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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023999 ID=TCONS_00023999|Name=TCONS_00023999|organism=Clytia hemisphaerica|type=transcript|length=543bp
TTTTGAATAACCCAGTTTGAAGTTATTTGATTGGTGgggaagaaaaaata
tattttaaataagCAGCCATACATTGTataaataaaatctttcaaTGACA
AAGTTAGACAGCATATAGCAATTCACTTACCAGACAACACCAAATGCACC
ATAACCAATGGGCCTGTCAGCTTCAAGAGTCTTGAGTTCTCTGGAAGTTG
GAGTAGAAGGTTCCTTGGTTGAGGTACATGAGCGATATTTCTTGTAACTT
GGGCCATCATCATCTGTGATGTTTGACTGAGGTGTCAAGGCTGCAGATGT
ATTATATGGTGGGCCATGAGCTTTACATACAGCCATATGGCCGCTGTGGT
GGGATAAAATATTGGTAGGTGGAATCTTGACGTCTTGGTGGTTCACGTTT
GATGATCGAATTAATATAAAAGCTTGTTGGTGTGAGTTTTCATCACAGAC
TTGTCCGGTGAGCTTAGGCCCAGGCTAAAAGAAGCCAAGTaccCATTCtc
ataatttttctttgagatGATCCCTGTCACTAATACCGAAGAT Run BLAST on NCBI transcript from alignment at sc0000470:36958..39553+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023999 ID=TCONS_00023999|Name=TCONS_00023999|organism=Clytia hemisphaerica|type=transcript|length=2596bp|location=Sequence derived from alignment at sc0000470:36958..39553+ (Clytia hemisphaerica)
TTTTGAATAACCCAGTTTGAAGTTATTTGATTGGTGgggaagaaaaaata
tattttaaataagCAGCCATACATTGTataaataaaatctttcaaTGACA
AAGTTAGACAGCATATAGCAATTCACTTACCAGACAACACCAAATGCACC
ATAACCAATGGGCCTGTCAGCTTCAAGAGTCTTGAGTTCTCTGGAAGTTG
GAGTAGAAGGTTCCTTGGTTGAGGTACATGAGCGATATTTCTTGTAACTT
GGGCCATCATCATCTGTGATGTTTGACTGAGGTGTCAAGGCTGCAGATGT
ATTATATGGTGGGCCATGAGCTTTACATACAGCCATATGGCCGCTGTGGT
GGGATAAAATATTGGTAGGTGGAATCTTGACGTCTTGGTGGTTCACGTTT
GATGATCGAATTAATATAAAAGCTTGTTGGTGTGAGTTTTCATCACAGAC
TTGTCCGGTGAGCTTAGGCCCAGGCTAAAAGAAGCCAAGTaccataaaag
aaaaaaaagacacaataaaataatttattttgttgGTAGTTGCATCGTCG
AGTAGCCTTTTTTGTTGCTTGCTACTTGACACTACTCGAAGCTACCGGCT
TCTTCAAGCAAGAAGACAATACATATAATATTTCTACACGAATGatcata
aaaaaagtttctgAAAGGATGGAGTCAACGCATGCGTAAATCGAATTTTT
GGCCAACTTCAACCCCAGACTTCTTGAATTTTTGTCTTTCGTGGGAAAAA
AAAAGACTCGGCACGAagtgaaaatttaaagtttcaattccggtctgtaa
attacagCACCatgtaaacaaatcaaaattacGGTTTCGCTTTGTGATGC
GTTCTCAACTTGGTGAAACTACTTACCAGATTTTAGTagaaaaatccgac
aaaatcAAAGGGAGAACGATACGAAAAAAGCGTCCATTCAAATTGATTCG
ATAAATGTTTAATTTTCTAAGAgatcttttctcattttttctctCCTCTC
CTTTGATTTTTCTCTTGTCAAATAGAAACTATATGAATCATAAACTGCTA
GTCCTTCTATCAaatacacacacacacacatatGTCCTCTTTCCCTCTCT
AACTACTCTTGAAAAAATAGTTTATcatcatttaaaaaagatatGACACA
AAGTACTTTTCCCTTATACAAAATCTATTCATAAACAACGTCACTCTTGG
TCATGTTATGcgagttatgacgtcaaaaCTAATGACACCATTAAGCCTAT
CCTATAGAAGGACTCCATTTTTTTGTGTTAGTGTCTTGAAATATTGAAAC
AGATAACCTTTTTGtgcaagtttttattttgagCTCAATTTTGTGTAAGA
GTGTcagaaaattgttaaaaatacatCATGTACTATGTCACTAAAGAAGA
GGCGTGATTTTGCATGCCGTCTCCGTCAAACTTCACGGCGCAAAAATGTA
AACGCATGCCTCCGTGGTACACCAGTGTCTTATCTGATTTGAATGCGTAT
CAACGGCCGCCGACGGCCACCCACGCTTTAGCTCTTAAAACCAGAGATCT
CTAACTTAGATCATGCAGAGGAATGTatagagatggaaaaacagcttctt
gaaaacaatggacaaacggctcgtcatataccaggtctcttgcccttaag
ggagtttatgtcgagtaaataggtttcttttgttgccgctataaaaaatc
tgcataattagcgtgctgtgacaaaattcttttgtttcaagcctgattat
gcgcaaacttttagggctatTTTGGTTACACCTctgctatacgaaaaggt
acctatatcttcttgctcagaatttcctagcgattctactgatataaccg
cgtCATggccgcaccataatatggaaagctagagctcgagaaaaattata
acttcatcttgattttactcgacttctgatagttttacaagaaccaatag
accttttcgcctttgcgtccgccatattgaattgtatgcaaaaatacagg
aacgaaaatgccgtggttggatttagttggaatgtatgcaaaacatatNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatttaa
tatcattgcgttaagaatttcttttgctgtacattggtaaaaatattgct
ccttattcttaaaaattgaactagtaatcggcaaaaaaggaaaaacaaat
tttcattttcatcgtcaaatcatgtagaaaccgtccgatttgtatggcga
gccgtcttttctggactttcacttaatgacctaatcaacgtttttacaat
agaagtgatcgttgaactttgagtaatctgaaaagctgtttttccatctc
tttacattcctctggatCATGTGTGTGGTACAGCTAtcgtaaaattaagt
tttagttaatcaaagtttattttcaatatatGATATATATACCTACCATT
CtcataatttttctttgagatGATCCCTGTCACTAATACCGAAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023999-exon-sc0000470-1491911889:36958..37450 | TCONS_00023999-exon-sc0000470-1491911889:36958..37450 | Clytia hemisphaerica | exon |
| TCONS_00023999-exon-sc0000470-1510915933:36958..37450 | TCONS_00023999-exon-sc0000470-1510915933:36958..37450 | Clytia hemisphaerica | exon |
| TCONS_00023999-exon-sc0000470-1575043694:36958..37450 | TCONS_00023999-exon-sc0000470-1575043694:36958..37450 | Clytia hemisphaerica | exon |
| TCONS_00023999-exon-sc0000470-1491911889:39504..39553 | TCONS_00023999-exon-sc0000470-1491911889:39504..39553 | Clytia hemisphaerica | exon |
| TCONS_00023999-exon-sc0000470-1510915933:39504..39553 | TCONS_00023999-exon-sc0000470-1510915933:39504..39553 | Clytia hemisphaerica | exon |
| TCONS_00023999-exon-sc0000470-1575043694:39504..39553 | TCONS_00023999-exon-sc0000470-1575043694:39504..39553 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000470 | supercontig | sc0000470:36958..39553 + |
Blast
The following BLAST results are available for this feature:
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