCTCTACATTCAATTCGCTAATG ACGATGTGTACGATGAAAAACTAACCGANAATATTTAACATCATGTTTCC ACGTTGAAATTTTAGGACAGCTCTACATTCAATTCGCTAATGACGATGTG TACGATGAAAAACTAACCGAACTTCAAAAGAACTTGGAGAAGTTGGTAGT ATGTGATCCAAAAGCTAAGAAGACAAGATCTGGAGGTGATTCTGACCCAC CAAGAGTGTTTTTATCCTATTGTTGGGCCAACTCAAAATTATCTCATGAG GCCGAGCAAGTCCGTTCATTCACTGGTCATACATTCTCAGATCCAAGGAA AATCAAAGCTGATATAGAGAAAGAGATTGGGGAGAGAGTCTGGTTGGATA TTGAACAACTGGATAGTGTAGATGATTCTGGAATGTTTGGTCAAATTGCT CAAGGTTTGGCAGAATCAACTGTGGTTGTTATGTGTGTATCTGCTGAATA TTCCAGGAGTCAGAATTGTCAAATGGAAGCTAATTTCGCGTTACGATCCT TACATAAAAAGGCTATCGTGCTGGAAGTTGGTACAGGTGAGGATTCAGAC CGAGCAGCCTGGAAACAAAGCAGTGTTGGAATGGTTTTACCAACAGATCA AGAACCTCTTATTATGACTGCTGATCACATCACAGGGGAGGCGTCATATC AAGCGACTATTACGAAAATTTGTCAACAAATCCGAGAGGTTGTCCCTGAA GATGGAACTCGGGTTCTACCTCAACATGAGCCGGAAACGGAAGCGGAAAT CGCCAATAAAGAATCCTTACGTGCCAGTGTTCCAATGTATGGAGATTCAG TCATTGCACATTATGCTCAATGGCAATTCTTTCCAGCTAAGGTGGTAAAT TTTGATAAATCTGTATTGAAATATACAGTAGATTGGGATGATCCAGATCC AGCTTGTCGTGTTCAAAGATACGATCTTGTGGCGGTGAATCGGGCGCCAA CTGAGAACGCCATAGGTCTGGGAACAAGTATCTTATTCAAACAAGGTACT TATCAACATAATGGCGGAACAGGAGATGTCTGGAATCTTGGCGAGATTAC CAATATTGAAGTTTTGGATGATGGTTCGAAATTATATTCTGGTAAACATT CAAAAACGGCTGCAGACAATTTAGCTGTTGCTGGGTGGAGCTCTTTCAGA CCAACTTTTGAGAAGCACAAAATTGAAGATTTGAGATTATTTCCGAATGC TATTGAAATGTTACAAGCGTACCAAAAACTTTAATCCAAACCCACTGCGG TGAAAAAATTGAGTGAGCTGAACTAAAATATGAACAATATTTATAAAGTC AAATAAATTAAGTGTATATTAAGCAATGTAAAAAAGATTGGAAAAGATGA AAAGTAAAAAAAAAACTTTATTCGATCTCTAATCAATAATNATGTAAAAA AGATTGGAAAAGATGAAAAGTAAAAAAAAAACTTTATTCGATCTCTAATC AATAATGGAATCAATTTTTTCATGTTTTTTATATTTTTTCATGTTTTTTA TAAGAACAAAGTATTGCATGAAGGCTTCGGTGTCAAATAAATAAAGATAA TTTAAAATGACATTCAACGGATTTGAAGACTCTACAATTCACAGNTGGAA TCAATTTTTTCATGTTTTTTATATTTTTTCATGTTTTTTATAAGAACAAA GTATTGCATGAAGGCTTCGGTGTCAAATAAATAAAGAAAATTTAAAATGA CATTCAACGGCTTTGAAGACTCCACAATTCACATTTTTCTTATAAGAACA TCCAAACTTTTTGAGATTTAAGCCAAAAAATGTTCTTAACATGTTCTTAT TTCTTTCATTTTTTGAGTAATTTTGTCCATTTTCCTATGAAACTGGGTGT TTTAGAACTTTGTTCTTAACATTTTGGCCATTGAAGCCTTATGTTCTTAT ATAGTTTGTTCTTATAAAAAAACATGTATGCAATCTATACTGATTATAAT AAGAACAACCCTGGAAAATATTTTGACGTTCTTATAAGTATCAGAATCAC TTTGAATGTAAATAATGTTTGTTTTGACTCATAAATTATAACAATTTTGT AGCAAGTATTTATGTTAAAATTAGTATATTTGAATTTGCAATTTTGAGAA ATAATCCAATAACTTGATCTTAACATTTTGGCCATCGAAGCTTTATGTTC TTATATAGTTTGTTCTTATAAAAAACGTGTATGCAATTTATACTAACACG ATGTGCTGATTATAATAAGAACAGCCNTCCAAACTTTTTGAGATTTAAGC CAAAAAATGTTCTTAACATGTTCTTATTTCTTTCATTTTTTGAGTAATTT TGTCCATTTTCCTATGAAATTGGGTGTTTTAGAACTTTGTTCTTAACATT TTGGCCATTGAAGCCTCATGTTCTTATATAGTTTGTTCTTATAAAAAACA TGTATGCAATTTATACTAACACGATGTGCTGATTATAATAAGAACAACTC TGGAAAATATTTTGACATTCTTATAAGTATCAGAATCACTTTGAATGTAA AAAATGGTTGTTTTGACTCATAAATTATAACAATTTTGTAGCAAGTATTT ATGTTAAAATTAGTATATTTGAATTTGCAATTTTGAGAAATAATCCAATA ATTTTCATTTAATGTGTACAAAAAAATGTTCGAGTGAAATAAAAAATTAT AATAATCGAAAAGGTTTTTCTGTTTGTTAAAAACCGCAATCTCATTTTGG ATTGGACAGAAAAAAATT

Coding sequence (CDS) from alignment at sc0000486:90937..95354-

>TCONS_00024290 ID=TCONS_00024290|Name=TCONS_00024290|organism=Clytia hemisphaerica|type=CDS|length=4410bp|location=Sequence derived from alignment at sc0000486:90937..95354- (Clytia hemisphaerica)
GACAGCTCTACATTCAATTCGCTAATGACGATGTGTACGATGAAAAACTA
ACCGAACTTCAAAAGAACTTGGAGAAGTTGGTAGTATGTGATCCAAAAGC
TAAGAAGACAAGATCTGGAGGTGATTCTGACCCACCAAGAGTGTTTTTAT
CCTATTGTTGGGCCAACTCAAAATTATCTCATGAGGCCGAGCAAGTCCGT
TCATTCACTGGTCATACATTCTCAGATCCAAGGAAAATCAAAGCTGATAT
AGAGAAAGAGATTGGGGAGAGAGTCTGGTTGGATATTGAACAACTGGATA
GTGTAGATGATTCTGGAATGTTTGGTCAAATTGCTCAAGGTTTGGCAGAA
TCAACTGTGGTTGTTATGTGTGTATCTGCTGAATATTCCAGGAGTCAGAA
TTGTCAAATGGAAGCTAATTTCGCGTTACGATCCTTACATAAAAAGGCTA
TCGTGCTGGAAGTTGGTACAGGTGAGGATTCAGACCGAGCAGCCTGGAAA
CAAAGCAGTGTTGGAATGGTTTTACCAACAGATCAAGAACCTCTTATTAT
GACTGCTGATCACATCACAGGGGAGGCGTCATATCAAGCGACTATTACGA
AAATTTGTCAACAAATCCGAGAGGTTGTCCCTGAAGATGGAACTCGGGTT
CTACCTCAACATGAGCCGGAAACGGAAGCGGAAATCGCCAATAAAGAATC
CTTACGTGCCAGTGTTCCAATGTATGGAGATTCAGTCATTGCACATTATG
CTCAATGGCAATTCTTTCCAGCTAAGGTGGTAAATTTTGATAAATCTGTA
TTGAAATATACAGTAGATTGGGATGATCCAGATCCAGCTTGTCGTGTTCA
AAGATACGATCTTGTGGCGGTGAATCGGGCGCCAACTGAGAACGCCATAG
GTCTGGGAACAAGTATCTTATTCAAACAAGGTACTTATCAACATAATGGC
GGAACAGGAGATGTCTGGAATCTTGGCGAGATTACCAATATTGAAGTTTT
GGATGATGGTTCGAAATTATATTCTGGTAAACATTCAAAAACGGCTGCAG
ACAATTTAGCTGTTGCTGGGTGGAGCTCTTTCAGACCAACTTTTGAGAAG
CACAAAATTGAAGATTTGAGATTATTTCCGAATGCTATTGAAATGTTACA
AGCGTACCAAAAACTTTAAATGGAAGGGGTTGTAGAGCAACTGAACGCTC
TCTTAGCACCAAAATTTGGCTATGGACTACTAACAGATGCTAGTTTTAGT
GAAAACACAGTTGAAGCATTTGAAAAACTTGTAAGCATCTTACAAGGAGC
TGAGAATGTAGCCGCCGAAAAGGCAGCACAACTGGCGAAAGATAATACAC
CAAAAACGGGAGATACTGCTTTTGTGTACTGGCATGGTCATGGTTGGTTT
ACAGCCAAAATTGAAAGCTGGCTACCTGAGGAATTGAACTACATGATTCG
TTGGACTGAAGGGAACTGGGCACCAGAACGAGCCAAATATAACAACTTGT
GTGTTGATAAGATTCCAGACCCTTCTATTATTGGTGTTGGATCAAAAGTC
CTTTTCAAACAAGGTCTTTATTATGCTGGTAATAATGATGATGGATCTGT
CTGTGATAGTTCTGGTCGTTCTTTATCCGAAGAAAAGAAACAAGAGCTGC
AAGCCAAGAATCAAATTTCGGACAGATGGCATATGGGTGTTATTAAGAAT
GTATCCACGAATTCTGAAGGTGTGACCGTCTACAATGGTGAGCATATAGA
ACCACAAGATCCTCAATGCACTAGGGGCAACTTTGTTGATTACAGTCCCG
CTTTCTCTGGTTTGACTATCGAGGAATTGAGAACCTTACCCAATATCTTC
AACTGCTTGGATACTGGAGATGATAACGGAGAGACTTCCTCATGTGATGT
GTTCTTATCCAAAGTCAACCAAGATGATGCTAACATTCTTAAAATTCTCA
AACAAATCAAAACCATTTATAATGTTTCTGAATCTAAAGGTGGCAACAGT
TCATCTAAAGGTCTACAACAGACTGTTGGGAAGATCAAGAATTGCAAGGT
CTACCTGGTAGCCTTAACAGATGCGTTCATTGCTAACGAGCAAGCAATGT
CAGAGTTACTGTACGCTAAGAAGACCCTTGGCAAGACTGTTATTCCTTTG
GTGTTGGGTACCAGCCATAAATGGACACAAACTACAGCTGGTATGCTGTT
AGCAGGACAGCTCTACATTCAATTCGCTAATGACGATGTGTACGATGAAA
AACTAACCGAACTTCAAAAGAACTTGGAGAAGTTGGTAGTATGTGATCCA
AAAGCTAAGAAGACAAGATCTGGAGGTGATTCTGACCCACCAAGAGTGTT
TTTATCCTATTGTTGGGCCAACTCAAAATTATCTCATGAGGCCGAGCAAG
TCCGTTCATTCACTGGTCATACATTCTCAGATCCAAGGAAAATCAAAGCT
GATATAGAGAAAGAGATTGGGGAGAGAGTCTGGTTGGATATTGAACAACT
GGATAGTGTAGATGATTCTGGAATGTTTGGTCAAATTGCTCAAGGTTTGG
CAGAATCAACTGTGGTTGTTATGTGTGTATCTGCTGAATATTCCAGGAGT
CAGAATTGTCAAATGGAAGCTAATTTCGCGTTACGATCCTTACATAAAAA
GGCTATCGTGCTGGAAGTTGGTACAGGTGAGGATTCAGACCGAGCAGCCT
GGAAACAAAGCAGTGTTGGAATGGTTTTACCAACAGATCAAGAACCTCTT
ATTATGACTGCTGATCACATCACAGGGGAGGCGTCATATCAAGCGACTAT
TACGAAAATTTGTCAACAAATCCGAGAGGTTGTCCCTGAAGATGGAACTC
GGGTTCTACCTCAACATGAGCCGGAAACGGAAGCGGAAATCGCCAATAAA
GAATCCTTACGTGCCAGTGTTCCAATGTATGGAGATTCAGTCATTGCACA
TTATGCTCAATGGCAATTCTTTCCAGCTAAGGTGGTAAATTTTGATAAAT
CTGTATTGAAATATACAGTAGATTGGGATGATCCAGATCCAGCTTGTCGT
GTTCAAAGATACGATCTTGTGGCGGTGAATCGGGCGCCAACTGAGAACGC
CATAGGTCTGGGAACAAGTATCTTATTCAAACAAGGTACTTATCAACATA
ATGGCGGAACAGGAGATGTCTGGAATCTTGGCGAGATTACCAATATTGAA
GTTTTGGATGATGGTTCGAAATTATATTCTGGTAAACATTCAAAAACGGC
TGCAGACAATTTAGCTGTTGCTGGGTGGAGCTCTTTCAGACCAACTTTTG
AGAAGCACAAAATTGAAGATTTGAGATTATTTCCGAATGCTATTGAAATG
TTACAAGCGTACCAAAAACTTTAAATGGAAGGGGTTGTAGAGCAACTGAA
CGCTCTCTTAGCACCAAAATTTGGCTATGGACTACTAACAGATGCTAGTT
TTAGTGAAAACACAGTTGAAGCATTTGAAAAACTTGTAAGCATCTTACAA
GGAGCTGAGAATGTAGCCGCCGAAAAGGCAGCACAACTGGCGAAAGATAA
TACACCAAAAACGGGAGATACTGCTTTTGTGTACTGGCATGGTCATGGTT
GGTTTACAGCCAAAATTGAAAGCTGGCTACCTGAGGAATTGAACTACATG
ATTCGTTGGACTGAAGGGAACTGGGCACCAGAACGAGCCAAATATAACAA
CTTGTGTGTTGATAAGATTCCAGACCCTTCTATTATTGGTGTTGGATCAA
AAGTCCTTTTCAAACAAGGTCTTTATTATGCTGGTAATAATGATGATGGA
TCTGTCTGTGATAGTTCTGGTCGTTCTTTATCCGAAGAAAAGAAACAAGA
GCTGCAAGCCAAGAATCAAATTTCGGACAGATGGCATATGGGTGTTATTA
AGAATGTATCCACGAATTCTGAAGGTGTGACCGTCTACAATGGTGAGCAT
ATAGAACCACAAGATCCTCAATGCACTAGGGGCAACTTTGTTGATTACAG
TCCCGCTTTCTCTGGTTTGACTATCGAGGAATTGAGAACCTTACCCAATA
TCTTCAACTGCTTGGATACTGGAGATGATAACGGAGAGACTTCCTCATGT
GATGTGTTCTTATCCAAAGTCAACCAAGATGATGCTAACATTCTTAAAAT
TCTCAAACAAATCAAAACCATTTATAATGTTTCTGAATCTAAAGGTGGCA
ACAGTTCATCTAAAGGTCTACAACAGACTGTTGGGAAGATCAAGAATTGC
AAGGTCTACCTGGTAGCCTTAACAGATGCGTTCATTGCTAACGAGCAAGC
AATGTCAGAGTTACTGTACGCTAAGAAGACCCTTGGCAAGACTGTTATTC
CTTTGGTGTTGGGTACCAGCCATAAATGGACACAAACTACAGCTGGTATG
CTGTTAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013632XLOC_013632Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024290-proteinTCONS_00024290-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024290-exon-sc0000486-1575043694:94193..95354TCONS_00024290-exon-sc0000486-1575043694:94193..95354Clytia hemisphaericaexon
TCONS_00024290-exon-sc0000486-1575043694:90937..93589TCONS_00024290-exon-sc0000486-1575043694:90937..93589Clytia hemisphaericaexon
TCONS_00024290-exon-sc0000486-1510915933:94193..95354TCONS_00024290-exon-sc0000486-1510915933:94193..95354Clytia hemisphaericaexon
TCONS_00024290-exon-sc0000486-1510915933:90937..93589TCONS_00024290-exon-sc0000486-1510915933:90937..93589Clytia hemisphaericaexon
TCONS_00024290-exon-sc0000486-1491911889:94193..95354TCONS_00024290-exon-sc0000486-1491911889:94193..95354Clytia hemisphaericaexon
TCONS_00024290-exon-sc0000486-1491911889:90937..93589TCONS_00024290-exon-sc0000486-1491911889:90937..93589Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000486supercontigsc0000486:90937..95354 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.111229 9.8309 7.89799 10.622 10.2367 18.2245 20.1644 14.8945 13.756 9.13099 3.69235 0.55193 0.370191 4.28682 6.35706 9.81588 8.92008 15.5063 11.689 4.31856 5.44602 4.17434 4.88972 0.333199 0.401527 0.152272 0.0620564
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000157TIR_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024290 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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