TCONS_00024048 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024048
Unique NameTCONS_00024048
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2685

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024048 ID=TCONS_00024048|Name=TCONS_00024048|organism=Clytia hemisphaerica|type=transcript|length=2685bp
atttattttcaagatttgatAAATGATAAGTCTTCCACGCTAGTATATAG
TGTAAACATAAAATTGTTCATAAAAGTATTTGAGGTGAGGAAAAACTTTT
GAGAGgcaaaaacaagtgaaaaaaaacttgagataaagtgaagaaattga
agatgaaTCCAATAACAGCTCTGGCAAACATCTTATTGGTGATATTGATT
GCTTCGACATCCTCATTTGCAAGTCCACCAACACCACAAACACCATATCG
ACAAAGAATCGAACAGATAGCCTCAGCTTCTGGCGATGGCAGCCCCGGGT
CACAATCGCCAGATTGGTACCCACAAAATTACACAGTAAACCGTTATAAA
AATGGTGATCTAGTCTCTGGTAATTTCTCAAATGGTTGCCATGGGATATT
CGCGTATGATAATGATACTAATTGTATTTGTAAGAATGAGACTACGTTTT
ATTGGAGGGATGGAGCTAATTGGTGGACGGAGATGTCGTGCTGGCTGACC
ACCCCGACAGATTTCCAAGTCCGATTGAAGGGTTCAATACGCGGTGTTGG
TTTCATTAAACAAATGGGTGCTGCGTGGCAAATAGATGGAAATTCAATGA
TAGAAGCTAAAAGATTATCTGGTTTAAATCTTTCGAATTGCCAAACACTA
ACTGTGGAGACAGATTCTTTGGTATATATGGGCTACAATGGATGGAATAA
TTACTATAATTCATCCAGCATGTTTGAAGTAACTCAACATGGAACTGGTC
ATTTTAAACTAAAGATCAACTCCAAGGATCATACATTAGCGGGTCACTTG
GTGCAATTATCATTTACTtgtttcaagaatttttcatcTGGTGAATTATT
CTCCACTGTACTGAAGTTTGAAGGACAAATGTCGTACCGAAACCTCTCAT
CAGTCCCACCTCCCACAATGCCACCGACACAACCAACCCCTATTGGCAAG
NTTGATTTTTAGTCTCATCAACGCCACCTCCCACAATGCCACCGACACAA
CCAACCCCTATTGGCAAGTCAACACCCCGTGATGCGGAGAGCGAAGGGGT
CGAAGATACGAACGAAGCGTTGGTTATTGGAATCGTTGTTGCTGTGGTTG
TCATCTTTGTACTTCTCGTTCTCTTGGTTGTTTTGTGGAGAagACGAGGA
AAACAAAATTCTCCCACTAATACTAAGCAGAATGAAACAGAGTTTTATCA
AGCACCATCGTACAATTACCCAGACAACAAACCTAACCCATTTAGTGGCT
CAACAAAGGCCTTGTTCAATCAAACTAATCACCCTGGTAACCTACATATA
AACAACAACGGTGGAAATAGCCCAGCGCCGCCCGTTCCTCGATCGCCAAG
ACCAAATAGCCGCCCAGTCTCAGCTGCATACAATAACGGTTATATAGATA
TGGCGAATGATAACCCACAACAATATACAGCCTTAAATTCAAACACAAGG
GTCGATCAGCAGTATCAGCCTATTAATTCACCAAAAGACAAAATACCAAC
CTTGTCAGAACAGGATGAATATCTAGATTTAACAGACCCTAAAAATAATA
AGCAGCAGACTACACCAGGAGAGATATATACAGATCTAGACTATCAACCA
GGAAATATATACGAAGGGGTTGCTCAACCTGGTCATAAAAATAATCCTCG
AAATTACAATGGGTCTAATAATCCTTCAAAAACATCAGAGACATATGCGG
ATTTACAGGGAGCTCAAAGGACTCCAGAGACGTACCAAGACTTAAATACC
GCGCGGCCGCCTGTCAACGAGACTTATGAGGATATAAAAAACGGGACAGA
TTATGATAATCCAACCGAATCTAAGTGATTTAGTGGACAATATCTTGAAC
TCAATGGTTGAGTTTACTCTAGTTTACTTCCAAAAGAAGATCGTAAGTGG
CCTATATGGTAAACTATCACCTACTgtgaaacacccccttctcacaaacc
agTGGAAGGGgttcccaccgggtctgtgagaaggaggtgtctCTAAGAAC
CGACGTATTTCTTCAAGTAAACTATTTAGGGGTATTTAATGATGTGGTTT
AAAAAGCAATGTTAGAGCAATTGAAGATTCTGTTCAAACTGATATGACAC
ATTAATTTTAGTTGagaattttacatatttttatatattaATCTTAAATT
ATACATAAATTATTGCAATAACAGCTTTAAAGACAATTCGAATTCAAAAA
TTACTCAAAGCTACCCAAAGCAACATTTGTAAAAACGTTTGTTTTGAATC
ATCGGGGGCTTTCTAGAGTTTGATTTTTATATCATAAATATAATAACTGA
ATAGTATGTTTATAATCCGATGTAATGACGATGTAATGtattatacggaa
gcacccgaaatAGCCTGGGCGTTTgaaggcttctgctcatcctctagtga
aaaagtttcttatagaagagaggaagtatatctatagaggtctgcgattc
agaatAGGGCGTTTGACATTTGTTTCATTGCTCCAAATTCAAAGTTAGTG
GCAAAAAAACTGGTCTATTTtcggtgcttccgtataaaacgttacgtcac
aaatatcaaaaatataacGTCATCATTAATGAGTGGCTTCCATACAATTG
AAAGCATTGAGAGAACATGTGTATCGCAACATAGGGATGAATGATGGCAT
TGCTCTTTCGCAACGCAACGCATCATGCACACACT
Run BLAST on NCBI

transcript from alignment at sc0000471:130077..147170+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024048 ID=TCONS_00024048|Name=TCONS_00024048|organism=Clytia hemisphaerica|type=transcript|length=17094bp|location=Sequence derived from alignment at sc0000471:130077..147170+ (Clytia hemisphaerica)
atttattttcaagatttgatAAATGATAAGTCTTCCACGCTAGTATATAG
TGTAAACATAAAATTGTTCATAAAAGTATTTGAGGTGAGGAAAAACTTTT
GAGAGgcaaaaacaagtgaaaaaaaacttgagataaagtgaagaaattga
agatgaaTCCAATAACAGCTCTGGCAAACATCTTATTGGTGATATTGATT
GCTTCGACATCCTCATTTGCAAGTCCACCAACACCACAAACACCATATCG
ACAAAGAATCGAACAGATAGCCTCAGCTTCTGGCGATGGCAGCCCCGGGT
CACAATCGCCAGATTGGTACCCACAAAATTACACAGTAAACCGTTATAAA
AATGGTGATCTAGTCTCTGGTAATTTCTCAAATGGTTGCCATGGGATATT
CGCGTATGATAATGATACTAATTGTATTTGTAAGAATGAGACTACGTTTT
ATTGGAGGGATGGAGCTAATTGGTGGACGGAGATGTCGTGCTGGCTGACC
ACCCCGACAGGTATGTCACTGGCACATCTTTCTATAACTATAAGAACTTT
AGAGCCAAAATTTAAAACCCTTTTAAGAACCATTCTAAGGACTTCcggat
ttaaaaaattgcaatttcttAATGAATTAGCAAACCTTATAACGTATATC
ACTAAGCTATAATGCACCAATATGTCGACCACTGAATATCTTAATATACA
AATCACCCCTGCCACAATGGCGTAGTGAAAACCTATTATCCGCAATGAGG
AGCAAATAGCTAGTATATTTTGTTTCGTATAATTGAGCActttaaatttt
attgtttatccAGCACGGATTTTCAATTAACCTTCGTTTTTCATGAGCCT
ATACCCAGCAGGCACAtaacgttattttaacgtttatctaacgctcacaa
cgtccatataacgttatattaaccgcgtttaaacaacgttgtgtgccaac
ctATAGCGTATTTCAAAATCTTCTAGCTAGGTTCCAGGGTCCTTTTCTCA
GTGGGTGCGATTTCTTTAACAACTTTTCCAGTGGGTAGGGCGTCCTACCT
GGTCTGTGCTACTGTGGTGCAGCAGAGGCTCATAGAGATACTGCCTAAAG
GTTTTTGATATTTATAACATTCAATGATGACTGacctttgataaaaaaag
tgaagactagaaatttaattttgttcattatttgacgtttcggtgtcttc
tttgcaccatgatcacaagtatagtaaaaaaaacaattcaaaacgAATTT
CAATTTGCAATGACTGATCTTGTCAAATAGCTTGCTCGTGGGCGTGTTGA
AGGCCTTCAAATTAAAGGTTGAATTTTTATTATTCAGGCAATGTGTTACA
TCCAATATATGTTAACGTTTCTTAGATTTCCAAGTCCGATTGAAGGGTTC
AATACGCGGTGTTGGTTTCATTAAACAAATGGGTGCTGCGTGGCAAATAG
ATGGAAATTCAATGATAGAAGCTAAAAGATTATCTGGTTTAAATCTTTCG
AATTGCCAAACACTAACTGTGGAGACAGATTCTTTGGTATATATGGGCTA
CAATGGATGGAATAATTACTATAATTCATCCAGCATGTTTGAAGTAACTC
AACATGGAACTGGTCATTTTAAACTAAAGGTATGtatcacccctgtatca
gtgtaATACCATATACACACCTGTATCAAGTTCATATGATACCTTTATCA
GTACACTGTGTTTAATACGCCTATGTTTTTGTCCCGCCtaatacatccct
gtctctCTCCTCTGTGGTAAACAGTCTTTTTATCACTTTATCAGTACCCT
GTGTTATACACCCATATTTTAGCGCCCCACCTAATACATCCCTGTATCAC
CACCACTCCGTAAAACACTCCTGTATCGTCGTCCAGCCTTTTGAGCTCCG
TTTTATAACGTTTTTAGAGTGGCCTGTCACATACACACTGTATTGGTGCT
CTTTCTTTTACATTCCTTCGTCAGAGCACCCTTGAATCAGTGTTAAGTCT
TTTTACACCTCTGTATATTTATGGATTTCTTCTTCACTGCCCATACATAA
CCTTGTATCCTACCTTATACATCCCTGTATCAGTATCCTGCTTTAaaacc
cctgtatcagtgaggGGTCGTCAGAAAAAAACctgaattattattattaa
gatGTTATATCAAAGTGTAATCTTAAatggacataacagtacttgcgaaa
tttgtactGTAtacagcggatacaaaatcaaaacaaatgtcacatgtcga
aataaaaaatcaaaccaaatatggctaattttgattgttcaattgtttta
caagtttgttttggacacgtgattttaattgttctctttaatgacacgtg
gttcgtgcaatgtttacattttactacttttatgtcccttttgCTACCAT
AGCTCATTACACTGAATTTAAGTTACTCAGTTTAACTTTGGTACCTCCTT
GAAAAGAAAGCTTAATCAGTACTTACTTGACACATCAGAAAAATTATCGA
GCTCAGTTGTGAAAactgttcaatctattcataatttttaaagtgACCTT
CTATATTTGACTTTTTCATTGTCTCATAAATTAGTACCTCATTGAGTTTC
TATTAAAACATTTCCAAAACTTCTTTCGTGATTTTTATTTACGAGTCCAT
GGGGGGTTTTGTCTCAATAAACAAACACAGAGATTTTTCAGTTATTATCG
CGTCTTTTGGTGATGAAAGTATGGTTTGGCGAAAGTTGGATTCTCGGATG
GATTAAAATAGACGATATcagctttccgaattctccccgaatgatttccc
atgatgcattgcacaaaaaaattcacggaaagtcaatatcgtctgtgaat
ttttttgcgcaatgcatcacgggtaatcattcggggagaattcggaaagc
cacTATCGTCTATTGAAAGCTCTTCTCTATGTGACTGATTATTCTAGAAA
TTTGATCACTTTGTTGAAAACTTCATTACCTTAGCTTGATAAATCATCTA
CCATCAATTGTAATTTCATAAAGCTCTAAAGTGTACTCCCAGCTAAATTT
ACGACTTTTTGAGGAGTTTAATGCCTATAATATTTTTAATATGCATGTGC
CGTCGGGTTGGATGTGGTGGTGTGTATATCTCTTGGTCGTGGAACGTGCA
TATCATTCCCGTGGCCACAGACCTGTTATCCAATCAAACTGGATAATCTC
CGTCCCCGGTTGATAAAATACCCTGCAGTAACTTTTGACACACAGGGAAA
ATACCCTATGATTTTGTCCCGTTTGGAGACCgaattgaaataattttacc
CCTACCAGTGGAAGAAAATAATAGATACGTCAGTCTAATTTTTCATTCTC
ACTGAGGGAACTACTTAGCTCAACttgggcactgagacagggatgtaatg
tAAATTCGATATTATATGGACGTAATAGATGTAAGATCGGtgttttttta
catgaatttttttatctgtctaGATCAACTCCAAGGATCATACATTAGCG
GGTCACTTGGTGCAATTATCATTTACTtgtttcaagaatttttcatcTGG
TGAATTATTCTCCACTGTACTGAAGTTTGAAGGACAAATGTCGTACCGAA
ACCGTAAGTGTAAACTCAATCTTGTACCAAAAGCCACGTGCACCGACTTT
TGATTTTactaatttgaaaaacttttcttgAGCATTATTGGAAAGTGAAC
TAAGGACTGGGCTTAAGTTTGTCGTaaactgtacacgttttttatataag
aactaGCAGATTTTGGCTAAGACTTGACTGTCCTTAAGTGTTCTAATGCG
TACACGTTTTATTATGAGAACGtttagatttttgaagcctttggatgttc
ttaacatgttcttattttcagcattttgtgagtgtttttgtCCAATTTCA
TAAGAGAATAGGGAAATTTCTGGGATTTTCTTGACTCAAAGGCTCACTCT
CTTTTAAAATTGGTTTAGAATTTTATTGTCGTCACTTCATTTCTTgaatc
tttaaaaagattattgCTCTATTATTATTACTTTCCATAACTTGTGCTTC
TGAATGTACTCTTCAGAAAAAGCTCAAGTTAAGACTCGATTAATTCGCAT
TCTTTGATCTTGCTGAAAAATGTTGACTTTTTTCCAAGGCAAAAAAGCAT
CCTTCACCAATATTTTCCTAAATTTGTTCAAAGGGCCAGGGTACATAACT
GTCACCTGTCCCCTCCTCTTAGTGGTGTATAATTCTTTGCTGAAATGGTT
TCCACAAGAAAGATTACACACTTAATCAGTCAGgtactattgcaaactag
gagaaatgcgtgtatttcgcttaaataggatgatttatcctaaataagat
aaaatcgatagcttagttaggagaaatagNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCTTAGTAAAAACTTTGCTC
GTAACGatgttttgaagaaatagaaactTAGATATAAATAAACTTATCCT
ATTGTAGTAGACACATTTGCGCAATTTACGTTTTTGTGGTTTGTGTCAAG
GAGAATGAACACTTTCTCGTCCTTCGACACTTTTAATTcacgctcatatt
tttcatacgGCAAAGCGTGTAACAAAAGCATTATTTCTCctaatttgtat
attttatccaaaataagataaatgttttatattttttcactccGCGCTGA
TAAGAAGCTAACATTTGGCCTAACATGATCTTCTTTATGAGTATAATTGA
TTTAGAGAGTTAAAAAGACGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttctccta
actaagctatcgattttatcttatttaggataattcatcctatttaagcg
aaatacccgcatttctcctaatttgcaatagtactcGACTGTTAATGGAC
TTTACAGTAGCttttagactagcaaactagtctgttaattaattaattaa
ttatgtTGTTGAGAGGGCGGGAACAAAAAGGTGGTGGGCATTTACTgaaa
taggagctgcgtaggagaacgagaaaaggttggtgagaggctgctgatta
actgctttcagcccttgccaccgacaaaatttcttcttacgcttacctaa
ctcctacgctcacttttcccgcgtgataccgttccaccCCCACTGGTGTG
ACAGTCTAAATAGCTTTTAAAATTCATATTCCTTCGTATATCTTTTATCG
GTATCGGTAAAGGATTCATTTATTAGAGATGATTAGATTATGAACCCTGA
TATTATATAAACTTTTATTTCATAAACTTTAATTCAAAGTCACTTCTTTC
TTTTGTCAAGATTTTGTCAAAGATATATAGACCACAAAGCAGTTATTTTC
AATGCGAATAAGTACAGTTTCATACCCTGCGAAAAAAACTGCAAGGTTTT
TTTATGCAATACAGTTGATATcctctaattttttttaagggaaattagat
tttcatcaaataaggaaaagatttttttcgaatagtggagcgtcgtttat
gagagtttcttgttgaagGCAATTTTCAATAACATCAAATAaatgctcca
ttattcgatgataTTGAAAATTACTGCAGTTGAATAgtggggatgagctg
gagtttttacaagatgcttaactgattggttatttttaaacaatagggat
gatgggttctttagaagaagtaataaaatcgtttgtctcgACATTTAACt
accaacagagtcatcaaagaacttgtaaaaactccagcttgatagcgtca
actgtagttgtTGATCATCAAGCAAATCTGTCTGCTtctcaaaattgaaa
ttgtttgaatgtttgatttttaGTCTCATCAGTCCCACCTCCCACAATGC
CACCGACACAACCAACCCCTATTGGCAAGNTTGATTTTTAGTCTCATCAA
CGCCACCTCCCACAATGCCACCGACACAACCAACCCCTATTGGCAAGGTA
GGTTTctttaaggttttgtttttaaataagatagTAGGGGGTCAAGTCTC
AGGTCCCGTGGCAACTTTTATAGGACTAAACGCAACCTGTTTCATTTCAA
AGTCGAATTTTTTGAGAAGAGTCAAATTTAAGGCCCGGGAAATCTtttgt
gaccaaaatagtgacgccataggcaaaactccaagggaaaataaggggta
gagaaatagctgattttcaaaaatttgactcttctcaaaaaaatctaatt
atTATATATTAAACTTTGAAATGGAACAGGTTTCGTTTAGTCCTATAGAA
GTTGCCACGGGATCTGAGACTTGGACCCCTACTAGGCCTactaagagtga
tatcgtttgcttactcatcacttttaattaacaagctttttcacattgga
ttgacacggatgtggagcaagattggtcagagagaggaaaagaaaaacat
tttttgcttttatcagcacaatataacaataagaagacactgtcctgata
tgaaatatatgtctgatatgaaacactTATGGTAAATTAAAACccccggg
ggggcactgggtttgcggactgacggtatgtgcgggccaaaaattggctt
ttaaaattgcacctttacagtgcagcaaaaatcagtgaaaatcataccct
tagagtgcattttcccccaaattttcgatccctttcgtgcaaaaaatggt
caaaattctagcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagaggaaaaga
aaaacattttttgcttttatcagcacaatataacaataagaagacactgt
cctgatatgaaatatatgtctgatatgaaacacttatgtaaaattaAAAC
CTcacaaaaagtcacaaaaattcATTAGTATTATttagtacacccctgtc
tcagtgccccggtggaaccttatCTCACATTTGGGATGAAAATTGTGATC
GAAATCCCAATAGAGATAAAAAATATCTATTGTTTCGATCCTAAAGAAAa
ctagtggggatggttttgtgttttaatttttttctatcaaatttcaattt
tggatgATATCAAATGGAGATGAAATTTTAGGGAATATTTTTCACCGGGG
ATGTTATTTGGCCAAATTTTACAGTGATTCCGTGATTCAGTACTTTACTA
AAAACGGGTGAAAGATTAGTCATTAATTATTTACCGAATTTTGCTGAAGA
GAATGCTTGATACAtctatcccagctggcacaaaacgttgtttcaacgtc
catctaatgttcataacgtctatataacgttagatgaacgttgaaacata
tactcactaaaatttcaaaatctttattttctacaaaaattaaatatctA
CTGCTGCTGTAAATTGtaactatttttctttatttttgcgCTAGTCAACA
CCCCGTGATGCGGAGAGCGAAGGGGTCGAAGATACGAACGAAGCGTTGGT
TATTGGAATCGTTGTTGCTGTGGTTGTCATCTTTGTACTTCTCGTTCTCT
TGGTTGTTTTGTGGAGAaggtaattcatgatatgcaccactgcaatgact
tcacaaaTTATGCATCTGTGTTCTTTTTCCACccaatacactttttctat
tgtttaagtgacgtaatGGGAGGTGTTTTATGAGACCAATCCTACCTTCG
AAAAATCTACAAACcaatatattttattatttacaGACGAGGAAAACAAA
ATTCTCCCACTAATACTAAGCAGGTAAAAATTATCcatgatatttttttg
tttatttgggCACACTCACTCATTCTCTCGCTCTTTACTCGTTTGATTAT
TTTGGTTCACTCGTTTTCTCATACAAGAATACCCGGCAGCCATAAACcat
gtacacgtttttataagaacatgtaagagctatataagagcataaggctt
tgatgaccaaaatattaagaacaagttaagaacattttaagaattcGTGA
ACTCTAGAATACcaaatttcaaaggaaaaaaatggacaaaaatactcata
acACGgtgaaaatattaagaacatttttaggcttaaaactcaaaaagtta
caCTGCATGAAATATATGTCTTTCCAGTTTCTTGTCCTTGAAAACTTAAT
GTTTTCGAACGTACGATTgcggaaatatcgatttttccttACAGTTTTAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTAcagttttaagaaaagattctttttctttaa
gttcttgaaaaaagataatctttaaatatttcttgcttcgaaaaggtgga
taatttcttttgtcgtttttaattaaaaaggaaatctttcatgtttccag
attgactatcttttcttcgtttgtatttcaataaaatataaagttttcgt
cttgaaatttaaacgaaaatatttttcatgaaaatatcaaattttcatgc
caaatttatcgaaaatacaatcaccaaatacaataaaaaaaggtaataat
ttcgttttttaagaacattataatctCTACGTCGGGATAAAAGTAAAGAG
CAGATTTTCTTGCAGCTGAtttggcaaaagtaaaataaatatttcaattt
tatgggaGCAAGATGAGAATGTGTTTTTTAGGATTGATCTCTTGATTgac
aatattattttttaattaaaaacttttatattGTCCAATGACCCCTGTGC
CTGTTAGTGTGATGACAGGGAAAAGAAGAGGTGTCCTCTATTGACCAAAC
TAGGTGCCGCTTTTCTTTTTCGCACCTTAGAATTAGAAGTTTTAAGGCGA
AAGGAGAAAGAAATGTCCTACATCTTTTACTTTGTTTCGTCTCCGCTTAG
AAATTGCACTGtataaactttcatccccatagtGGGAGAAGCTCCACTGG
GGCTGTAACACtgtgacaggggtgtaattagcTCTCTTTGTACTCTatga
tttacagatttttcaaattctagatttttcttttaaatatttaattttga
caattAAGTCAGATCAACAACTGTTGAAAGTGCAAACCACACTTCGCGCA
ACCTCAGCATTATTTGCATTATTTGCAggccaattttgtaaaatttgtat
cactacttttaaagaaactcaatacatccctgtctcacagcccctgtGGA
AGTTTTTCCCACATGGAACCacaacccactggaaaatttagcaaaaactt
CATCCTCTGATGAAAAATACCCTAttatttcagccccactgggaaataga
ctttgaattcatccctatataaaaattatatttaagaaattgcgttcaaa
accatcccactatatttttgaactcaaaaagtatataaattcTATACTGC
ATGAAATATATGTCTTTCCAGTTTCTTGTCCTTGAAAACTTAATGTTTTC
GAACGTACGATTgcggaaatatcgatttttccttacagttttaagaaaag
attttttttctttaagttcttgaaaaaagataatctttaaatatttcttg
cttcgaaaaggtggataatttcttttgtcgttttcattaaaaaggaaatc
tttcatgtttccagattgactatcttttctttgtttgtatttcaagaaaa
tataaagttttcgtcttgaaatttaaacgaaaatatttttcatgaaaata
tcaaactttcatgccaaatttatcgaaaatacaatcattaaatacaataa
aaaaggtaataatttcgttttttaagaacattataatctCTACGTCGGGA
TAAAAGTAAGGAGCAGATTTTCATGCAGCTGAtttggcaaaagtaaaata
aatatttcaattttatgggaGCAAGATGAGAATGTGTTTTTTAGGATTGA
TCTTTTGATTgacaagattattttttaattaaaaaattttatattgtcCA
ATGACCCCTGTGCCTTTTAGCGTGATGACAGGAAAAAGAAGAGGTGTCCT
CTGTTGACCAAACTAGGTGCCGCTTTTCTTTTTCGCACCTTAGAATTAGA
AGTTTTAAGGCGAAAGGAGAAAGAAATGTCCGACATCTTTTACTTTGTTT
CGTCTCCGCTTAGAAATTGCACTGtataaactttcatccccatagtGGGA
GAAGCTCCACAGGGGCTGTAACACtgtgacaggggtgtaattagcTCTCT
TTGTACTCTatgatttacagatttttcaaattctagatttttcttttaaa
ttattAATTTTGACAATTAAGTCAGATCAACAACTGTTGAAAGTGCAAAC
CACACTTCGCGCAACCTTAGCATTATTTGCATTATTTGCAggccaatttt
gtaaaatttgtatcactacttttaaagaaactcaatacatccctgtctca
cagcccctgtGGAACGTTTTCCCACATGGAACCacaacccactggaaaat
ttagcaaaaacttCATCCTCTGAtgaaaaataccctatcatttcagcccc
actgggaaattgattttgaattcatccccatataaaaattatatttaaga
aattgcgttcaaaaccatcccactatatttttgaactcaaaaagtatata
aattcTATCTATCTGTCGTCACATGAATAAGTTTATGTTCAAACATTATA
AAACAAAAGACTGGACATAGCTGCTCACATGGgaattataattttatttt
ttctaattattcattaatttttacGACTTGTCGATTCTATCAGTGTTtga
actttgaattttttcaattagATCAAACTTGTATCAtatgtagctgatga
ttgtaagcatgaaactttaagttctacattttaaaaaaagttttgactcA
TCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTCAAtctactaaaaaagctttacaaatcctCCCCTTCTTGGCTT
TGAAGCATTGTGCTTTAGCATCTTCACCAGATTTTCTACAACTAGACTAA
TTGGAGATGTTCAGAAACGATTTTAGTTTTAAGGGCTGGAAACTGGATAT
GCTCAAATTaatcttcttcaaattcatTATACATGACTTAAAGCTTTCAT
TTCAAtccattttgagattatttttaaaattttgtgtttttgtaaaactt
gcaaaacttttcaaaatctttcaaagatcTTTTATTTAAGTCTTAATCTC
GATTTACTTCATTATAGTTGACAAATGTAATGCGAGGCAATTTTAACTCC
TTATATATTTGAATCAAATGCAAGGGTGTTTTGTAGAAGGAAACAATTTA
TTTGAggcattctttcataaaatgaaaatagtataATCCTTCGACAGCTA
CCTTTGTTtcgtttgagttttttgaatGTATAGCGATTCACNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGCGTTTGTGACGCTTTGCT
TACGGCTAGTAGGTTGCATTTAAGCCTGTATTTTACATTATAGATGgcat
aaaatttttggatgtattAGATATTTTGGAAATCAGCCAAAATTAATTTG
TATGGTCAGTGAGTTTGACGAGTTTTACATACAGAACGAATCAGGaatgt
atataaaaagaaacaatttgattttgatatttcatgaatacacgtttttt
tataagaacatccaaaatttttgccttCGGAAATAAGCCTAAAAAGTGTG
CTTAACATGTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgctcttatata
gtttgtttttataaaaaaacgtgtagtattaAGCTTTTGCGTTAACTAAT
TCTCGTAAAATTGGGGCAGTGGTGTGTACGAANAATTAATCTGTTTGATA
ACCCTGTTTAAAaagtagagtataatttttatcattttctcttTACAGAA
AGTCGAAAAACGTATCGCGAGCTCGGCGGTGGGAGCCGAAACATCAATTC
TGTGCAATGTCAAAGACGTGTGGAGAAAACTTATCACAAAATGAACATCG
TCTCATCAGAAGACCAAGAAATAAATGGTATTAAGAAAAAGAAGTAAAGA
TGATTGTTCGACAACACAACAAAAGAAACGTCTTCAATGAACGAAGAATC
GGAGAACCCTCGGGAAAAGAGGAACGCTATACAACTGAAGGAGTAATTGT
TGTACTTCTTTTATTAattagttcatcattttttatacagggtgtcccta
attaaagtatcgagtttgaacatgcgattgagtagaaaagtttgtgtgtg
ttatcgctaaaatataagaacgttctccatcacacaggcttattacaaca
ggtagttacaacgtataaattaattgtAATGACAAAgtaaaaagagggag
agcttaaaatacaattttgtgaacacgcacataaaactttctactcatag
ttgtgtttcgactcgatactttaattagggacaccctgtaccaATACAAT
TTCTTGAACCGTAACCTAAatcttatttcttaaattcgaaaaatgctTTA
CAATGTCAAATCTTGTCAGAAATATCCCCCAACCCTATAAGCTCCTTCTA
TACCATATCAATTATTGCCATTGTTTTAAAGATTATATATCATGATTTAT
TATCTTACATTATCTTATtaatttatgtcattttatGTAAATAAGGCATA
CTTTAGATTTTTAGCACAAGAATTATGAGTGTACATAGATATTAATATgg
tttttttaatattgactttaattttaaagaagaaaatcatccaagaatat
ttaataatttaataTCTTATCGAATTTAACCTCGCGTCTAATTGTCGCTA
CAGTAaccagaaatttaatgtttccatattagaagttttttaccttttca
atgttatgaaaTGGAGCggatcaagtatttttttaagctAGAATATATAT
TCCCAATAACGAAACGTTGGTTATTTCTGGTCTAGACATCTGCATCTTTT
CGAAAATGCGTAAATAATAAANAAAATTATCcatgatatttttttgttta
tttgggCACACTCACTCATTCTCTCGCTCTTTACTCGTTTGATTATTTTG
GTTCACTCGTTTTCTCATACAAGAATACCCGGCAGCCATAAACcatgtac
acgtttttataagaacatgtaagagctatataagagcataaggctttgat
gaccaaaatattaagaacaagttaagaacattttaagaattcGTGAACTC
TAGAATACcaaatttcaaaggaaaaaaatggacaaaaatactcataacAC
Ggtgaaaatattaagaacatttttaggcttaaaactcaaaaagttaagaa
cacccgaaggcttcaaaaattttggatgctcttataaaaaatcatgtGAT
GTATGTAACTGTGTCTTTTTTTGTTGGAACAAAATACTGATTAATTGATT
CATATTTTTTCCATAGAATGAAACAGAGTTTTATCAAGCACCATCGTACA
ATTACCCAGACAGTAAGCCAACTTTATTCTGTCACTCGTTTATCCCCACT
tgaaaccaaattttgtcatctaGAATTGGCAACATTATTTCAGAGGACAT
CTTTAATGATGCATGCTGGGAAAAGATTTGGATGTATTCGTAATGCCAAG
AATAACTTTTTTAACATTTCAATCAAACTTGAAAATCTCATTTCCGGTGA
TAAAAACGCCCTTAAATTTAGACctcactgagaaattgactttaactttc
atccccattttaaatttaatggaaaaaacgtactccaaaaccatccacaC
TGAATCTTCAAGATCCAGCTTTTGAGCTGGGATCACCAATAAGATTACCA
TAGAAATTTTCACCCCCATTGTGGAAAGTAGCTCCACAGGGGCACTAAGA
CAGAGTCACACTGATTTATTTCaacgatttttcaatttttgttataGACA
AACCTAACCCATTTAGTGGCTCAACAAAGGTAAATCATAATATCCAcatt
taaattttctcaaaaccatttttctactttctatgagccttcgggtcgcc
tccaactgcggtcgcagacttactacttAGAACTAGTTTGTTAGTAATAC
TGTTTTACTTTCTATATGAAATATTATTCTTTCAATCGTTAAGTGTTACA
CTTAACGATATTGAGTAAGTCTaagaccgcagtcggaggcgacccgaagg
ctcctctttcgatagctatctaccggAAGGCAGGGGAGGGCGCCTCTTTC
Tcgctggattgctccacttacccttgatccttctcttaatggatgagcat
caagcagagaggcatcaagtaccatttctTTGTGAATGTTTGGTATGACA
CGGCTGGGGGTTGAAACACACAACCTTGcacaccgtagccggatgctcta
ccactgcactacggtcgctactAGTACTAATACAGTATTTAGGAAAGTTT
TCAGgataaattttttacaaattccAATCTGCTCTCAAATGATTAATCac
tttcttttcatttctaGGCCTTGTTCAATCAAACTAATCACCCTGGTAAC
CTACATATAAACAACAACGGTGGAAATAGCCCAGCGCCGCCCGTTCCTCG
ATCGCCAAGACCAAATAGCCGCCCAGTCTCAGCTGCATACAATAACGGTT
ATATAGATATGGCGAATGATAACCCACAACAATATACAGCCTTAAATTCA
AACACAAGGGTCGATCAGCAGTATCAGCCTATTAATTCACCAAAAGACAA
AATACCAACCTTGTCAGAACAGGATGAATATCTAGATTTAACAGACCCTA
AAAATAATAAGCAGCAGACTACACCAGGAGAGATATATACAGATCTAGAC
TATCAACCAGGAAATATATACGAAGGGGTTGCTCAACCTGGTCATAAAAA
TAATCCTCGAAATTACAATGGGTCTAATAATCCTTCAAAAACATCAGAGA
CATATGCGGATTTACAGGGAGCTCAAAGGACTCCAGAGACGTACCAAGAC
TTAAATACCGCGCGGCCGCCTGTCAACGAGACTTATGAGGATATAAAAAA
CGGGACAGATTATGATAATCCAACCGAATCTAAGTGATTTAGTGGACAAT
ATCTTGAACTCAATGGTTGAGTTTACTCTAGTTTACTTCCAAAAGAAGAT
CGTAAGTGGCCTATATGGTAAACTATCACCTACTgtgaaacacccccttc
tcacaaaccagTGGAAGGGgttcccaccgggtctgtgagaaggaggtgtc
tCTAAGAACCGACGTATTTCTTCAAGTAAACTATTTAGGGGTATTTAATG
ATGTGGTTTAAAAAGCAATGTTAGAGCAATTGAAGATTCTGTTCAAACTG
ATATGACACATTAATTTTAGTTGagaattttacatatttttatatattaA
TCTTAAATTATACATAAATTATTGCAATAACAGCTTTAAAGACAATTCGA
ATTCAAAAATTACTCAAAGCTACCCAAAGCAACATTTGTAAAAACGTTTG
TTTTGAATCATCGGGGGCTTTCTAGAGTTTGATTTTTATATCATAAATAT
AATAACTGAATAGTATGTTTATAATCCGATGTAATGACGATGTAATGtat
tatacggaagcacccgaaatAGCCTGGGCGTTTgaaggcttctgctcatc
ctctagtgaaaaagtttcttatagaagagaggaagtatatctatagaggt
ctgcgattcagaatAGGGCGTTTGACATTTGTTTCATTGCTCCAAATTCA
AAGTTAGTGGCAAAAAAACTGGTCTATTTtcggtgcttccgtataaaacg
ttacgtcacaaatatcaaaaatataacGTCATCATTAATGAGTGGCTTCC
ATACAATTGAAAGCATTGAGAGAACATGTGTATCGCAACATAGGGATGAA
TGATGGCATTGCTCTTTCGCAACGCAACGCATCATGCACACACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013505XLOC_013505Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024048-exon-sc0000471-1491911889:130077..130586TCONS_00024048-exon-sc0000471-1491911889:130077..130586Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1510915933:130077..130586TCONS_00024048-exon-sc0000471-1510915933:130077..130586Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1575043694:130077..130586TCONS_00024048-exon-sc0000471-1575043694:130077..130586Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1491911889:131452..131705TCONS_00024048-exon-sc0000471-1491911889:131452..131705Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1510915933:131452..131705TCONS_00024048-exon-sc0000471-1510915933:131452..131705Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1575043694:131452..131705TCONS_00024048-exon-sc0000471-1575043694:131452..131705Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1491911889:133550..133679TCONS_00024048-exon-sc0000471-1491911889:133550..133679Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1510915933:133550..133679TCONS_00024048-exon-sc0000471-1510915933:133550..133679Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1575043694:133550..133679TCONS_00024048-exon-sc0000471-1575043694:133550..133679Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1491911889:136550..136673TCONS_00024048-exon-sc0000471-1491911889:136550..136673Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1510915933:136550..136673TCONS_00024048-exon-sc0000471-1510915933:136550..136673Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1575043694:136550..136673TCONS_00024048-exon-sc0000471-1575043694:136550..136673Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1491911889:138121..138245TCONS_00024048-exon-sc0000471-1491911889:138121..138245Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1510915933:138121..138245TCONS_00024048-exon-sc0000471-1510915933:138121..138245Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1575043694:138121..138245TCONS_00024048-exon-sc0000471-1575043694:138121..138245Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1491911889:138413..138449TCONS_00024048-exon-sc0000471-1491911889:138413..138449Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1510915933:138413..138449TCONS_00024048-exon-sc0000471-1510915933:138413..138449Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1575043694:138413..138449TCONS_00024048-exon-sc0000471-1575043694:138413..138449Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1491911889:144693..144738TCONS_00024048-exon-sc0000471-1491911889:144693..144738Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1510915933:144693..144738TCONS_00024048-exon-sc0000471-1510915933:144693..144738Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1575043694:144693..144738TCONS_00024048-exon-sc0000471-1575043694:144693..144738Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1491911889:145174..145205TCONS_00024048-exon-sc0000471-1491911889:145174..145205Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1510915933:145174..145205TCONS_00024048-exon-sc0000471-1510915933:145174..145205Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1575043694:145174..145205TCONS_00024048-exon-sc0000471-1575043694:145174..145205Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1491911889:145744..147170TCONS_00024048-exon-sc0000471-1491911889:145744..147170Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1510915933:145744..147170TCONS_00024048-exon-sc0000471-1510915933:145744..147170Clytia hemisphaericaexon
TCONS_00024048-exon-sc0000471-1575043694:145744..147170TCONS_00024048-exon-sc0000471-1575043694:145744..147170Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000471supercontigsc0000471:130077..147170 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.539226	0	0	0.461628	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024048 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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