TCONS_00024188 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024188
Unique NameTCONS_00024188
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1380

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024188 ID=TCONS_00024188|Name=TCONS_00024188|organism=Clytia hemisphaerica|type=transcript|length=1380bp
CTGCATCTCACAAACTTTCAATCAGATCAACTTCGATCAATCAACAAACC
ACGCCGCCCATCATTCCACGTACAAACCCACCCTTATTCTTCCGGCACCC
TCGATTGAAGTTCTTAATTTCTGGCGCAGACGAACGGACAAGTGCACAAT
CACCGAACATTTCCAACAAAGACATCAAAGAGCTGCTTTCAGTAACATTC
AACATAGATGAAGGAGATGTCCAATTGACACAATTTAAtaaCATCAGTGG
ATACTTTGACGGAGAAATTTACTTTAACGCATCCAATGAAAAGACTGAAG
ACTGGGTCCGACAGAAATTGAGTGATCTTGATGGAATTCGAATTATTTAT
GTGCAAGAGCGATGTTGGACAGGAACTTGTGGTGATTCATTTTATAACAA
ATGCAAACAAGATACTAATCAGCTCAAATGCATCTGTCATACGGCGTTTG
TTGGTGAAAGATGTGGTGCTCTTCATATGGTTGACGGAATTACATATGGT
CCTTGGTCAAACTGGACAATGTGTCGATTATGCCAACAAAAGCGAATGAG
ATATTGCGTTCCCGCCCCTCTACATGGCGGCAAATGCATTGTGGGAAAGA
ATCCACAAATCGAGACGAGGACGTGTTATGATAAATGCTCAAGAGATGAT
GGAGATGAAGATCATGAATTGGTGGCATACGTGTTGGTGATTCTGTTGAT
CATTGTTCTCCTGTTGCTCATCATCTTCTGTTGCACATTCAAACACATCG
CTGGTGATCGAGACAAACAAACGCGAAGAAAAACATCAGCAGATAATGAT
TCCAGTATAGTATCAGTCACTCCAATTCTTGTTCGAAATCCTGGAAAATC
GTCACGTGGTCGGACTGGTAAAAACAACGATGGAAACTTAACCAATAGAT
CAATTAGTTTCGCTGGAGAGGATGAGTACGCAATACCGATGAAAGAATTT
GATGTCTCTAGTACGCATGCGCAGAGTTTGCAACAAAAGAATGGGTTTGA
TAACCTTGGATATCACAAAGCGAATGACGATAGTGATGATTTATATAGAA
AGCAGTTGGAAGCCTTTCTCAATGAAGCTCCAAATCTAACGCGCAATGGA
ATCACAATGGAAGAAATTGAACTACCTGATAAAATCGAAACTCCAATAGA
CACAGTCAATCATTTAGAACCCGAATATGCAGTACCTGAGAGACAAGTTC
CAGCTTCCTTTTCTCCAGCACTACGCAAACAAGAGGAAATTCAAAGCAAG
ATTATTGATCGCGGACCTACACCACATCAGTTAGCATTGGTTTCTTAACA
ATTCTGAATGACAGTTATTATGGATTGTGAATGGAATTTGGTGGTTCAAC
GTGTTGCTCACATCTATCGAATACTCAAAC
Run BLAST on NCBI

protein sequence of TCONS_00024188-protein

>TCONS_00024188-protein ID=TCONS_00024188-protein|Name=TCONS_00024188-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
ASHKLSIRSTSINQQTTPPIIPRTNPPLFFRHPRLKFLISGADERTSAQS
PNISNKDIKELLSVTFNIDEGDVQLTQFNNISGYFDGEIYFNASNEKTED
WVRQKLSDLDGIRIIYVQERCWTGTCGDSFYNKCKQDTNQLKCICHTAFV
GERCGALHMVDGITYGPWSNWTMCRLCQQKRMRYCVPAPLHGGKCIVGKN
PQIETRTCYDKCSRDDGDEDHELVAYVLVILLIIVLLLLIIFCCTFKHIA
GDRDKQTRRKTSADNDSSIVSVTPILVRNPGKSSRGRTGKNNDGNLTNRS
ISFAGEDEYAIPMKEFDVSSTHAQSLQQKNGFDNLGYHKANDDSDDLYRK
QLEAFLNEAPNLTRNGITMEEIELPDKIETPIDTVNHLEPEYAVPERQVP
ASFSPALRKQEEIQSKIIDRGPTPHQLALVS
Run BLAST on NCBI

transcript from alignment at sc0000478:15706..22061-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024188 ID=TCONS_00024188|Name=TCONS_00024188|organism=Clytia hemisphaerica|type=transcript|length=6356bp|location=Sequence derived from alignment at sc0000478:15706..22061- (Clytia hemisphaerica)
CTGCATCTCACAAACTTTCAATCAGATCAACTTCGATCAATCAACAAACC
ACGCCGCCCATCATTCCACGTACAAACCCACCCTTATTCTTCCGGCACCC
TCGATTGAAGTTCTTAATTTCTGGCGCAGACGAACGGACAAGTGCACAAT
CACCGAACATTTCCAACAAAGACATCAAAGAGCTGGTATACTAATTTTTA
TTTTCACTATCCAAGTATTGAAGTATTGAAGTAAGAGTGGTACTCCTCTA
TTACAATACCCCTGTCTCACAACCCCGGTGGTGTTTTTCCCACAGAGGGG
ATGAAAATTTCTATCGAAACCGCAATGGGGTTAGTAATTTTGTTTCCATT
TCAAAAAATCCCAGTGGGATTGTTTGGAGTGCAATGTTTTTCCGTTATAT
TTCAAATGGGGACGAAGTTGATCTTTTACCATGCTAAGTTCATTACTTTA
TGATGCCTTATGTTATGACCTGAGATATTCTAAGCTTTGTCTCAAGATAC
CCAAGATATAGATACAAGAACAGTTTTCTTTTTAAAAAGAGCTTTTTGCT
TTTAGTCAGAACTTCTTTTAATATTTAAGTTTTTTATGTCTTTTCAGCTT
TCAGTAACATTCAACATAGATGAAGGAGATGTCCAATTGACACAATTTAA
GTGAGAAACATTCTTACCAGCCTTACAAAAATAAAATACACTTTTTGTTA
CAAGAACAATTAAACAATGAGGCTCAAAATCGTCAAGATATTAGAACAAT
TTAAGAATAAATTTCACCACTCAAATTCGTCAAGATATAATATGTCGATT
ATGCCCAAGAAATAAAAACCTTCACTGATTCTTATATCAAAATACTTTTC
AGGAAAACTTCAATCTTTTCTTAATGCATTTGAAAATTGGATAAAAATAT
TTGGAAATTATTTTTTCAGTAACATCAGTGGATACTTTGACGGAGAAATT
TACTTTAACGCATCCAATGAAAAGACTGAAGACTGGGTCCGACAGAAATT
GAGTGATCTTGATGGAATTCGAATTATTTATGTGCAAGGTATAAACAACT
TGTATTACTTACTGACTTGGGGCTCATTGTAAGATATACTGTAGTGAAAA
CCATTTGGAAAATTTTGTATTTTAGATTTTTTTTAGAAAAATGATTGAGT
GTATTTGTTATTTTGCACGGCTTCTGTAACAAAAACATCCAAACTTTCAT
ATCAAGTTCCTCTAAGGGTTACATTGAAAAATTAGATTTTGATCAAAAAA
GATTTTGAATACCATTACCGTACGTACACGCTAAATATGAGACACACTTT
CCATATCAGACGGCTATCCTAAAATTTCTCAAAAACCCACTACCAAAACC
CCTATTTTCCTACAATCACTTCTTTTGATTCGATGCTCTCTTCTGCTTCA
ACTAAAGTATATTCACGATGAGTGTGCACTCTTTTTTCATTTACCTATAA
CTTTTGAAGGAATTCCTCAATCTTTATAAATTTGGTACCGCTGGAAAGAT
ATTAGTGAGTGGAACAATTTGGAATAAAAAAATCTATAAAAAGATTCTAA
GAATGAAGATGAAAATGAAGAAGAAAAAAATGAAGATCTTGTAGAAAGGT
GCTATAGCTATCAATTTCACTGAAGTGACTCCTTTATTATCGAACGTCAT
CACTGTGAAAAAAATTCTCAAAAATAATCATTCAGTCAAAAGATATCAAA
CAAAGTTATAAGCTGATTGACGTCTAAAAACGCTGTTTTCTGCTGTTTTC
TACTGTTTTTGGGGTCAATCACTTATTAATTTTATATCATAACTTTATAT
TGAATAAATATTTTAGTGAAATTTCTTCACAGTGATGACCTCCTAAGATC
AAAGAATCTCTCCAGTGAAAATGAAAGTTATAGCACTTTTCTACAAGATC
TTCATTTTTTTCTTCTTCATTTTCATCTTCGTTTCTAAAATCTTTTTAAA
GACTTTTTTACTTCAAATTGTTCCACTCACAAATATCTCTACAACGATAC
CAAATATATAAAGAACGAAGAACTCTTTCAAAAGTTATAGCGAAAAGAAA
AAAGAATGCACACTTATCGTGAACAGACTTTAGTTACTAAATTATATGAC
ACTCCTGTGTTAAAGACCCGGTGGACCACTGCCGACTAGAAAATTAGGTC
AAAAGTTTTGTCCCTCTGTGAAAAATACCTGTAATTCCAGCCCTTTTGGA
AAATTGACTTTGATTCCATCCCCATTTGAAGTTTGATGGAAACCGCACTC
CTTTGGTTTCTTTGAGAAGGGAATAAAAGGCGGAACAGTTTATATCCTCA
TTGGGACACCCATGTGTCACAGATCCGCTGGAACCCCAGCCCCACTGGAA
AATTTGGCAAACATTTCGTCCCCGGTGGAAAAGTACCTTGGAATTTGGGT
TATTCACTTTGGTTCCTTCCCCATTCGAAATTCAATGTTTAAAAAATTGC
ACTCCAAAACCATCCCCCTAGGTTTTAATCTTAGAACAATAAAATTTTTA
TCCCCGCTGAGGAAAAAAGTTCCACCAGGGGTGTATTATTGTACATATTT
GCCCTTGCTATTCAGTCTATGTAAAAGTAATGACCTTTGATTTTTCCTTA
TTTGTTCAACAGAGCGATGTTGGACAGGAACTTGTGGTGATTCATTTTAT
AACAAATGCAAACAAGATACTAATCAGCTCAAATGCATGTGAGTTTCTTC
TTTCTTAGATATTTGCCTTAAATTCAATGTCTTTGGGATCTATGGAGGTG
CCATCGGGTAACCTCCGACTACAGTCACATTTTTACCTACTATGTCCAAT
AGCATTCAATGAGTAGCATTGCACTTAACTATATATCATATTATGTTGTT
TTAGCTGTCATACGGCGTTTGTTGGTGAAAGATGTGGTGCTCTTCATATG
GTTGGTAAGAAATTATTGATTCTTTCCCAAATATGTCAGTATCGCTGTTT
GTCAGTAACCCGATTTTTATTGATTCTCTATGGTCTCATGGAATAGAAAA
ATAACTGCCAAACTATTTGCAATCCTTTTAAGCTCAAGAAAGACAGATTC
GCAATGGATTCAAAATTTTATCACAACGACAACCAGAACCTGGATTTTCC
ACTTTACCTCAAGTCTTGGTCAGAACCAGTTATGATTTCTGTATGCTCTC
AGATCAACATAAAAACATTGTCTTTTCATTTTAGACGGAATTACATATGG
TCCTTGGTCAAACTGGACAATGTGTCGATTATGCCAACAAAAGCGAATGA
GATATTGCGTTCCCGCCCCTCTACATGGCGGCAAATGCATTGTGGGAAAG
AATCCACAAATCGAGACGAGGACGTGTTATGATAAATGCTCAAGAGATGA
TGGAGGTAAGCAGAAAACTTAACGGCAAAATAATGTGTAAAATAGAAAGA
CAACACTGTGTCAACATTGATTTTAAAGCCCCGTAGAGGTTCAAGATCAA
GCATCTGAATGGGAAATAAAGGCACTTATTTCTCATCGGAAACGCAAGAT
CCACGTGGTTTCACACAAACACGGATTGTAAGTAAAATCCAACACTAGAA
AAAATATGCTGCGTGAAAACAAAGAAAACAATAGATTCAATCGCCGCCAT
TCCAAAAGCGGCTCAAATCATTAAGAATTCATTTTTCTTGCTCGAGAAAG
GCTGATGATTGCTCTCTAGGCTGTTGAGCTTTAAACTCGATGGTGTTACT
TTTACTTGCTTCAGAGAGGTTGAAGATTGCTTTCTAGCCATTCGGACTTT
AAACTCAACAGTGGAAAACCTTTTTCTTCTAACATTGCAGATGAAGATCA
TGAATTGGTGGCATACGTGTTGGTGATTCTGTTGATCATTGTTCTCCTGT
TGCTCATCATCTTCTGTTGCACATTCAAACACATCGCTGGTGATCGAGAC
AAACAAACGTAAGATGAACCCCGAATCTTTTCAACCCTTTTTCATTTGAT
CCTTCATACTAGCGGGTCAGTGATGCAGATGTGTCAAAAATGTTCTTCTA
ACTTCGGGACAAACAACCGAACCCATTTTTTTTACCCTCTTTCCCTTTCT
TGAACTGCTTTAGTTTGCCCTAGTGTCTTTTTTACAGCAGATTCTCCATA
ACACAAACACACTCGGGGAATTGGAATTTCTTAATTTGTTTGTTACCATA
TGGACCTGTTCGAGTAAAGAAAAACGTTCGATTTATAGAGGATTAACTTA
CTAAATTATACCTTTCAAAAAGGAAGTCGAGTTGCACATTTTCAAGGGGA
TACAGAATCCTTCAGCTGAGACAAAAAACAATGAACTTTTAAAACCTGTT
ATACTAGAGAACATCAAGGCTTTATATTCGTTGTTCTACACAGCCTTTGA
GTAGTAGATTATGAGATATATCTGGTCAGTAAAATACGTGTTCGGCAAGG
CTTTTCCAAGTAAATAAGGATATATCTGGTTACTACGTATCATCTATTGA
CCAATGAAATTGCTAGAAACATCTATTAACCAATGAAATTGCTCGTATCA
TCTATTGACCAATGAAATTGCTCGTAACATCTATTGACCAATGAAATTGC
TCGTATCATCTATTGACCAATGAAATTGCTAAAAACTTAAATGAGGTGGT
TTAATTAGCGCACCACGTTGAATCTAAAAATAGATTTTATTTTTGACATA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAC
GATTCCTTAAATGCAATGACAGAAAATACAATGGAAAAGCTATTAAAATC
GAATCCCTCATGAGCAAATGCCAAATTACAAATGCCAGTCGGTCTAAACG
CAGCCATAATCATTACTCTCGATGTGTTTGTACGAGTTCAAATCCCATCA
ACGTTTGCATTAATCTCTTATTTCCACCTTAATTGCATTATTTGACAAAA
GATATATAACAACTTGCACGTATCTTTAACTAAGCCGCATTGAATTGTGG
GATTGCAACTCGTACAAAATGTCAAAAAAAAGTAAAAAAGTAATAGTTAT
GACGTATGCGTTGCAGAGCGCTATTGAAACTCTTCTTTTCTTTCACAGGC
GAAGAAAAACATCAGCAGATAATGATTCCAGTATAGTATCAGTCACTCCA
ATTCTTGTTCGAAATCCTGGAAAATCGTCACGTGGTCGGACTGGTAAAAA
CAACGATGGAAACTTAACCAATAGATCAATTAGTTTCGCTGGAGAGGATG
AGTACGCAATACCGATGAAAGAATTTGATGTCTCTAGTACGCATGCGCAG
AGTTTGCAACAAAAGAATGGGTTTGATAACCTTGGATATCACAAAGCGAA
TGACGATAGTGATGATTTATATAGAAAGCAGTTGGAAGCCTTTCTCAATG
AAGCTCCAAATCTAACGCGCAATGGAATCACAATGGAAGAAATTGAACTA
CCTGATAAAATCGAAACTCCAATAGACACAGTCAATCATTTAGAACCCGA
ATATGCAGTACCTGAGAGACAAGTTCCAGCTTCCTTTTCTCCAGCACTAC
GCAAACAAGAGGAAATTCAAAGCAAGATTATTGATCGCGGACCTACACCA
CATCAGTTAGCATTGGTTTCTTAACAATTCTGAATGACAGTTATTATGGA
TTGTGAATGGAATTTGGTGGTTCAACGTGTTGCTCACATCTATCGAATAC
TCAAAC

Coding sequence (CDS) from alignment at sc0000478:15706..22061-

>TCONS_00024188 ID=TCONS_00024188|Name=TCONS_00024188|organism=Clytia hemisphaerica|type=CDS|length=10368bp|location=Sequence derived from alignment at sc0000478:15706..22061- (Clytia hemisphaerica)
GCGAAGAAAAACATCAGCAGATAATGATTCCAGTATAGTATCAGTCACTC
CAATTCTTGTTCGAAATCCTGGAAAATCGTCACGTGGTCGGACTGGTAAA
AACAACGATGGAAACTTAACCAATAGATCAATTAGTTTCGCTGGAGAGGA
TGAGTACGCAATACCGATGAAAGAATTTGATGTCTCTAGTACGCATGCGC
AGAGTTTGCAACAAAAGAATGGGTTTGATAACCTTGGATATCACAAAGCG
AATGACGATAGTGATGATTTATATAGAAAGCAGTTGGAAGCCTTTCTCAA
TGAAGCTCCAAATCTAACGCGCAATGGAATCACAATGGAAGAAATTGAAC
TACCTGATAAAATCGAAACTCCAATAGACACAGTCAATCATTTAGAACCC
GAATATGCAGTACCTGAGAGACAAGTTCCAGCTTCCTTTTCTCCAGCACT
ACGCAAACAAGAGGAAATTCAAAGCAAGATTATTGATCGCGGACCTACAC
CACATCAGTTAGCATTGGTTTCTTAAATGAAGATCATGAATTGGTGGCAT
ACGTGTTGGTGATTCTGTTGATCATTGTTCTCCTGTTGCTCATCATCTTC
TGTTGCACATTCAAACACATCGCTGGTGATCGAGACAAACAAACACGGAA
TTACATATGGTCCTTGGTCAAACTGGACAATGTGTCGATTATGCCAACAA
AAGCGAATGAGATATTGCGTTCCCGCCCCTCTACATGGCGGCAAATGCAT
TGTGGGAAAGAATCCACAAATCGAGACGAGGACGTGTTATGATAAATGCT
CAAGAGATGATGGAGCTGTCATACGGCGTTTGTTGGTGAAAGATGTGGTG
CTCTTCATATGGTTGAGCGATGTTGGACAGGAACTTGTGGTGATTCATTT
TATAACAAATGCAAACAAGATACTAATCAGCTCAAATGCATTAACATCAG
TGGATACTTTGACGGAGAAATTTACTTTAACGCATCCAATGAAAAGACTG
AAGACTGGGTCCGACAGAAATTGAGTGATCTTGATGGAATTCGAATTATT
TATGTGCAAGCTTTCAGTAACATTCAACATAGATGAAGGAGATGTCCAAT
TGACACAATTTAAGCATCTCACAAACTTTCAATCAGATCAACTTCGATCA
ATCAACAAACCACGCCGCCCATCATTCCACGTACAAACCCACCCTTATTC
TTCCGGCACCCTCGATTGAAGTTCTTAATTTCTGGCGCAGACGAACGGAC
AAGTGCACAATCACCGAACATTTCCAACAAAGACATCAAAGAGCTGGCGA
AGAAAAACATCAGCAGATAATGATTCCAGTATAGTATCAGTCACTCCAAT
TCTTGTTCGAAATCCTGGAAAATCGTCACGTGGTCGGACTGGTAAAAACA
ACGATGGAAACTTAACCAATAGATCAATTAGTTTCGCTGGAGAGGATGAG
TACGCAATACCGATGAAAGAATTTGATGTCTCTAGTACGCATGCGCAGAG
TTTGCAACAAAAGAATGGGTTTGATAACCTTGGATATCACAAAGCGAATG
ACGATAGTGATGATTTATATAGAAAGCAGTTGGAAGCCTTTCTCAATGAA
GCTCCAAATCTAACGCGCAATGGAATCACAATGGAAGAAATTGAACTACC
TGATAAAATCGAAACTCCAATAGACACAGTCAATCATTTAGAACCCGAAT
ATGCAGTACCTGAGAGACAAGTTCCAGCTTCCTTTTCTCCAGCACTACGC
AAACAAGAGGAAATTCAAAGCAAGATTATTGATCGCGGACCTACACCACA
TCAGTTAGCATTGGTTTCTTAAATGAAGATCATGAATTGGTGGCATACGT
GTTGGTGATTCTGTTGATCATTGTTCTCCTGTTGCTCATCATCTTCTGTT
GCACATTCAAACACATCGCTGGTGATCGAGACAAACAAACACGGAATTAC
ATATGGTCCTTGGTCAAACTGGACAATGTGTCGATTATGCCAACAAAAGC
GAATGAGATATTGCGTTCCCGCCCCTCTACATGGCGGCAAATGCATTGTG
GGAAAGAATCCACAAATCGAGACGAGGACGTGTTATGATAAATGCTCAAG
AGATGATGGAGCTGTCATACGGCGTTTGTTGGTGAAAGATGTGGTGCTCT
TCATATGGTTGAGCGATGTTGGACAGGAACTTGTGGTGATTCATTTTATA
ACAAATGCAAACAAGATACTAATCAGCTCAAATGCATTAACATCAGTGGA
TACTTTGACGGAGAAATTTACTTTAACGCATCCAATGAAAAGACTGAAGA
CTGGGTCCGACAGAAATTGAGTGATCTTGATGGAATTCGAATTATTTATG
TGCAAGCTTTCAGTAACATTCAACATAGATGAAGGAGATGTCCAATTGAC
ACAATTTAAGCATCTCACAAACTTTCAATCAGATCAACTTCGATCAATCA
ACAAACCACGCCGCCCATCATTCCACGTACAAACCCACCCTTATTCTTCC
GGCACCCTCGATTGAAGTTCTTAATTTCTGGCGCAGACGAACGGACAAGT
GCACAATCACCGAACATTTCCAACAAAGACATCAAAGAGCTGGCGAAGAA
AAACATCAGCAGATAATGATTCCAGTATAGTATCAGTCACTCCAATTCTT
GTTCGAAATCCTGGAAAATCGTCACGTGGTCGGACTGGTAAAAACAACGA
TGGAAACTTAACCAATAGATCAATTAGTTTCGCTGGAGAGGATGAGTACG
CAATACCGATGAAAGAATTTGATGTCTCTAGTACGCATGCGCAGAGTTTG
CAACAAAAGAATGGGTTTGATAACCTTGGATATCACAAAGCGAATGACGA
TAGTGATGATTTATATAGAAAGCAGTTGGAAGCCTTTCTCAATGAAGCTC
CAAATCTAACGCGCAATGGAATCACAATGGAAGAAATTGAACTACCTGAT
AAAATCGAAACTCCAATAGACACAGTCAATCATTTAGAACCCGAATATGC
AGTACCTGAGAGACAAGTTCCAGCTTCCTTTTCTCCAGCACTACGCAAAC
AAGAGGAAATTCAAAGCAAGATTATTGATCGCGGACCTACACCACATCAG
TTAGCATTGGTTTCTTAAATGAAGATCATGAATTGGTGGCATACGTGTTG
GTGATTCTGTTGATCATTGTTCTCCTGTTGCTCATCATCTTCTGTTGCAC
ATTCAAACACATCGCTGGTGATCGAGACAAACAAACACGGAATTACATAT
GGTCCTTGGTCAAACTGGACAATGTGTCGATTATGCCAACAAAAGCGAAT
GAGATATTGCGTTCCCGCCCCTCTACATGGCGGCAAATGCATTGTGGGAA
AGAATCCACAAATCGAGACGAGGACGTGTTATGATAAATGCTCAAGAGAT
GATGGAGCTGTCATACGGCGTTTGTTGGTGAAAGATGTGGTGCTCTTCAT
ATGGTTGAGCGATGTTGGACAGGAACTTGTGGTGATTCATTTTATAACAA
ATGCAAACAAGATACTAATCAGCTCAAATGCATTAACATCAGTGGATACT
TTGACGGAGAAATTTACTTTAACGCATCCAATGAAAAGACTGAAGACTGG
GTCCGACAGAAATTGAGTGATCTTGATGGAATTCGAATTATTTATGTGCA
AGCTTTCAGTAACATTCAACATAGATGAAGGAGATGTCCAATTGACACAA
TTTAAGCATCTCACAAACTTTCAATCAGATCAACTTCGATCAATCAACAA
ACCACGCCGCCCATCATTCCACGTACAAACCCACCCTTATTCTTCCGGCA
CCCTCGATTGAAGTTCTTAATTTCTGGCGCAGACGAACGGACAAGTGCAC
AATCACCGAACATTTCCAACAAAGACATCAAAGAGCTGGCGAAGAAAAAC
ATCAGCAGATAATGATTCCAGTATAGTATCAGTCACTCCAATTCTTGTTC
GAAATCCTGGAAAATCGTCACGTGGTCGGACTGGTAAAAACAACGATGGA
AACTTAACCAATAGATCAATTAGTTTCGCTGGAGAGGATGAGTACGCAAT
ACCGATGAAAGAATTTGATGTCTCTAGTACGCATGCGCAGAGTTTGCAAC
AAAAGAATGGGTTTGATAACCTTGGATATCACAAAGCGAATGACGATAGT
GATGATTTATATAGAAAGCAGTTGGAAGCCTTTCTCAATGAAGCTCCAAA
TCTAACGCGCAATGGAATCACAATGGAAGAAATTGAACTACCTGATAAAA
TCGAAACTCCAATAGACACAGTCAATCATTTAGAACCCGAATATGCAGTA
CCTGAGAGACAAGTTCCAGCTTCCTTTTCTCCAGCACTACGCAAACAAGA
GGAAATTCAAAGCAAGATTATTGATCGCGGACCTACACCACATCAGTTAG
CATTGGTTTCTTAAATGAAGATCATGAATTGGTGGCATACGTGTTGGTGA
TTCTGTTGATCATTGTTCTCCTGTTGCTCATCATCTTCTGTTGCACATTC
AAACACATCGCTGGTGATCGAGACAAACAAACACGGAATTACATATGGTC
CTTGGTCAAACTGGACAATGTGTCGATTATGCCAACAAAAGCGAATGAGA
TATTGCGTTCCCGCCCCTCTACATGGCGGCAAATGCATTGTGGGAAAGAA
TCCACAAATCGAGACGAGGACGTGTTATGATAAATGCTCAAGAGATGATG
GAGCTGTCATACGGCGTTTGTTGGTGAAAGATGTGGTGCTCTTCATATGG
TTGAGCGATGTTGGACAGGAACTTGTGGTGATTCATTTTATAACAAATGC
AAACAAGATACTAATCAGCTCAAATGCATTAACATCAGTGGATACTTTGA
CGGAGAAATTTACTTTAACGCATCCAATGAAAAGACTGAAGACTGGGTCC
GACAGAAATTGAGTGATCTTGATGGAATTCGAATTATTTATGTGCAAGCT
TTCAGTAACATTCAACATAGATGAAGGAGATGTCCAATTGACACAATTTA
AGCATCTCACAAACTTTCAATCAGATCAACTTCGATCAATCAACAAACCA
CGCCGCCCATCATTCCACGTACAAACCCACCCTTATTCTTCCGGCACCCT
CGATTGAAGTTCTTAATTTCTGGCGCAGACGAACGGACAAGTGCACAATC
ACCGAACATTTCCAACAAAGACATCAAAGAGCTGGCGAAGAAAAACATCA
GCAGATAATGATTCCAGTATAGTATCAGTCACTCCAATTCTTGTTCGAAA
TCCTGGAAAATCGTCACGTGGTCGGACTGGTAAAAACAACGATGGAAACT
TAACCAATAGATCAATTAGTTTCGCTGGAGAGGATGAGTACGCAATACCG
ATGAAAGAATTTGATGTCTCTAGTACGCATGCGCAGAGTTTGCAACAAAA
GAATGGGTTTGATAACCTTGGATATCACAAAGCGAATGACGATAGTGATG
ATTTATATAGAAAGCAGTTGGAAGCCTTTCTCAATGAAGCTCCAAATCTA
ACGCGCAATGGAATCACAATGGAAGAAATTGAACTACCTGATAAAATCGA
AACTCCAATAGACACAGTCAATCATTTAGAACCCGAATATGCAGTACCTG
AGAGACAAGTTCCAGCTTCCTTTTCTCCAGCACTACGCAAACAAGAGGAA
ATTCAAAGCAAGATTATTGATCGCGGACCTACACCACATCAGTTAGCATT
GGTTTCTTAAATGAAGATCATGAATTGGTGGCATACGTGTTGGTGATTCT
GTTGATCATTGTTCTCCTGTTGCTCATCATCTTCTGTTGCACATTCAAAC
ACATCGCTGGTGATCGAGACAAACAAACACGGAATTACATATGGTCCTTG
GTCAAACTGGACAATGTGTCGATTATGCCAACAAAAGCGAATGAGATATT
GCGTTCCCGCCCCTCTACATGGCGGCAAATGCATTGTGGGAAAGAATCCA
CAAATCGAGACGAGGACGTGTTATGATAAATGCTCAAGAGATGATGGAGC
TGTCATACGGCGTTTGTTGGTGAAAGATGTGGTGCTCTTCATATGGTTGA
GCGATGTTGGACAGGAACTTGTGGTGATTCATTTTATAACAAATGCAAAC
AAGATACTAATCAGCTCAAATGCATTAACATCAGTGGATACTTTGACGGA
GAAATTTACTTTAACGCATCCAATGAAAAGACTGAAGACTGGGTCCGACA
GAAATTGAGTGATCTTGATGGAATTCGAATTATTTATGTGCAAGCTTTCA
GTAACATTCAACATAGATGAAGGAGATGTCCAATTGACACAATTTAAGCA
TCTCACAAACTTTCAATCAGATCAACTTCGATCAATCAACAAACCACGCC
GCCCATCATTCCACGTACAAACCCACCCTTATTCTTCCGGCACCCTCGAT
TGAAGTTCTTAATTTCTGGCGCAGACGAACGGACAAGTGCACAATCACCG
AACATTTCCAACAAAGACATCAAAGAGCTGGCGAAGAAAAACATCAGCAG
ATAATGATTCCAGTATAGTATCAGTCACTCCAATTCTTGTTCGAAATCCT
GGAAAATCGTCACGTGGTCGGACTGGTAAAAACAACGATGGAAACTTAAC
CAATAGATCAATTAGTTTCGCTGGAGAGGATGAGTACGCAATACCGATGA
AAGAATTTGATGTCTCTAGTACGCATGCGCAGAGTTTGCAACAAAAGAAT
GGGTTTGATAACCTTGGATATCACAAAGCGAATGACGATAGTGATGATTT
ATATAGAAAGCAGTTGGAAGCCTTTCTCAATGAAGCTCCAAATCTAACGC
GCAATGGAATCACAATGGAAGAAATTGAACTACCTGATAAAATCGAAACT
CCAATAGACACAGTCAATCATTTAGAACCCGAATATGCAGTACCTGAGAG
ACAAGTTCCAGCTTCCTTTTCTCCAGCACTACGCAAACAAGAGGAAATTC
AAAGCAAGATTATTGATCGCGGACCTACACCACATCAGTTAGCATTGGTT
TCTTAAATGAAGATCATGAATTGGTGGCATACGTGTTGGTGATTCTGTTG
ATCATTGTTCTCCTGTTGCTCATCATCTTCTGTTGCACATTCAAACACAT
CGCTGGTGATCGAGACAAACAAACACGGAATTACATATGGTCCTTGGTCA
AACTGGACAATGTGTCGATTATGCCAACAAAAGCGAATGAGATATTGCGT
TCCCGCCCCTCTACATGGCGGCAAATGCATTGTGGGAAAGAATCCACAAA
TCGAGACGAGGACGTGTTATGATAAATGCTCAAGAGATGATGGAGCTGTC
ATACGGCGTTTGTTGGTGAAAGATGTGGTGCTCTTCATATGGTTGAGCGA
TGTTGGACAGGAACTTGTGGTGATTCATTTTATAACAAATGCAAACAAGA
TACTAATCAGCTCAAATGCATTAACATCAGTGGATACTTTGACGGAGAAA
TTTACTTTAACGCATCCAATGAAAAGACTGAAGACTGGGTCCGACAGAAA
TTGAGTGATCTTGATGGAATTCGAATTATTTATGTGCAAGCTTTCAGTAA
CATTCAACATAGATGAAGGAGATGTCCAATTGACACAATTTAAGCATCTC
ACAAACTTTCAATCAGATCAACTTCGATCAATCAACAAACCACGCCGCCC
ATCATTCCACGTACAAACCCACCCTTATTCTTCCGGCACCCTCGATTGAA
GTTCTTAATTTCTGGCGCAGACGAACGGACAAGTGCACAATCACCGAACA
TTTCCAACAAAGACATCAAAGAGCTGGCGAAGAAAAACATCAGCAGATAA
TGATTCCAGTATAGTATCAGTCACTCCAATTCTTGTTCGAAATCCTGGAA
AATCGTCACGTGGTCGGACTGGTAAAAACAACGATGGAAACTTAACCAAT
AGATCAATTAGTTTCGCTGGAGAGGATGAGTACGCAATACCGATGAAAGA
ATTTGATGTCTCTAGTACGCATGCGCAGAGTTTGCAACAAAAGAATGGGT
TTGATAACCTTGGATATCACAAAGCGAATGACGATAGTGATGATTTATAT
AGAAAGCAGTTGGAAGCCTTTCTCAATGAAGCTCCAAATCTAACGCGCAA
TGGAATCACAATGGAAGAAATTGAACTACCTGATAAAATCGAAACTCCAA
TAGACACAGTCAATCATTTAGAACCCGAATATGCAGTACCTGAGAGACAA
GTTCCAGCTTCCTTTTCTCCAGCACTACGCAAACAAGAGGAAATTCAAAG
CAAGATTATTGATCGCGGACCTACACCACATCAGTTAGCATTGGTTTCTT
AAATGAAGATCATGAATTGGTGGCATACGTGTTGGTGATTCTGTTGATCA
TTGTTCTCCTGTTGCTCATCATCTTCTGTTGCACATTCAAACACATCGCT
GGTGATCGAGACAAACAAACACGGAATTACATATGGTCCTTGGTCAAACT
GGACAATGTGTCGATTATGCCAACAAAAGCGAATGAGATATTGCGTTCCC
GCCCCTCTACATGGCGGCAAATGCATTGTGGGAAAGAATCCACAAATCGA
GACGAGGACGTGTTATGATAAATGCTCAAGAGATGATGGAGCTGTCATAC
GGCGTTTGTTGGTGAAAGATGTGGTGCTCTTCATATGGTTGAGCGATGTT
GGACAGGAACTTGTGGTGATTCATTTTATAACAAATGCAAACAAGATACT
AATCAGCTCAAATGCATTAACATCAGTGGATACTTTGACGGAGAAATTTA
CTTTAACGCATCCAATGAAAAGACTGAAGACTGGGTCCGACAGAAATTGA
GTGATCTTGATGGAATTCGAATTATTTATGTGCAAGCTTTCAGTAACATT
CAACATAGATGAAGGAGATGTCCAATTGACACAATTTAAGCATCTCACAA
ACTTTCAATCAGATCAACTTCGATCAATCAACAAACCACGCCGCCCATCA
TTCCACGTACAAACCCACCCTTATTCTTCCGGCACCCTCGATTGAAGTTC
TTAATTTCTGGCGCAGACGAACGGACAAGTGCACAATCACCGAACATTTC
CAACAAAGACATCAAAGAGCTGGCGAAGAAAAACATCAGCAGATAATGAT
TCCAGTATAGTATCAGTCACTCCAATTCTTGTTCGAAATCCTGGAAAATC
GTCACGTGGTCGGACTGGTAAAAACAACGATGGAAACTTAACCAATAGAT
CAATTAGTTTCGCTGGAGAGGATGAGTACGCAATACCGATGAAAGAATTT
GATGTCTCTAGTACGCATGCGCAGAGTTTGCAACAAAAGAATGGGTTTGA
TAACCTTGGATATCACAAAGCGAATGACGATAGTGATGATTTATATAGAA
AGCAGTTGGAAGCCTTTCTCAATGAAGCTCCAAATCTAACGCGCAATGGA
ATCACAATGGAAGAAATTGAACTACCTGATAAAATCGAAACTCCAATAGA
CACAGTCAATCATTTAGAACCCGAATATGCAGTACCTGAGAGACAAGTTC
CAGCTTCCTTTTCTCCAGCACTACGCAAACAAGAGGAAATTCAAAGCAAG
ATTATTGATCGCGGACCTACACCACATCAGTTAGCATTGGTTTCTTAAAT
GAAGATCATGAATTGGTGGCATACGTGTTGGTGATTCTGTTGATCATTGT
TCTCCTGTTGCTCATCATCTTCTGTTGCACATTCAAACACATCGCTGGTG
ATCGAGACAAACAAACACGGAATTACATATGGTCCTTGGTCAAACTGGAC
AATGTGTCGATTATGCCAACAAAAGCGAATGAGATATTGCGTTCCCGCCC
CTCTACATGGCGGCAAATGCATTGTGGGAAAGAATCCACAAATCGAGACG
AGGACGTGTTATGATAAATGCTCAAGAGATGATGGAGCTGTCATACGGCG
TTTGTTGGTGAAAGATGTGGTGCTCTTCATATGGTTGAGCGATGTTGGAC
AGGAACTTGTGGTGATTCATTTTATAACAAATGCAAACAAGATACTAATC
AGCTCAAATGCATTAACATCAGTGGATACTTTGACGGAGAAATTTACTTT
AACGCATCCAATGAAAAGACTGAAGACTGGGTCCGACAGAAATTGAGTGA
TCTTGATGGAATTCGAATTATTTATGTGCAAGCTTTCAGTAACATTCAAC
ATAGATGAAGGAGATGTCCAATTGACACAATTTAAGCATCTCACAAACTT
TCAATCAGATCAACTTCGATCAATCAACAAACCACGCCGCCCATCATTCC
ACGTACAAACCCACCCTTATTCTTCCGGCACCCTCGATTGAAGTTCTTAA
TTTCTGGCGCAGACGAACGGACAAGTGCACAATCACCGAACATTTCCAAC
AAAGACATCAAAGAGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013575XLOC_013575Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024188-exon-sc0000478-1575043694:21877..22061TCONS_00024188-exon-sc0000478-1575043694:21877..22061Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1575043694:21412..21464TCONS_00024188-exon-sc0000478-1575043694:21412..21464Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1575043694:21024..21142TCONS_00024188-exon-sc0000478-1575043694:21024..21142Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1575043694:19374..19449TCONS_00024188-exon-sc0000478-1575043694:19374..19449Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1575043694:19158..19207TCONS_00024188-exon-sc0000478-1575043694:19158..19207Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1575043694:18707..18877TCONS_00024188-exon-sc0000478-1575043694:18707..18877Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1575043694:18154..18271TCONS_00024188-exon-sc0000478-1575043694:18154..18271Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1575043694:15706..16313TCONS_00024188-exon-sc0000478-1575043694:15706..16313Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1510915933:21877..22061TCONS_00024188-exon-sc0000478-1510915933:21877..22061Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1510915933:21412..21464TCONS_00024188-exon-sc0000478-1510915933:21412..21464Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1510915933:21024..21142TCONS_00024188-exon-sc0000478-1510915933:21024..21142Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1510915933:19374..19449TCONS_00024188-exon-sc0000478-1510915933:19374..19449Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1510915933:19158..19207TCONS_00024188-exon-sc0000478-1510915933:19158..19207Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1510915933:18707..18877TCONS_00024188-exon-sc0000478-1510915933:18707..18877Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1510915933:18154..18271TCONS_00024188-exon-sc0000478-1510915933:18154..18271Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1510915933:15706..16313TCONS_00024188-exon-sc0000478-1510915933:15706..16313Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1491911889:21877..22061TCONS_00024188-exon-sc0000478-1491911889:21877..22061Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1491911889:21412..21464TCONS_00024188-exon-sc0000478-1491911889:21412..21464Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1491911889:21024..21142TCONS_00024188-exon-sc0000478-1491911889:21024..21142Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1491911889:19374..19449TCONS_00024188-exon-sc0000478-1491911889:19374..19449Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1491911889:19158..19207TCONS_00024188-exon-sc0000478-1491911889:19158..19207Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1491911889:18707..18877TCONS_00024188-exon-sc0000478-1491911889:18707..18877Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1491911889:18154..18271TCONS_00024188-exon-sc0000478-1491911889:18154..18271Clytia hemisphaericaexon
TCONS_00024188-exon-sc0000478-1491911889:15706..16313TCONS_00024188-exon-sc0000478-1491911889:15706..16313Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024188-proteinTCONS_00024188-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000478supercontigsc0000478:15706..22061 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0295443	0.0686075	0.0335609	0.204286	0.129143	0.311612	0.401125	1.40419	0.569229	1.16641	0.585151	3.22393	2.99235	2.18486	2.51085	1.34189	1.56188	0.128825	0.0337016	0.849492	0.600097	0.66002	1.51593	0.715627	1.04511	1.95253	0.66504	0.0672545	0.0342609
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024188 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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