TCONS_00023807 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023807
Unique NameTCONS_00023807
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3286

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023807 ID=TCONS_00023807|Name=TCONS_00023807|organism=Clytia hemisphaerica|type=transcript|length=3286bp
gttttagattaatttgttattttattacaaaatttagTTACAAACAGAAG
GTATTTTCAAGATGACGTCGATGGGAATGAGTTCCTTGTTCTCTTTTACT
TCTCCTGCTGTCAAACGACTGCTTGGTTGGAAACAAggagatgaagaaga
aaaatgggCAGAAAAAGCTATAGATTCACTTGTCAAGAAGTTGAAGAAAC
GAAAAGGTGCCTTGGAAGAATTAGAGAAAGCTTTGTCCAATCCAACTGGA
GAATCTAATTGTGTCACAATTCCAAGAAGTTTGGATGGTCGTTTACAAGT
TTCTCATCGTAAAGGTCTTCCTCATGTTATATATTGTCGTGTATGGAGAT
GGCCAGACTTACAAAGCCACCACGAATTAAAACCATTAGAATGTTGCGTT
TATGCCTTTAGTTTGAACAAAAAAGAAGTTTGTATCAATCCATACCATTA
CCGTCGTGTTGAAACACCAGttCTTCCACCAGTATTGGTTCCACGTCAAA
GTGAATACCCACGAGGACCACTTCCATATCATATGCAACATGCTAATCAC
CAAGGAATGCCAAACAATGCAAACTTTCCTTCATTTTCACATTCCAGATC
ACCTGGTGCTCCTGGTGAAGGACCACCTGGTTATAATGGAGTCATGTCTG
AGGATGGTGGTAGTCCACGGCCAGATCTCTCAATGGATGCTGATAACATC
CCACCAGATGTTACACCAATCACCTATAACGAACCAACAAACTGGTGCTC
CATTGCATATTATGAATTGAATATCCGTGTTGGAGAACCATTCCAAGCTT
CTGGAACCAGTCTTGTAATTGATGGGTTTACTGATCCTAATACAAGCTCT
GATCGATTTTGCCTTGGTGGTATGTCAAATGTTAACCGTAATTCAACAAT
CGAAAATACACGCCGGCATATCAGTAAAGGAGTTCATTTGTATTACGTTG
GTGGGGAAGTTTTTGCTGAATGTCTCAGTGATAGTGCTATATTTGTTCAA
AGTCGAAATTGTAATTACCATCATGGATTCCATCCCACAACAGTTTGTAA
AATCCCACCTCAATgtactttgaaaattttcaataatcaaGAATTTGCTC
AACTCTTATCGCAAAGTGTTAACCATGGCTATGAAGCTGTTTACGAACTT
ACTAAGCATTGTACTATTAGAATGAGTTTTGTTAAAGGATGGGGTGCAGA
ATATCACCGTCAAGATGTAACAAGTACACCGTGCTGGGTTGAAATTCATC
TCCATGGTCCTTTACAATGGCTTGATAAAGTATTAACACAAATGGGTTCT
CCTGCAGGAATCATTGGGTCGGTATCATAAAATCAAATCAGGACTAAAAT
CATGTTGTCATAAAACTGTTTTGTTACTACCATGTTTTAGTTGGTTTGTT
TGATAGATATGGGTGGATCAGTCAGAGAAATACAGGTTCAACATCCAAAA
TCGagaggaaaaatgaaattgctaTTTTTACTACATACTAATAAATCAGA
ACATGACGTAACGTTAGAAACTATGGAACTGCTAATAAAATTAATAACAC
ACAATTCTAAAGAATCCAGAGTAGTTATATATACAGCAGAATCTATATTT
TATAGCAGAAATTATAATTTTCCTAAACAAGCTTCTTGTGTTCACAGTTT
TCGAATATATGAAGGTCAACGAAATTTATTACAATGTACCGTATGAAGAA
GTTGTTAACATTGATCAATCTAAAGTATGTTACAACAAaggagatttttt
ttaaaatactaatatttattatttttgtctCTCGTTAGTAACCtgtgtaa
aatatattatttttgcGAATGTTTGGTCCAATGCAAGGTAATCTTGTAAG
GATTCTAGAGAGATGAAATCGTTTTTCCCTTAATTTTTCTAAGCAGTAAA
AATAAACCAATTCTCTTTTTGCACGATTACAATTATGTGTTTGGGCCTTT
TACCTTTTTAATAATAATCCTCTATATTCTAATATCTAATAttatacttt
tgttttcataatgttTTATATATACCTTGCAATATTCTTTTAGCTACCCA
TTTTGTAATTATGTTTCAGTTGACAGTGCCAGAAACATTTATACAAAAAT
GAACGCTAATGGAAGTGTTTTAAAGGGTATGCTACTTTTTTCAGTCAAGC
TAGTACAGTTTCTAATGTCATTTTTGTCTTGTTTACGTGTTATGCTTCTC
ATGTTTTGTCTCGATTATTCAGTCATGAAAGTAAGCTCTTTAGCTTGAAC
AAGTTTTCCCATATTTCAGCGTCCAACGTTCTGtttatttagcaaaaaaa
ttactttttttaaattgtaaatttcatttgtagattttttttgacataga
cagtattttttttgtttacgcTGCTAGCTTCTTATATGATTTATACGCGC
TTTGCGATTTTTGACATCCGTTCGACTTAGTACTTTTTAGTTTTCGATTC
AACTTTTTGACTGAATCAGgtaattgattgtttttttcaataattcttGA
TGCCCATCTTTGTACGGAAAGACCCGTCAAAAACTGATTACCTACAAGCT
TTTGGAATATAACcggtgtttttcatttgtatcCATACAAAAGATAAGGg
cttgaatttcaaaatatagtACCTTCTCAACCCGGAAAACTAATTAGGGC
AAGTTTTGTCAATGATCTGTTCGTagcatttatttttcaaagctaCACAT
GAATGAGCTCGATTCTACCATGGATAGCAATGCTTTCTCCTAACGCCATG
TCATGGGGGGAGAATACTTTCAGTACCCAATGCACAggctgcaaaattaa
agtctgaagacaaaatcacgcttttactcgaaatttttgtatgcttttta
catgacatttatttctgattcattcgaatttattgacactaataaagtta
tcagctgtaagttgtaaagcaagtaatatgggaataaaatcacgtgaact
ttttcgagtaatcacatgttttggcTGCATTGATAtgattttgcaacccg
tgtatttaACTTTTCCTTATGCTCTTCATAAGTTTAACTTTTGTCATTCT
AATTTTTGCTGCTAACTTTTGTTGCTTTAAGATACGTCGTTGAATCGTAC
AATATGTTTATGCTTCAACTTCATTATCATTATTACTACTACTAGTTTtt
agaaagaaatattttggtttttataGATATACAAGAAACGTGATACAAAA
ATCACacatagtttattcttattttgttgTTGTCAACTTGAccccttttt
ctatttttgcctCGATTTCGAAATCACAAGATTTAC
Run BLAST on NCBI

transcript from alignment at sc0000462:159933..169935+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023807 ID=TCONS_00023807|Name=TCONS_00023807|organism=Clytia hemisphaerica|type=transcript|length=10003bp|location=Sequence derived from alignment at sc0000462:159933..169935+ (Clytia hemisphaerica)
gttttagattaatttgttattttattacaaaatttagTTACAAACAGAAG
GTATTTTCAAGATGACGTCGATGGGAATGAGTTCCTTGTTCTCTTTTACT
TCTCCTGCTGTCAAACGACTGCTTGGTTGGAAACAAggagatgaagaaga
aaaatgggCAGAAAAAGCTATAGATTCACTTGTCAAGAAGTTGAAGAAAC
GAAAAGGTGCCTTGGAAGAATTAGAGAAAGCTTTGTCCAATCCAACTGGA
GAATCTAATTGTGTCACAATTCCAAGAAGTTTGGATGGTCGTTTACAAGT
TTCTCATCGTAAAGGTCTTCCTCATGTTATATATTGTCGTGTATGGAGAT
GGCCAGACTTACAAAGCCACCACGAATTAAAACCATTAGAATGTTGCGTT
TATGCCTTTAGTTTGAACAAAAAAGAAGTTTGTATCAATCCATACCATTA
CCGTCGTGTTGAAACACCAGGTAATTTATATCCTCCAAACTTGTCTGGCA
AAAACCATGCATTACTTGGGGCCTGATCCTGCTCTAGAGTCACAGAAGTA
GGGGCAAATCTGAAGGGTTTTTTGGTCTGGAAAAGCAAATTTTGTAAGTT
GGTCAATTTTAATATCTTTCTAGTGAGCTTTTACTAAGGTTTTTTCAAAG
AAGTTTGAAAACTACTGTACCTTTAGGTAATAATCCAAAACTTCCCTTGA
CAATCAGAAGCGCCGAGGTCACAAAAATTCAGATAGTGCTGTGGTACAGT
CATTTGAAAATAAGATAAAGCCAAGCTGGCATAATCTGTGAGTATCTTCC
ACACTGTTTTCTAGGCGGCCAACTTAATGCATTCTTCAGAATATTCTGTA
ATTTGTATTTTCTAaagaaatgttttcatttgattGTTCAGGGAAATTTT
GGGTGTTATAGGTAAGTACAACGGTAATACAGTTAGGTGTATTTGCTGAt
tgataaaataataaatttatttcCACTTCTCTGGATAACCTGATAGTAGA
TCAATTTCAACTTAATTTTTATCTTAACTGTAGTAAACAAAACATCCACA
AGCAGTGCTTAAAATAAAAGTACTCATACAATCATTTGATATGATTGAAG
TCCCAGAATGCTAAATAGCATAATAAATTGTGCATGTATTTATTAGCTTA
GTAGGCAAATACATTGTATAGGGATATCAATAAAGATGATTAGGAAAAGG
TCCATTTCAATACAGACACTGATACCACTTGGACGTATATAGGACACTTT
TCAAAGCTTCGTTAGTTGAACATGCACGCCTTTGGGTTAATCCTGAGTTT
TTTACCAAGATAATAAAATAACACAAATCATCTTCTACAGGGTGCGTCAT
AAAAAAGGTTTCTCTCTTTAATGTGAATTTTTTGCTGatcttaaaaattt
gaaagataaggcaaaaataaaaaattgtagtGTTCCTGGAAACTGGCCGG
gtgaaaaaatggaaattttctGACCCgtccgcagactatgggtttatctt
tatggttcatcataaagaaaatcaagttgaccgttcaagctatcaaacgt
tgTTTGtttagatattcccgcttgtaaatcaagttttgttcgttacTAGT
TGATGCATTAGTATTCAgagcttacttcatactgtttgtatatacataaa
agttatctttgaagtcctatttcaatgatcttaagttattaaatatattt
ttaaaagaaattttccagccGGCCACATGAGATGACAGCTTTTTTCTTTC
ACCCgtattccggaaacactacatttgtTTTGTTCTcctaaacttaaaat
tttgatgggctatttattaaatttggttcattagatcaaaatttatgctc
aattaaacaaaaaagttactttcaaaaacgttaaaatcgACCTATATATC
AAATTAATCAGAAGCATAATTGCATTGTACATTATTATTCTTTTTCTATg
gaaaggaaggttgaatttcaataaagaaaattcatcagaaaatgccataa
aattttgtaaattcatAAAACTAAATCAGTGtatatccagtctagaacca
aaaaacTACGGACATTTTTGATAAagataaattaaaatgatttttatgaa
gattttaaacccttacgAGCCTTCAGATTCAAAGTTTATGTTTTTCATTA
CTAAAAAATGCTCTTATTCATGTATATAAAGGCTATTGcaattgccaatt
ttaaaataaaaatttgtaaccctccaaacgatttggagtacattaaaaac
gagaccggtcttggtgcggtCGTGCTCGTGCTGCTTTCCGACTGGTTAAT
TGTGCatgtaaaagttaaaaaaagcgGCCAGAAGACCGTGCACAGTTCCG
TATGGTCCGTCCGTgcggacgatggtgcggtccccgCCGACTAAAGCGGA
CAATGGTGCAGTCCCCGCCGACTAAAgcggacgatggtgcggtccccgcc
gtttgtttatatttctttcgGTTGCCgtaagaatttcagcctcgagttca
acCAAGCAAAACAACAACTTGTTTCTGGACACACAAAAAGAACTTGCGTT
GTTTGATGTTCGATGCTCACATGTGAATTCTTGAGTTcaactttgtttat
tttgccgAACGTTATAAAATCGGCAAACAGTCATGTAAAAAACCATTCCG
CAAAATGTATGCTGTTTGTTATGATTTCTCGCCTGCCGGCAAACGTTTCG
AACGGCAAAATGTCCGCACCATGACCGCACTGAATACCGCACTTATTCAA
ATGGTGCTCTTTAGTGACCGATCGAGTGCGTTTGAATGGATTTTTAGAAA
cgatttttggatgatttctgGCCGATACAATGGTATCATTTTACCGCACG
GTAAATCGTTTCGCCGCTTTTTTGCCGCACATTTTATCGATCCGtccgca
ccaagaccggtctcatttttaatgtactccaaatcgcttggggggtcACA
TTTGATAGGTTGGTTTTCAACGTTTTcaagcactttctgaaagtaacttt
tttattcaattgagcataacttttgatctaaatgaatcaaatttaataaa
tgaccgatcaaaatttttaagtttatctttcttctgtccaatgaaataga
aatagttttttaatttttttctatttcgaccaaaaagtaattttaaagag
agaaacttttttgtgacaCACCTAGTAGATTATTTTCTATACAGAAAAAA
CATATATAAACTTTGAGCAAATTTGAATGGGAGGGCAGAAATGGTTTCAC
TGATATAACacagatttttaattttgaaactcTTTAGACTATATCCAACA
CTTGGTGTAAATGCTGAAATCAATCAGCATATACAGCAAATATTCATAAG
CTGATTAGATTAGGAGCTCTAGATTTTTCTATCCATCTCTATCCAAGTAC
CCTCAGGTACATCTTGTTTAAtatgatctttattttgattcaTTGGATTT
AGAAgttcaaaatttggtcaaaactcTTGAAAAATGAATGTAATTAGATT
GGTgcactaaaaaatattttttaccaaaattggtttatttggaaaagttt
ttcttttatattcgaCAAAAATTTAAGTTTGACAATATCTGACGATTTAG
GTTTTTAATGGTTTTCATAACCCTCACTAAGATTTTCTTAAGGTCCAAGA
AAGCAAACCCCTCTGATTTATATAATTATGTCTTGAATATTAGGTCAAGT
GTAATTAGCATGTGTTCGTTATATAGCAATTCACAGCCAATACAGAAGAA
CATGAtgtattaaaatcttttttgtttcagttCTTCCACCAGTATTGGTT
CCACGTCAAAGTGAATACCCACGAGGACCACTTCCATATCATATGCAACA
TGCTAATCACCAAGGAATGCCAAACAATGCAAACTTTCCTTCATTTTCAC
ATTCCAGATCACCTGGTGCTCCTGGTGGTAAGACTGGATTCCTTTTGTTT
CAGAAAAACTGTGTctttttttagccttttttttaattattttggcAAGG
CCATAAACTTGGGGACTACTAAAAAGTGGATTTTGGTGAACTTTGGTATA
CAAATCTTTAAGCTTGATGAATACAGTATCTGTTTAAGAAACATATTCTC
AATGCTCCTGAGCAATTTCATAGNGAATACAGTATCTGTTTAAGAAACAT
ATTCTCAATGCTCCTGAGCAATTTTATAATatgattcttttttctttctt
tttttcagaagAAGGACCACCTGGTTATAATGGAGTCATGTCTGAGGATG
GTGGTAGTCCACGGCCAGATCTCTCAATGGATGCTGATAACATCCCACCA
GgtacaatttttgaatttttttacaatgttttgaaaatgcaTAATATGCC
CATATAATACTTATTCATAGAGAAATCAAAGTTTGagattttgtttgatt
gtttgaagcAAAAACAGCTTGATTTCATAGCTTGAAAACATacatatttt
tcaattaaatGTATGTAAATTAAACAATCAAAAATACATTATTTAACAAC
TGCTGAATATCAAAGTTTAATGTTTGAATATCAGTATTAATACCTCATCA
GatcatttcatttcattcatcATTTGAAGGCCAAATTCTACATCATGTTT
ATAGCTTTTCTTGCAGCTCTAGCCTTTGCAgactttttgtctttttcaaa
gCTTCACATCTGCAAGATCTTCTATTCCAATCGTTAAAACAATTGATTCC
AAACAGtctaaaaaatgttgaaaatttactTTGACTGACTTTGGGAAGAA
ACTTTGCAGAAAGATACTTTTGCAAAAGttaattcaatgaaaaattatga
aaagcaACACGATAAAAAACACGACTAGTTTACTGTAAAACTACCCTCGA
AAAATTTGCTTGGATACGCTTTAGATTTAAAGCTGTGAAATAGTAAGCCT
GTTAGGACTGAGTTTCATAATGCTGATCTTTCTCTTTTAATGGGTTATGA
GCATCAGGCAGATTTTGAAGTCTTTGTTATGAACAGGCCAGGCATTGAAC
TGACAAACTTGTGCAATGTATGCACAGTGTCTATCATaaataacgcttat
aagcattataagcatatgaaggctcaggtTTGCAGAAATCctaagcatat
atgtcagcctgaaatatttttcaagttgtaattttttatctgtttaaaaa
ggtttggtagggGTCAAGTAAAACATTCCCCACAcggctacattccactg
ctcccaaaatctgaacaaacttttacaaaatttctgaaatttcactaaaa
acttggctcggggtgaatcataagcatataattAATAAGCATAAGCTATG
TCTAGATGCTTTGGGAACTttagcatacacgagcctgaccaaggggcaga
cCCTTGCTACAAAACATgcatcaattatatatgtgatAAGTATAAGTTTT
AACACCGATTTTCTATACAGATGTTACACCAATCACCTATAACGAACCAA
CAAACTGGTGCTCCATTGCATATTATGAATTGAATATCCGTGTTGGAGAA
CCATTCCAAGCTTCTGGAACCAGTCTTGTAATTGATGGGTTTACTGATCC
TAATACAAGCTCTGATCGATTTTGCCTTGGTGGTATGTCAAATGTTAACC
GTAATTCAACAATCGAAAATACACGTCGGCATATTAGTAAAGGAGTTCAT
TTGTATTACGTTGGTGGGGAAGTTTTTGCCGAATGTCTCAGTGATAGTGC
TATATTTGTTCAAAGTCGAAATTGTAATTACCATCATGGATTCCATCCCA
CAACAGTTTGTAAAATCCCACCTCAATgtactttgaaaattttcaataat
caaGAATTTGCTCAACTCTTGTCGCAAAGTGTTAACCATGGCTATGAAGC
TGTTTACGAACTTACTAAGCATTGTACTATTAGAATGAGTTTTGTTAAAG
GATGGGGTGCAGAATATCACCGTCAAGATGTAACAAGTACACCGTGCTGG
GTTGAAATTCATCTCCATGGTCCTTTACAATGGCTTGATAAAGTATTAAC
ACAAATGGGTTCTCCTGCAGGAATCATTGGGTCGGTATCATAAAATCAAA
TCAGGACTAAAATCATGTTGTCATAAAACTGTTTTGTTACTACCATGTTT
TAGTTGGTTTGTTTGATAGATATGGGTGGATCAGTCAGAGAAATACAGGT
TCAACATCCAAAATCGagaggaaaaatgaaattgctaTTTTTACTACATA
CTAATAAATCAGAACATGACGTAACGTTAGAAACTATGGAACTGCTAATA
AAATTAATAACACACAATTCTAAAGAATCCAGAGTAGTTATATATACAGC
AGAATCTATATTTTATAGCAGAAATTATAATTTTCCTAAACAAGCTTCTT
GTGTTCACAGTTTTCGAATATATGAAGGTCAACGAAATTTATTACAATGT
ACCGTATGAAGAAGTTGTTAACATTGATCAATCTAAAGTATGTTACAACA
AaggagattttttttaaaatactaatatttattatttttgtctCTCGTTA
GTAACCtgtgtaaaatatattatttttgcGAATGTTTGGTCCAATGCAAG
GTAATCTTGTAAGGATTCTAGAGAGATGAAATCGTTTTTCCCTTAATTTT
TCTAAGCAGTAAAAATAAACCAATTCTCTTTTTGCACGATTACAATTATG
TGTTTGGGCCTTTTACCTTCTTAATAATAATCCTCTATATTCTAATATCT
AATAttatacttttgttttcataatgttTTATATATACCTTGCAATATTC
TTTTAGCTACCCATTTTGTAATTATGTTTCAGTTGACAGTGCCAGAAACA
TTTATACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNATTTTCTATACAGATGTTACACCAATCACCTATAACGAA
CCAACAAACTGGTGCTCCATTGCATATTATGAATTGAATATCCGTGTTGG
AGAACCATTCCAAGCTTCTGGAACCAGTCTTGTAATTGATGGGTTTACTG
ATCCTAATACAAGCTCTGATCGATTTTGCCTTGGTGGTATGTCAAATGTT
AACCGTAATTCAACAATCGAAAATACACGCCGGCATATCAGTAAAGGAGT
TCATTTGTATTACGTTGGTGGGGAAGTTTTTGCTGAATGTCTCAGTGATA
GTGCTATATTTGTTCAAAGTCGAAATTGTAATTACCATCATGGATTCCAT
CCCACAACAGTTTGTAAAATCCCACCTCAATgtactttgaaaattttcaa
taatcaaGAATTTGCTCAACTCTTATCGCAAAGTGTTAACCATGGCTATG
AAGCTGTTTACGAACTTACTAAGCATTGTACTATTAGAATGAGTTTTGTT
AAAGGATGGGGTGCAGAATATCACCGTCAAGATGTAACAAGTACACCGTG
CTGGGTTGAAATTCATCTCCATGGTCCTTTACAATGGCTTGATAAAGTAT
TAACACAAATGGGTTCTCCTGCAGGAATCATTGGGTCGGTATCATAAAAT
CAAATCAGGACTAAAATCATGTTGTCATAAAACTGTTTTGTTACTACCAT
GTTTTAGTTGGTTTGTTTGATAGATATGGGTGGATCAGTCAGAGAAATAC
AGGTTCAACATCCAAAATCGagaggaaaaatgaaattgctaTTTTTACTA
CATACTAATAAATCAGAACATGACGTAACGTTAGAAACTATGGAACTGCT
AATAAAATTAATAACACACAATTCTAAAGAATCCAGAGTAGTTATATATA
CAGCAGAATCTATATTTTATAGCAGAAATTATAATTTTCCTAAACAAGCT
TCTTGTGTTCACAGTTTTCGAATATATGAAGGTCAACGAAATTTATTACA
ATGTACCGTATGAAGAAGTTGTTAACATTGATCAATCTAAAGTATGTTAC
AACAAaggagattttttttaaaatactaatatttattatttttgtctCTC
GTTAGTAACCtgtgtaaaatatattatttttgcGAATGTTTGGTCCAATG
CAAGGTAATCTTGTAAGGATTCTAGAGAGATGAAATCGTTTTTCCCTTAA
TTTTTCTAAGCAGTAAAAATAAACCAATTCTCTTTTTGCACGATTACAAT
TATGTGTTTGGGCCTTTTACCTTTTTAATAATAATCCTCTATATTCTAAT
ATCTAATAttatacttttgttttcataatgttTTATATATACCTTGCAAT
ATTCTTTTAGCTACCCATTTTGTAATTATGTTTCAGTTGACAGTGCCAGA
AACATTTATACAAAAATGAACGCTAATGGAAGTGTTTTAAAGGGTATGCT
ACTTTTTTCAGTCAAGCTAGTACAGTTTCTAATGTCATTTTTGTCTTGTT
TACGTGTTATGCTTCTCATGTTTTGTCTCGATTATTCAGTCATGAAAGTA
AGCTCTTTAGCTTGAACAAGTTTTCCCATATTTCAGCGTCCAACGTTCTG
tttatttagcaaaaaaattactttttttaaattgtaaatttcatttgtag
attttttttgacatagacagtattttttttgtttacgcTGCTAGCTTCTT
ATATGATTTATACGCGCTTTGCGATTTTTGACATCCGTTCGACTTAGTAC
TTTTTAGTTTTCGATTCAACTTTTTGACTGAATCAGgtaattgattgttt
ttttcaataattcttGATGCCCATCTTTGTACGGAAAGACCCGTCAAAAA
CTGATTACCTACAAGCTTTTGGAATATAACcggtgtttttcatttgtatc
CATACAAAAGATAAGGgcttgaatttcaaaatatagtACCTTCTCAACCC
GGAAAACTAATTAGGGCAAGTTTTGTCAATGATCTGTTCGTagcatttat
ttttcaaagctaCACATGAATGAGCTCGATTCTACCATGGATAGCAATGC
TTTCTCCTAACGCCATGTCATGGGGGGAGAATACTTTCAGTACCCAATGC
ACAggctgcaaaattaaagtctgaagacaaaatcacgcttttactcgaaa
tttttgtatgctttttacatgacatttatttctgattcattcgaatttat
tgacactaataaagttatcagctgtaagttgtaaagcaagtaatatggga
ataaaatcacgtgaactttttcgagtaatcacatgttttggcTGCATTGA
TAtgattttgcaacccgtgtatttaACTTTTCCTTATGCTCTTCATAAGT
TTAACTTTTGTCATTCTAATTTTTGCTGCTAACTTTTGTTGCTTTAAGAT
ACGTCGTTGAATCGTACAATATGTTTATGCTTCAACTTCATTATCATTAT
TACTACTACTAGTTTttagaaagaaatattttggtttttataGATATACA
AGAAACGTGATACAAAAATCACacatagtttattcttattttgttgTTGT
CAACTTGAcccctttttctatttttgcctCGATTTCGAAATCACAAGATT
TAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013374XLOC_013374Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023807-exon-sc0000462-1491911889:159933..160402TCONS_00023807-exon-sc0000462-1491911889:159933..160402Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1510915933:159933..160402TCONS_00023807-exon-sc0000462-1510915933:159933..160402Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1575043694:159933..160402TCONS_00023807-exon-sc0000462-1575043694:159933..160402Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1491911889:163713..163859TCONS_00023807-exon-sc0000462-1491911889:163713..163859Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1510915933:163713..163859TCONS_00023807-exon-sc0000462-1510915933:163713..163859Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1575043694:163713..163859TCONS_00023807-exon-sc0000462-1575043694:163713..163859Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1491911889:164144..164233TCONS_00023807-exon-sc0000462-1491911889:164144..164233Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1510915933:164144..164233TCONS_00023807-exon-sc0000462-1510915933:164144..164233Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1575043694:164144..164233TCONS_00023807-exon-sc0000462-1575043694:164144..164233Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1491911889:165353..165368TCONS_00023807-exon-sc0000462-1491911889:165353..165368Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1510915933:165353..165368TCONS_00023807-exon-sc0000462-1510915933:165353..165368Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1575043694:165353..165368TCONS_00023807-exon-sc0000462-1575043694:165353..165368Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1491911889:167373..169935TCONS_00023807-exon-sc0000462-1491911889:167373..169935Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1510915933:167373..169935TCONS_00023807-exon-sc0000462-1510915933:167373..169935Clytia hemisphaericaexon
TCONS_00023807-exon-sc0000462-1575043694:167373..169935TCONS_00023807-exon-sc0000462-1575043694:167373..169935Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000462supercontigsc0000462:159933..169935 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.571247	0.878548	0.622076	1.16799	0.156889	0.000626827	1.53771	0.00152696	0.174622	0.63485	0.000692808	2.54907	0.623235	0.0090872	0.28849	0.0205693	1.67255	0.414132	1.95191	0.278262	9.27307	13.7875	5.0605	3.88312	0.00182083	0.167292	14.6617	4.40752	3.81793	9.65025
Blast
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BLAST of TCONS_00023807 vs. Swiss-Prot (Human)
Match: SMAD1 (Mothers against decapentaplegic homolog 1 OS=Homo sapiens GN=SMAD1 PE=1 SV=1)

HSP 1 Score: 592.423 bits (1526), Expect = 0.000e+0
Identity = 321/466 (68.88%), Postives = 355/466 (76.18%), Query Frame = 2 
Query:   71 MGMSSLFSFTSPAVKRLLGWKQGDEEEKWAEKAIDSLVKKLKKRKGALEELEKALSNPTGESNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCVYAFSLNKKEVCINPYHYRRVETXXXXXXXXXRQSEY-PRGPLPYHMQH--ANHQGMPNNANFPS---------FSHSRS---PGAPGEG------------------------PPGY---NGVMSEDGGSPRPDLSMDADNIPP-----DVTPITYNEPTNWCSIAYYELNIRVGEPFQASGTSLVIDGFTDPNTSSDRFCLGGMSNVNRNSTIENTRRHISKGVHLYYVGGEVFAECLSDSAIFVQSRNCNYHHGFHPTTVCKIPPQCTLKIFNNQEFAQLLSQSVNHGYEAVYELTKHCTIRMSFVKGWGAEYHRQDVTSTPCWVEIHLHGPLQWLDKVLTQMGSPAGIIGSVS 1327
            M ++SLFSFTSPAVKRLLGWKQGDEEEKWAEKA+D+LVKKLKK+KGA+EELEKALS P   SNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECC + F   +KEVCINPYHY+RVE+PVLPPVLVPR SEY P+  L    ++   N   MP NA FP          F HS +   P +PG                          PP Y      M++DG  P  D +M A  +P      DV  + Y EP +WCSI YYELN RVGE F AS TS+++DGFTDP+ + +RFCLG +SNVNRNSTIENTRRHI KGVHLYYVGGEV+AECLSDS+IFVQSRNCNYHHGFHPTTVCKIP  C+LKIFNNQEFAQLL+QSVNHG+E VYELTK CTIRMSFVKGWGAEYHRQDVTSTPCW+EIHLHGPLQWLDKVLTQMGSP   I SVS
Sbjct:    1 MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDGSQPM-DTNMMAPPLPSEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 465
The following BLAST results are available for this feature:
BLAST of TCONS_00023807 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SMAD10.000e+068.88Mothers against decapentaplegic homolog 1 OS=Homo ... [more]
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