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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024252 ID=TCONS_00024252|Name=TCONS_00024252|organism=Clytia hemisphaerica|type=transcript|length=1697bp
TACATTGTACATACGTCTCGCgattttattttagatttttttgaatctat
tttttttcttcaatttttcaaataactcatacaaagaaaaaatatatata
cacaccaaaaaatatattcaaagttAGGACTTCTAGTTCTATAGAAGAGA
TATTATctagaaaaagtatcaaaaaatcataaaagctgtaaaaataattt
tatccaTATAAAAGCAAAAGAATTTAATTAAAATTCTATAAAGTAAAGTA
TGAGTCATCAAATGCAATAATGACGAGTTACGCTTGGTTTAAATTGGATT
TGGCCATAATTGcttattgtttttaaaagttgTTAATTATTGGCTTTCTC
AAGTATTGCAATCGAATCCAATAATTATAGAATATCTACATTGGTTAGAA
TATCAACGTTTTGAGCAAATTAGACTCGTTAATATCTATACTTAATAGCA
AAAACCATGTACTTTTTCCCTTTAAAAAGATACCCAAATAGATCCGATAT
CTAACAGTGAGAGTGCAGAATCTCGAATGCCAAGTCCGTGTTAAAACCAT
TCTTTTTCCAGCTCTGATCTGGTCTATTTGTGTCAACGGGATGAGGATCT
CCTTCTCTTTCTCATAGCATTGGACCATCGGAGTCTGCCAATAAACTTCC
AATCACATGGTTAAACATCGTAACTGTTCGAGTCATTAAAGTTTTCGAAT
GACAATTATACATGACCAAACTACGCTTTAATGTTATTAAAGGATACTCC
CGGTGGGTGGGGGAACACTCAATTTAAAAACGACCGcacgtgcggcccaa
aattagacttttgaaatctgactcttacagtgcagagaaaatttaaccaa
aaatttgagtaaatttggacgaaaatcgacccttacggtgcactTTTGAA
AGCATGGAAAAATGACATTTAAGAGCCGCACGTACGGtcggtcgtttacc
ttgagccCCACGGGGGATACTCTATCTAGTCATCAGCCATTGCAGCATAA
TTTGGTGGTTGCTGTTGACGATTCTGAACAAATTGTTGCGCTGCTTGAAT
CTCAGGATGTTGATAAAACTGTTGCTCAGTTTGTTGAGGGACTGTTGCAA
ACTGTTTGATATTCTGTTGTTCTTGAGGCTGGGTTGGATGAAAAAACTGT
TGAGGCTGTTTTTGTTGGTATGTTTGTTGAGGTGCTGTAAAttgtttaat
ttgttgttcttgtTGATGCTGTGACCGAGTTTGTTGAATAAGTTGTTGAA
GCTGTTTTTGTTGATATTGTTGTTGTATAGATCCTACAAATTGTTTGATA
TCTTGTTGCTGTTGTGGTTGTTGTTGCTGATTATAAAAATGTTGAGTACT
TTGTTGAGCATTTTGTTGAGGAGCAAAATGTTGTTTCTGTGGTGCAACAG
ATTGTTGTGGTtgtagttgttgttgttgttgttgaaagtTTTGCTGTGCT
GGACGATTTTGAATCTTTGCTTTTGGTGaagctaaaaaaaacaaaacaag
ctagatgctgaatagacctacctgatgatgaaagttagatagcaatgcaa
ggagaaaaatgaaaaaaaatcagtcagaaaacatatagcgtttagcgaaa
atgcataacgcaagaaattcatcattgattgatggtagggggagagggaa
gggttgtagggaaaaaatagatagaaagttctggtcgcaaaaatcag Run BLAST on NCBI transcript from alignment at sc0000482:220062..221795- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024252 ID=TCONS_00024252|Name=TCONS_00024252|organism=Clytia hemisphaerica|type=transcript|length=1734bp|location=Sequence derived from alignment at sc0000482:220062..221795- (Clytia hemisphaerica)
TACATTGTACATACGTCTCGCGATTTTATTTTAGATTTTTTTGAATCTAT
TTTTTTTCTTCAATTTTTCAAATAACTCATACAAAGAAAAAATATATATA
CACACCAAAAAATATATTCAAAGTTAGGACTTCTAGTTCTATAGAAGAGA
TATTATCTAGAAAAAGTATCAAAAAATCATAAAAGCTGTAAAAATAATTT
TATCCATATAAAAGCAAAAGAATTTAATTAAAATTCTATAAAGTAAAGTA
TGAGTCATCAAATGCAATTTTAACGTTTTCTGAATGTGATGATGATAAAA
AACATAATGACGAGTTACGCTTGGTTTAAATTGGATTTGGCCATAATTGC
TTATTGTTTTTAAAAGTTGTTAATTATTGGCTTTCTCAAGTATTGCAATC
GAATCCAATAATTATAGAATATCTACATTGGTTAGAATATCAACGTTTTG
AGCAAATTAGACTCGTTAATATCTATACTTAATAGCAAAAACCATGTACT
TTTTCCCTTTAAAAAGATACCCAAATAGATCCGATATCTAACAGTGAGAG
TGCAGAATCTCGAATGCCAAGTCCGTGTTAAAACCATTCTTTTTCCAGCT
CTGATCTGGTCTATTTGTGTCAACGGGATGAGGATCTCCTTCTCTTTCTC
ATAGCATTGGACCATCGGAGTCTGCCAATAAACTTCCAATCACATGGTTA
AACATCGTAACTGTTCGAGTCATTAAAGTTTTCGAATGACAATTATACAT
GACCAAACTACGCTTTAATGTTATTAAAGGATACTCCCGGTGGGTGGGGG
AACACTCAATTTAAAAACGACCGCACGTGCGGCCCAAAATTAGACTTTTG
AAATCTGACTCTTACAGTGCAGAGAAAATTTAACCAAAAATTTGAGTAAA
TTTGGACGAAAATCGACCCTTACGGTGCACTTTTGAAAGCATGGAAAAAT
GACATTTAAGAGCCGCACGTACGGTCGGTCGTTTACCTTGAGCCCCACGG
GGGATACTCTATCTAGTCATCAGCCATTGCAGCATAATTTGGTGGTTGCT
GTTGACGATTCTGAACAAATTGTTGCGCTGCTTGAATCTCAGGATGTTGA
TAAAACTGTTGCTCAGTTTGTTGAGGGACTGTTGCAAACTGTTTGATATT
CTGTTGTTCTTGAGGCTGGGTTGGATGAAAAAACTGTTGAGGCTGTTTTT
GTTGGTATGTTTGTTGAGGTGCTGTAAATTGTTTAATTTGTTGTTCTTGT
TGATGCTGTGACCGAGTTTGTTGAATAAGTTGTTGAAGCTGTTTTTGTTG
ATATTGTTGTTGTATAGATCCTACAAATTGTTTGATATCTTGTTGCTGTT
GTGGTTGTTGTTGCTGATTATAAAAATGTTGAGTACTTTGTTGAGCATTT
TGTTGAGGAGCAAAATGTTGTTTCTGTGGTGCAACAGATTGTTGTGGTTG
TAGTTGTTGTTGTTGTTGTTGAAAGTTTTGCTGTGCTGGACGATTTTGAA
TCTTTGCTTTTGGTGAAGCTAAAAAAAACAAAACAAGCTAGATGCTGAAT
AGACCTACCTGATGATGAAAGTTAGATAGCAATGCAAGGAGAAAAATGAA
AAAAAATCAGTCAGAAAACATATAGCGTTTAGCGAAAATGCATAACGCAA
GAAATTCATCATTGATTGATGGTAGGGGGAGAGGGAAGGGTTGTAGGGAA
AAAATAGATAGAAAGTTCTGGTCGCAAAAATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024252-exon-sc0000482-1575043694:221530..221795 | TCONS_00024252-exon-sc0000482-1575043694:221530..221795 | Clytia hemisphaerica | exon |
| TCONS_00024252-exon-sc0000482-1575043694:220062..221492 | TCONS_00024252-exon-sc0000482-1575043694:220062..221492 | Clytia hemisphaerica | exon |
| TCONS_00024252-exon-sc0000482-1510915933:221530..221795 | TCONS_00024252-exon-sc0000482-1510915933:221530..221795 | Clytia hemisphaerica | exon |
| TCONS_00024252-exon-sc0000482-1510915933:220062..221492 | TCONS_00024252-exon-sc0000482-1510915933:220062..221492 | Clytia hemisphaerica | exon |
| TCONS_00024252-exon-sc0000482-1491911889:221530..221795 | TCONS_00024252-exon-sc0000482-1491911889:221530..221795 | Clytia hemisphaerica | exon |
| TCONS_00024252-exon-sc0000482-1491911889:220062..221492 | TCONS_00024252-exon-sc0000482-1491911889:220062..221492 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000482 | supercontig | sc0000482:220062..221795 - |
Blast
The following BLAST results are available for this feature:
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