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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024237 ID=TCONS_00024237|Name=TCONS_00024237|organism=Clytia hemisphaerica|type=transcript|length=777bp
aaattttaaaaagttaaaattttctgaaaaaccattcgaaaatttttatt
ctattttgagAAAACGATGGAAGTTAATTTAAAGCTTTTATCATTCTTAG
CATTATGTATTGGGCTCGTTTCCGCCATTCGGTTTCGGCCCATGAGACCC
GGAGAACCACTGGAATATTTCTCAATGCCAAATTATATCCAAAATGACAC
AGAGCTTCTGATCAAGAGAGATGAGCTCCGACCTTTTTCAATGGACAGTT
TtacttttggtaattttgggaACGCTACCAGACAGTCAGgaGTCAAAGAA
GAGAACTCGATGAAAAGATCTGATTGGAGTAAATATCAAGTGGACTATGT
TTTATCCGATCTTACTGGAAGAACTCTTGGTGGTTTTACAAATAACATGT
TTACCGGCGACCAGTTCACATTGACGGtaattgatattttcatcagatta
cacgtttttttataagaacattcaaaatttttgaagcctttcgatgttct
taactttttcagtttcaagcctaaaaatgttcttattttgacaatctttt
ggatatttttcaccattttcctaagaaatatggtgtttttgagtccacaa
agcattaaaacgttcttaacttattcttaacattttcgctgtcaaagcct
tatgttcttatataatctgttcttataaaaaaagcgatTACATCGCTGAT
GTTTTTAACTTATTGAGTTTTCAGCTTAAAAAagttgttcttaaaatatt
cttattttcaccattctgtgattattt Run BLAST on NCBI transcript from alignment at sc0000482:247571..250098+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024237 ID=TCONS_00024237|Name=TCONS_00024237|organism=Clytia hemisphaerica|type=transcript|length=2528bp|location=Sequence derived from alignment at sc0000482:247571..250098+ (Clytia hemisphaerica)
aaattttaaaaagttaaaattttctgaaaaaccattcgaaaatttttatt
ctattttgagAAAACGATGGAAGTTAATTTAAAGCTTTTATCATTCTTAG
CATTATGTATTGGGCTCGTTTCCGCCATTCGGTTTCGGCCCATGAGACCC
GGAGAACCACTGGAATATTTCTCAATGCCAAATTATATCCAAAATGACAC
AGAGCTTCTGATCAAGAGAGATGAGCTCCGACCTTTTTCAATGGACAGTT
TtacttttggtaattttgggaACGCTACCAGACAGTCAGGTTAGTAATTG
ACCTTCTTCTTTAAAATCTCATTAAAATTTAGAGGAATAAATTTCAGTGT
GAAGAATTGGACGGATTTGGTGGATTTTAACCAAATCAAGTTGCCGTTAA
AGTTTCGTCTTTTTCCACTATCCGTCAAATACGGTTGCtgcaatcatggt
tgaaatataatgtgaattccggttatttgtttttcaagatttatagTTCC
GGTGAGAAAGTCGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcac
agtattatcttgatgtactttttcattgatttctaaaaagatttcactga
aatattgcgaaggcatttcgaggcacctcattaatttttgagttctttca
tcccagccattttgtgcttgtttaaatttcttggTGTTGATTTTATAATT
CAAGTGTATTATCAAAAGCATaccattaatgtctaaaacgcactgagaag
taagtattaacgacaaagcAATCAAATtcaccattaaagatgctacatta
ctgatttcttgatcaacaaatagtcatcaaatacgacagagatagaataa
cagaaattcagatgttatcattccagccgcggctttcttatactatggta
cGAATTAGACTTCCCGTTCGAGTTTGCAAGTATTAAAAGTGTACAAGTCT
CTATCCAAGATAATTAAcattatttaactttttttttaaggaGTCAAAGA
AGAGAACTCGATGAAAAGATCTGATTGGAGTAAATATCAAGTGGACTATG
TTTTATCCGATCTTACTGGAAGAACTCTTGGTGGTTTTACAAATAACATG
TTTACCGGCGACCAGTTCACATTGACGGtaattgatattttcatcagatt
acacgtttttttataagaacattcaaaatttttgaagcctttcgatgttc
ttaactttttcagtttcaagcctaaaaatgttcttattttgacaatcttt
tggatatttttcaccattttcctaagaaatatggtgtttttgagtccaca
aagcattaaaacgttcttaacttattcttaacattttcgctgtcaaagcc
ttatgttcttatataatctgttcttataaaaaaagcgatTACATCGCTGA
TGTTTTTAACTTATTGAGTTTTCAGCTTAAAAAagttgttcttaaaatat
tcttattttcaccattctgtgattattt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024237-exon-sc0000482-1491911889:247571..247859 | TCONS_00024237-exon-sc0000482-1491911889:247571..247859 | Clytia hemisphaerica | exon |
| TCONS_00024237-exon-sc0000482-1510915933:247571..247859 | TCONS_00024237-exon-sc0000482-1510915933:247571..247859 | Clytia hemisphaerica | exon |
| TCONS_00024237-exon-sc0000482-1575043694:247571..247859 | TCONS_00024237-exon-sc0000482-1575043694:247571..247859 | Clytia hemisphaerica | exon |
| TCONS_00024237-exon-sc0000482-1491911889:249611..250098 | TCONS_00024237-exon-sc0000482-1491911889:249611..250098 | Clytia hemisphaerica | exon |
| TCONS_00024237-exon-sc0000482-1510915933:249611..250098 | TCONS_00024237-exon-sc0000482-1510915933:249611..250098 | Clytia hemisphaerica | exon |
| TCONS_00024237-exon-sc0000482-1575043694:249611..250098 | TCONS_00024237-exon-sc0000482-1575043694:249611..250098 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000482 | supercontig | sc0000482:247571..250098 + |
Blast
The following BLAST results are available for this feature:
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