TCONS_00024007 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024007
Unique NameTCONS_00024007
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3589

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024007 ID=TCONS_00024007|Name=TCONS_00024007|organism=Clytia hemisphaerica|type=transcript|length=3589bp
CCAAAAATTCGATTTACGCATGCGTTGACTCCATCCTTTcagaaactttt
tttatgatCATTCGTGTAGAAATATTATATGTATTGTCTTCTTGCTTGAA
GAAGCCGGTAGCTTCGAGTAGTGTCAAGTAGCAAGCAACAAAAAAGGCTA
CTCGACGATGCAACTACcaacaaaataaattattttattgtgtctttttt
ttcttttatggtACTTGGCTTCTTTTAGCCTGGGCCTAAGCTCACCGGAC
AAGTCTGTGATGAAAACTCACACCAACAAGCTTTTATATTAATTCGATCA
TCAAACGTGAACCACCAAGACGTCAAGATTCCACCTACCAATATTTTATC
CCACCACAGCGGCCATATGGCTGTATGTAAAGCTCATGGCCCACCATATA
ATACATCTGCAGCCTTGACACCTCAGTCAAACATCACAGATGATGATGGC
CCAAGTTACAAGAAATATCGCTCATGTACCTCAACCAAGGAACCTTCTAC
TCCAACTTCCAGAGAACTCAAGACTCTTGAAGCTGACAGGCCCATTGGTT
ATGGTGCATTTGGTGTTGTCTGggCTGTTACTGACCCACGAACTGGGAAA
AGGATTGCTTTGAAAAAGATGCCAAATGTATTTCAGAATATTGTCTCAAG
TAAAAGAGTTTATCGAGAACTAAGAATGTTATGCTTCTTTAAACATGAAA
ACgttATCCAAGCACTTGACATTTTACAGCCAGACCCTGTAGATCACATG
GATGAGCTATATGTTGTTACAGAACTCATGCAAAGTGACTTACACAAAAT
TATAGTGTCACCTCAACCCTTATCCTCTGATCATGTGAAAGTTTTCTTGT
ATCAAATCCTGAGAGGCTTGAAGTATCTACATTCTATTGGCATTCTTCAC
AGAGATATCAAGCCAGGAAATCTCCTTGTAAACAGCAattgtttattgaa
aatttgtgattttggtTTGGCACGAAGTGAAGAACCTGATAGAACGAAAG
AAATGACACAAGAGGTTGTAACTCAATATTATCGATCACCAGAACTGCTT
TCAGGGGCAACATATCATTCATATGGAGtTGACATGTGGAGTGTAGGTTG
CATATTTGCTGAACTACTGGGACGTAAAATTCTCTTTCAAGCTCAATCAC
CCATTCAACAGCTGAATCAAGTGATTAAACTACTTGGTACACCACATCCA
GAAGATATCAGAGAGTCTGGAGCAAGTGAAGGGGCATTTCAATATATTAT
GTCACAGCCCTACCAACCACCTGTCATGCACACACTACACAATCTATCAC
CAAGAGCTAACCACGAGGCAGTCCATTTACTATGCAGGATGCTTGTTTTC
AATCCATATAAGAGAATTTCGGTAACAGATGCATTAACACATCCGTATCT
TGACGAGGGCAGACTTCGTTATCATACCTGCATGTGCACTTGCTGTAAAA
CAACTCCCTCTGGTAGGGTGTATGTTGATGCACTGGAACCTGCAAATACT
CTACCTTATGACCTGAATTATGAAGAACATCTGTATACTGTACATCAAGT
AAAGGAAGCAGTTAgtaattttatatccaattGGCATCGGCAGAAAGGAG
TTGTACCATTGTGTTTAAATACAGCATCACCTGTTTATCATCAATTCCAG
TCgTCAACAGTTGCTCCACAACCAGAATTGACAGACTCTCCACATCCATG
GTGAAGTGGGCCTGAAATTCTTTCAATTTGGTGTAAATTCGAGAGAGGTG
TCTCTATCCTTAGCGGTGCTGCTCAGCTGAAAACCATTGGTTTGTTTGAG
CAGAAGGTTGCATGAAGCTGTACTTCATGAGCAATGGAAAGTTTTTTAAG
CATTCCTGATAAGAAATCCGTTTTTAAGGAATACCAGACTACATAGTCCA
AGAAAgtaatttattttcataaaaagataATGGTCATCTAATGATCAAAT
GAGAGAACCCCCCTCTCTCTAACCATCAATGCGTTGAACCCTCAAGCAGT
AAAAGAAGACTTGACTGGGCAGAGACCAATGATACTCAACTACAACAAGA
TGTAAATATAATAAACagaacaatattttttatgatcACCATCCCCTCTT
CTAAAAACATGAATTATAATGCAAGTTAGCATAACaatgctttctttttc
tgtACTATTTTTACCATAATGTCTCCCTCGTATATCAGAAAACGATCATG
TttagtttcatttttatcgtgTATTAAGAGATTTTTagccaaaaatattc
aaatttagaACAACCAGTTTTTTAATCGAGAATAACTCGGCATTGCTAGT
TGACTGACTGCAAAAACTTGGTTGTATTTAAAGACGAATATGCTTATATT
TAAAACATTCATTTCAAGAGGAAGaataaaagcatttttttaacaatttt
tttccttGCTTTGCAGCGGGAAAGTTTAATAAATTATAGTTGTAAAATAT
GAGAATTTACAGAAACTACTTTATTTTCATTAGTCAATgtaatttgtttt
ttataaatattataaatattatcataatttttttcctcCCTTTCTCAATA
AAATGGCTTTAATcctcctttttcaaatttttcagcctTGAGATCTTTTT
GGAGGTATTTTTCTTTGTCCTCTTTTTTGTATATACTTGAATGGGTATAG
ATGCTCTTTGTTTTCGTGTTGTggctttttctaattttcttaactctttt
tttcaaatctattttttcttttcaatttatataatttttttttttcattt
tttaatcaattaagaTGTCAGAATTTATCGTAAGGATTTTAGAGCAAAAA
CATTCCTTTAGGTCTACTTTTATACAATTCTTAACATTTAGTTGTATTTT
GTGTTTGTTATTTTAAATAAAGTagtcacttttttttatttttcgattat
TTCGACAAAATTTGTTATTTCTCACTTtaacgaaaattttaaaacaaaat
aagtTTTCTAAGTTCAAGGGTCCAAGTTCTCTATTCTTTGCCACAGAAAG
TCACGTGATCCACTATTAACCAATGGGATTCAATCATTTCGTGTGGCAAA
GAATCGAGAAAGGAATAGTCACCCTTAAACAAATTGTTGAAACAAATCAA
CGTCATTATTCATCAAAAGacgttactttttctaaatcaTATTCTGGATG
ACGTCACTAAGTATGCACCACacctttcatttttatttagttCTCGTGTT
GAATTAGCCACGAAATTAgcttcttattttttcaaatgactAATATTGCA
GGAGAACCTTACTAACTGTGTAAGCTGGTAGTGAAATTACTATTGTAAGC
AGTTAAATGtagaaaattagaatttttttatcccaTAATTATATCGAAAA
CTTGTCAAATTGTATTTTCTACAAACCAATAAGTACTAATTATTTGTCAT
TCGtcatgttttttttgttaattataTCTCTATAATTACGTTTACCATTT
TGTACAGATATTATTGTAAATTACCTTTTCCCCTATTTTTCACACGCCTC
AGTGTTGTGGATACGAAATATTGTTTTGTTAAAAACCAACTAAAATCTCG
TTGAAAAACGAGgagaataaaaaaagttttaaaaacaaa
Run BLAST on NCBI

transcript from alignment at sc0000470:29992..37659-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024007 ID=TCONS_00024007|Name=TCONS_00024007|organism=Clytia hemisphaerica|type=transcript|length=7668bp|location=Sequence derived from alignment at sc0000470:29992..37659- (Clytia hemisphaerica)
CCAAAAATTCGATTTACGCATGCGTTGACTCCATCCTTTCAGAAACTTTT
TTTATGATCATTCGTGTAGAAATATTATATGTATTGTCTTCTTGCTTGAA
GAAGCCGGTAGCTTCGAGTAGTGTCAAGTAGCAAGCAACAAAAAAGGCTA
CTCGACGATGCAACTACCAACAAAATAAATTATTTTATTGTGTCTTTTTT
TTCTTTTATGGTACTTGGCTTCTTTTAGCCTGGGCCTAAGCTCACCGGAC
AAGTCTGTGATGAAAACTCACACCAACAAGCTTTTATATTAATTCGATCA
TCAAACGTGAACCACCAAGACGTCAAGATTCCACCTACCAATATTTTATC
CCACCACAGCGGCCATATGGCTGTATGTAAAGCTCATGGCCCACCATATA
ATACATCTGCAGCCTTGACACCTCAGTCAAACATCACAGATGATGATGGC
CCAAGTTACAAGAAATATCGCTCATGTACCTCAACCAAGGAACCTTCTAC
TCCAACTTCCAGAGAACTCAAGACTCTTGAAGCTGACAGGCCCATTGGTT
ATGGTGCATTTGGTGTTGTCTGGTAAGTGAATTGCTATATGCTGTCTAAC
TTTGTCATTGAAAGATTTTATTTATACAATGTATGGCTGCTTATTTAAAA
TATATTTTTTCTTCCCCACCAATCAAATAACTTCAAACTGGGTTATTCAA
AAAACAGGGCTGTAAAACAGCTATGGATGTCGGTCATGAGGAAAGAACCT
CATAGAAAAGTTTCTTCGATCAATTACTTTGTATGGTTGAAACAGCCCAT
TCTACATGAGTTGAAAAAGTAGTTTTTCAAGACCTTTCCTATTGTTCAAG
TTCACTCAGGCCTGTAAACTTCAAATTCAAAATTTCCAAGGCGAGAGAAG
AAAATGTATGTATTTCCAAGGCAATTGAATTAAAAAACGCGAAAAAGAGT
GGAATTTCCGATGCATTTTGCAAAAGTACATGAATTTTTATTGGAATTTC
TGACCACCACTGGAAAAAAAAAAATATTTCTGAGGCTAGAAAAAATTAAA
AAATGTAGTCCGATGGGGGGTAACAAAAATTTTCTGGAATGGCCCACTTT
AAGACGAGGCCAATTTGATATGTTGTTTTACGGGCCAAGCTACCCAAAAA
AGAGCCAAAAAAGATGGAAGGTCGGTCAGCAAAAAAATAAAAATAAAAGT
AGAATTTTACCTATGAAATTTAAAACTACTGCATCTTGACAAAAAAGGGA
AATAGAAAATTAAAAGGCACAAAAAGGTCAAATTCATGGCTAAAATGAAA
AATTTAACATAAAATACTTACTAAATTGTTACCTGTGTTACTTANTATTT
CTGAGGCTAGAAAAAATTAAAAAATGCACGTCGTCCGACAGGGGGTAACA
AAAATTTTCTGGAATGGCCCACTTTAGATACAAGACGAGGCCAATTTGAT
ATGCTGTTTTACAGGCCAAGCTACCCAAAAAAGAGGGAAGGTCGGTCAGC
AAAAAAATAAATATAAAAAGAAAAAGAAATATAAAACTACTGCATCTTGA
AAGGGGAAAAGAAAAGGGAAATAGAAAATTAAAGAAAATTAAAAGGCGCA
AAAAGGTCAAATTCATGGCTAAAATGAAAAATTGAACATAAAATACTTAC
TAACTTGTTACCTGTGTTACTTATTCTCAAAACTGGTATTACTGACTGGT
CAGAGACGATGAATTGGGAGAAATCCTTCCAGTGTAGTAGTTGGTGGATT
CCAACACACTAGCAATGTGGAGATGGATTTCTCCCAATTCATCGTCTCTG
ACCAGTCAGTAGATAAGAATTCACTTCCAGCTCTACCAAGTGGCAATTGA
GTCATCGGGTTCCACATGGACCCCAGGCCATTTTTCATGCCCTTTTAGCG
TCCGGTCATCGGACGCTGCCCCTCCTAAAATCTCTAAAATTTTGGTAAAA
ACAGTCTTTTTAGCAGAAAAACACAAGAAAAAGTGCCCTTTTTGGCCACC
AACGGACGCTGCCCTGCCTTTCTAAAATATGACCTGGACCCGTAGCTCAA
TGGTAGAGCAAATTCCCGCGAATGGCATGGTTGTGAGTTAGAGTCTTGCC
GGATCTGTTGGTTTTCCAACGGTTCTGGTGGCTGGTCAGAAAACAATATG
AGAGCGACTGTATTCACCTCACTGTAATACATAAGGGCAATATTCATGAT
TAATAACTCTCATTATAATTTTTCATTTTTGTTATTTTAGGGCTGTTACT
GACCCACGAACTGGGAAAAGGATTGCTTTGAAAAAGATGCCAAATGTATT
TCAGAATATTGTCTCAAGTAAAAGAGTTTATCGAGAACTAAGAATGTTAT
GCTTCTTTAAACATGAAAACGTAAGTTGTTGAAAATTTGTCCATCCTTTT
TTGCAATTAGGAGAAGCATTGATTTTTCAAATATTTTAATAATTGAAAAA
CTTTATTTTGACTTAAAACAAGTTGTTTATCTTTTTATCTATATTTCAGT
ACAAAAAGATCCTAGGACCCATGTAAGAAATGAAATTGAACCCTCTCATG
ATTTTTCTTTTTTCAGGTTATCCAAGCACTTGACATTTTACAGCCAGACC
CTGTAGATCACATGGATGAGCTGTATCTTTTTCAAATTTTTCACCTATAA
TTGTAAAAAGAAGAGAGAAAAAATCTTTTCCTCTTTCAATAATACTACCC
ACAGCTTGGGTGTGCTTTTTATCACAGGGTATTATGGTAATGTTAAAGGG
CAAACACTTTCCCTCCTATAAAGGTTATGTGTGTGCTTATTGTTTTGAAA
GCCACTGTCACAAACTGTGCATATCAGGCCCTATTATTGTTGAGATTAAA
CTGTAATTGAACATTGTCCACCCGGTTTCTGTCAATAATTACACATGAGG
TGAAATGACAGTAATCAATCAAGTGGTCTTCAAATAATAGTTAACATTGT
TAACTTCTTTCTCTTAACACCTGGGCTAGCTAATTAGAAAAAGTCATTAA
AAGTTTTAATTATCATGAATGATAGTTGGAATTGAATGGCATCTTTTCGA
ATGTTATGATTTTTTCATGAAAGTGTTTTTCCTTAACTCAGACTTTTTAT
GCAGATATGTTGTTACAGAACTCATGCAAAGTGACTTACACAAAATTATA
GTGTCACCTCAACCCTTATCCTCTGATCATGTGAAAGTTTTCTTGTATCA
AATCCTGAGAGGTATTTCATTATATACATTTTATCTTTAGAATTGACATT
TATTATTAAAACATTTTCTTTCAATGAAGCATGATTTGATTTTGAATGAA
AGCCACATGGGTTTTCACAATATACAACTGTTTTCTATACATAAATATTA
CCTGTTTTTTATCTTTTTCTTTTGTTTATTGTTCACATTTCACAAGATGC
ATTCCTTGCATTTCCCTTATTAACTTATGGATTAAACTTATTTTTTAGGC
TTGAAGTATCTACATTCTATTGGCATTCTTCACAGAGATATCAAGCCAGG
AAATCTCCTTGTAAACAGCAATTGTTTATTGAAAATTTGTGATTTTGGTT
TGGCACGAAGTGAAGAACCTGATAGAACGAAAGAAATGACACAAGAGGTA
CACATGCAATTTGATATTATTTAGATGAAATTTGAGTTGACATCGATACA
ACACATTGATGTTTCACATAATTTTGACTACTATATTAATTTTGACAACC
TTTTTTATTCTTTAAAATTAGAATTCACGTAAAAATATTAGAATGCTGCA
AGTCACTTAAAAAGATTTATTTTAGTAAATTTCTTTCTTGTATTGTAGGT
TGTAACTCAATATTATCGATCACCAGAACTGCTTTCAGGGGCAACATATC
ATTCATATGGAGGTTTGTTCAATCCCTTGATCTTATCTTTTGTTGTTCTG
CTTTGACACCACTCCTCTGTTGGATTTGTTGTTTAGTGTTAATTTTGATT
TGAGAAATTAGTACAAATTCCTTTGTCTCAGGCATATCAGGGACTGCTTT
TCCTCTTTTCGAGCAATTCTTTTACAACACTGAACTTTTACTTTATTAAA
GTCTTTTTCACATGTACATAAATCTTACTTTAGACCTTACGGAAAATTGT
TCTTAAGGTTGTCTTTTGGGAATTTCCCCGCCCTTACGTACAGTTTTTCT
GAGGGTCTTAAGTGACTTTTCAAAGCAAACTAACCAAACTCTACTTAAGG
CCTTAAAACACTACATAAGCTTAGGGAAATCCCCCGCTCTCTAAGGTCTT
AAGTAAAGTTTTACGTGCATGTGAAAAAAGCTTAACAGACATGATTTTCA
TCTCCATGTTTTCTTTTTGTTTCAGTTGACATGTGGAGTGTAGGTTGCAT
ATTTGCTGAACTACTGGGACGTAAAATTCTCTTTCAAGCTCAATCACCCA
TTCAACAGGTAATAAGCTTCACCAAATTTTCTCATATTATTTACTGTTTC
AATTTGTTGAGCCAATTTTGGTATGTTAAGCTACGAATACATATACAGTT
CACTCACTTGATTTTTACGGGGCAAAGAATTTTTTTTCAAATTAGAGAAA
AATTCTAATTATGGAGAGCAGTTTTTTTCCAGCTGAAGAGACCAGTGTCT
CTGTTCGAACTACAGAAAGATTGAAATAAAAGAGGTTTTAATTAGATTGA
CTGTATTTTGAAATTCTATTGTATTTAACTCTTTATTCAACTTTTTACTT
TTGAATTTCAGCTGAATCAAGTGATTAAACTACTTGGTACACCACATCCA
GAAGATATCAGAGAGTCTGGAGCAAGTGAAGGGGCATTTCAATATATTAT
GTCACAGCCCTACCAACCACCTGTCATGCACACACTACACAATCTATCAC
CAAGAGCTAACCACGAGGCAGTCCATTTACTATGCAGGATGCTTGTTTTC
AATCCATATAAGAGAATTTCGGTAACAGATGCATTAACACATCCGTATCT
TGACGAGGGCAGACTTCGTTATCATACCTGCATGTGCACTTGCTGTAAAA
CAACTCCCTCTGGTAGGGTGTATGTTGATGGTATGTTGCTTGATTTTGTT
TGTTACTAATGTTCCCTTACTAGTCTAAGACTATTCCAGTCTTTTGCATA
TCCTCACTGCTCATTTTAATGACAATGCACAATGCAACAGGTACGACCAG
GTACGACAGGTACAATGGCTGCTATACCAGATTTTCACAAAAAAAAACCC
GAAATTTTCCTTTTCGTCAGTAAGGACATTATGTTGTATGTTCTCAAGAG
ATAACTTTTTAATTGTTTCTTTTTTAGCACTGGAACCTGCAAATACTCTA
CCTTATGACCTGAATTATGAAGAACATCTGTATACTGTACATCAAGTAAA
GGAAGCAGTTAGTAATTTTATATCCAATTGGCATCGGCAGAAAGGAGTTG
TACCATTGTGTTTAAATACAGCATCACCTGTTTATCATCAATTCCAGTCG
TAAGTATAAACTTTCAAGCTTGAGGGAACTTAACCAAATTTTGGGTATGG
TAATTGCTTCTTTTACATCTTTTATCACATTAGTTTTTATTATTGATTCA
TTATTGATACTTGGTCAACAGTGTGTGGACAACTTATTGTCTTTATCAAG
ATTCCTAAACCCTACATTTTAACTCGAATAGNGGACAACTTATTGTTTTT
ACAGGTTTTTATCAAGATTCCTAAACCCTACATTTTAACTCAATAAAAAA
TGGATTTAATGTGTTGAAAATTTTTTTACAGGTCAACAGTTGCTCCACAA
CCAGAATTGACAGACTCTCCACATCCATGGTGAAGTGGGCCTGAAATTCT
TTCAATTTGGTGTAAATTCGAGAGAGGTGTCTCTATCCTTAGCGGTGCTG
CTCAGCTGAAAACCATTGGTTTGTTTGAGCAGAAGGTTGCATGAAGCTGT
ACTTCATGAGCAATGGAAAGTTTTTTAAGCATTCCTGATAAGAAATCCGT
TTTTAAGGAATACCAGACTACATAGTCCAAGAAAGTAATTTATTTTCATA
AAAAGATAATGGTCATCTAATGATCAAATGAGAGAACCCCCCTCTCTCTA
ACCATCAATGCGTTGAACCCTCAAGCAGTAAAAGAAGACTTGACTGGGCA
GAGACCAATGATACTCAACTACAACAAGATGTAAATATAATAAACAGAAC
AATATTTTTTATGATCACCATCCCCTCTTCTAAAAACATGAATTATAATG
CAAGTTAGCATAACAATGCTTTCTTTTTCTGTACTATTTTTACCATAATG
TCTCCCTCGTATATCAGAAAACGATCATGTTTAGTTTCATTTTTATCGTG
TATTAAGAGATTTTTAGCCAAAAATATTCAAATTTAGAACAACCAGTTTT
TTAATCGAGAATAACTCGGCATTGCTAGTTGACTGACTGCAAAAACTTGG
TTGTATTTAAAGACGAATATGCTTATATTTAAAACATTCATTTCAAGAGG
AAGAATAAAAGCATTTTTTTAACAATTTTTTTCCTTGCTTTGCAGCGGGA
AAGTTTAATAAATTATAGTTGTAAAATATGAGAATTTACAGAAACTACTT
TATTTTCATTAGTCAATGTAATTTGTTTTTTATAAATATTATAAATATTA
TCATAATTTTTTTCCTCCCTTTCTCAATAAAATGGCTTTAATCCTCCTTT
TTCAAATTTTTCAGCCTTGAGATCTTTTTGGAGGTATTTTTCTTTGTCCT
CTTTTTTGTATATACTTGAATGGGTATAGATGCTCTTTGTTTTCGTGTTG
TGGCTTTTTCTAATTTTCTTAACTCTTTTTTTCAAATCTATTTTTTCTTT
TCAATTTATATAATTTTTTTTTTTCATTTTTTAATCAATTAAGATGTCAG
AATTTATCGTAAGGATTTTAGAGCAAAAACATTCCTTTAGGTCTACTTTT
ATACAATTCTTAACATTTAGTTGTATTTTGTGTTTGTTATTTTAAATAAA
GTAGTCACTTTTTTTTATTTTTCGATTATTTCGACAAAATTTGTTATTTC
TCACTTTAACGAAAATTTTAAAACAAAATAAGTTTTCTAAGTTCAAGGGT
CCAAGTTCTCTATTCTTTGCCACAGAAAGTCACGTGATCCACTATTAACC
AATGGGATTCAATCATTTCGTGTGGCAAAGAATCGAGAAAGGAATAGTCA
CCCTTAAACAAATTGTTGAAACAAATCAACGTCATTATTCATCAAAAGAC
GTTACTTTTTCTAAATCATATTCTGGATGACGTCACTAAGTATGCACCAC
ACCTTTCATTTTTATTTAGTTCTCGTGTTGAATTAGCCACGAAATTAGCT
TCTTATTTTTTCAAATGACTAATATTGCAGGAGAACCTTACTAACTGTGT
AAGCTGGTAGTGAAATTACTATTGTAAGCAGTTAAATGTAGAAAATTAGA
ATTTTTTTATCCCATAATTATATCGAAAACTTGTCAAATTGTATTTTCTA
CAAACCAATAAGTACTAATTATTTGTCATTCGTCATGTTTTTTTTGTTAA
TTATATCTCTATAATTACGTTTACCATTTTGTACAGATATTATTGTAAAT
TACCTTTTCCCCTATTTTTCACACGCCTCAGTGTTGTGGATACGAAATAT
TGTTTTGTTAAAAACCAACTAAAATCTCGTTGAAAAACGAGGAGAATAAA
AAAAGTTTTAAAAACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013488XLOC_013488Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024007-exon-sc0000470-1575043694:37088..37659TCONS_00024007-exon-sc0000470-1575043694:37088..37659Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1575043694:35290..35419TCONS_00024007-exon-sc0000470-1575043694:35290..35419Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1575043694:35038..35093TCONS_00024007-exon-sc0000470-1575043694:35038..35093Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1575043694:34449..34555TCONS_00024007-exon-sc0000470-1575043694:34449..34555Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1575043694:34063..34211TCONS_00024007-exon-sc0000470-1575043694:34063..34211Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1575043694:33798..33861TCONS_00024007-exon-sc0000470-1575043694:33798..33861Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1575043694:33252..33334TCONS_00024007-exon-sc0000470-1575043694:33252..33334Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1575043694:32630..32948TCONS_00024007-exon-sc0000470-1575043694:32630..32948Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1575043694:32211..32382TCONS_00024007-exon-sc0000470-1575043694:32211..32382Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1575043694:29992..31928TCONS_00024007-exon-sc0000470-1575043694:29992..31928Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1510915933:37088..37659TCONS_00024007-exon-sc0000470-1510915933:37088..37659Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1510915933:35290..35419TCONS_00024007-exon-sc0000470-1510915933:35290..35419Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1510915933:35038..35093TCONS_00024007-exon-sc0000470-1510915933:35038..35093Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1510915933:34449..34555TCONS_00024007-exon-sc0000470-1510915933:34449..34555Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1510915933:34063..34211TCONS_00024007-exon-sc0000470-1510915933:34063..34211Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1510915933:33798..33861TCONS_00024007-exon-sc0000470-1510915933:33798..33861Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1510915933:33252..33334TCONS_00024007-exon-sc0000470-1510915933:33252..33334Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1510915933:32630..32948TCONS_00024007-exon-sc0000470-1510915933:32630..32948Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1510915933:32211..32382TCONS_00024007-exon-sc0000470-1510915933:32211..32382Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1510915933:29992..31928TCONS_00024007-exon-sc0000470-1510915933:29992..31928Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1491911889:37088..37659TCONS_00024007-exon-sc0000470-1491911889:37088..37659Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1491911889:35290..35419TCONS_00024007-exon-sc0000470-1491911889:35290..35419Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1491911889:35038..35093TCONS_00024007-exon-sc0000470-1491911889:35038..35093Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1491911889:34449..34555TCONS_00024007-exon-sc0000470-1491911889:34449..34555Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1491911889:34063..34211TCONS_00024007-exon-sc0000470-1491911889:34063..34211Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1491911889:33798..33861TCONS_00024007-exon-sc0000470-1491911889:33798..33861Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1491911889:33252..33334TCONS_00024007-exon-sc0000470-1491911889:33252..33334Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1491911889:32630..32948TCONS_00024007-exon-sc0000470-1491911889:32630..32948Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1491911889:32211..32382TCONS_00024007-exon-sc0000470-1491911889:32211..32382Clytia hemisphaericaexon
TCONS_00024007-exon-sc0000470-1491911889:29992..31928TCONS_00024007-exon-sc0000470-1491911889:29992..31928Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000470supercontigsc0000470:29992..37659 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.53424	5.67345	5.40268	6.4937	56.8854	54.2407	25.5416	34.0526	17.7765	16.9555	17.7152	18.6822	23.0047	21.19	18.0663	14.6735	17.4227	21.7742	19.1952	22.2589	28.1418	29.5952	17.3551	24.5063	12.2713	19.191	38.206	34.5948	38.078	32.9779
Blast
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BLAST of TCONS_00024007 vs. Swiss-Prot (Human)
Match: NLK (Serine/threonine-protein kinase NLK OS=Homo sapiens GN=NLK PE=1 SV=2)

HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0
Identity = 267/393 (67.94%), Postives = 313/393 (79.64%), Query Frame = 1 
Query:  526 LEADRPIGYGAFGVVWAVTDPRTGKRIALKKMPNVFQNIVSSKRVYRELRMLCFFKHENVIQALDILQPDPVDHMDELYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSIGILHRDIKPGNLLVNSNCLLKICDFGLARSEEPDRTKEMTQEVVTQYYRSPELLSGATYHSYGVDMWSVGCIFAELLGRKILFQAQSPIQQLNQVIKLLGTPHPEDIRESGASEGAFQYIMSQPYQPPVMHTLHNLSPRANHEAVHLLCRMLVFNPYKRISVTDALTHPYLDEGRLRYHTCMCTCCKTTPSGRVYVDALEPANTLPYDLNYEEHLYTVHQVKEAVSNFISNWHRQKG-VVPLCLNTASPVYHQFQSSTVAPQPELTDSPHPW 1701
            +E DRPIGYGAFGVVW+VTDPR GKR+ALKKMPNVFQN+VS KRV+REL+MLCFFKH+NV+ ALDILQP  +D+ +E+YVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHS GILHRDIKPGNLLVNSNC+LKICDFGLAR EE D ++ MTQEVVTQYYR+PE+L G+ ++S  +D+WSVGCIFAELLGR+ILFQAQSPIQQL+ +  LLGTP  E +R   A EGA  +I+  P++ P +  L+ LS +A HEAVHLLCRMLVF+P KRIS  DAL HPYLDEGRLRYHTCMC CC +T +GRVY    EP     +D  +E++L +V QVKE +  FI    +QKG  VPLC+N  S  +  F SSTVA   E+  SP  W
Sbjct:  138 IEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRT--ACEGAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTGRVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFI--LEQQKGNRVPLCINPQSAAFKSFISSTVAQPSEMPPSPLVW 526
The following BLAST results are available for this feature:
BLAST of TCONS_00024007 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NLK0.000e+067.94Serine/threonine-protein kinase NLK OS=Homo sapien... [more]
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