TCONS_00023800 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00023800
Unique Name	TCONS_00023800
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2392

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000462:110132..115402+
coding sequence from alignment at sc0000462:110132..115402+

transcript sequence

>TCONS_00023800 ID=TCONS_00023800|Name=TCONS_00023800|organism=Clytia hemisphaerica|type=transcript|length=2392bp
ATAGAttattataaaaagtaaaaaaataaagaacaaacaagaaaaatgaa
atgaagATGGTAACACCAATATTGACCATACTGGTATACTTCCTCATCaa
caatcaaccaatcaaatgcAATGATGAAGAAAAATCTTCAACATATTCAT
CAAAGAAACCAAATTTCGTGATTCTTTACATCGAGCATTTGAATGAGATA
TTGCTAGATTTGGAAGGTTCAACAGATGAATTACCAAACCTTCAGAAGTT
TGTCAATTTTGACGGTAACCGGTTTCGCAATGTTTATGGTGAAGCGTCTT
CGGCATCAACTTTTGCAAGCTTATTTACTGGTAAACCAGCAGTGAACACT
GGTATCATTCGTGGTAAACTTCTTCCGTTTACCAGTTTCCCGAGTCTTGC
AAGCAGTGGTGGGCTGAGTACTAAAGAACCAAACCTCGCTTCCACACTGA
AGAAAGAAGGATACTCAACAGCTTTCTATGGATACTGGAAATTAGGGCTT
GGTCCTAAAGGTATAAACAACCCTTTACAACATGGTTTTGACACATGGAT
GGGTGTGGCTTACCCACATAACGAATGGTGTGAGGAACAAAAGAGTGTCA
TTACAAACCAAGAATCACTTTTAAACCATCCCTACCTCAAGTTATTCTAC
CACACCTCATTCTTATGGTTACTGTTATTCCTATTCTTGACAATGCTGGT
CTGGTTTAAAGTAGTGTCTGTATACCTATACATGAATTTACTGGTTTATA
CTGTAAGCACAGCTTTGGCTTTCTATATCTTACTTCACCTGTTTATAGTG
CAGCGGTCAGCTTCGTGTGTTATGTACAGGGAGAACGAGATTCGTTTACA
ACCTTACGACATGACAAATCTAACACTGTATTTCACAACAGGGgcttcat
tatttttgaaacaagtAAACGAACCTTTTTTAATGGTTGTCAACTATTTG
AAAATGTTACCACCGTACGTTCATTCGCCTTATTTTTCAAGCGAGCGAAC
GCGGTCGCCTAGATATTATGCTCTGCAAGAGTTGGATTGGAGTGTAGGCT
ATGTCATAGAGAAACTTGAGGAGCAAGATATTTTGGATGACACGATAGTG
ATTATAACAGGTGGTAATTCATGTAATTGGAAACCAACTTTGACGGATGC
ATATCAGAAAACGTCGACAGGTTTTGAACATGTTGAAGtgaaaataaatt
gGGATGATTGTTTTCGAATCCCGTTATGGATAAAAGACATTAAACAAACG
AAAACCAGTGGGGTTCAACCATCCGAAGATATCGACGAGATCTTGCCTAT
AACATCGCTATATAATACCATATTAGATGCAGCTCACGTGACCAATATTA
ATAAGAATAACAACAAGAGTTTCTTGAAGATGATCAGAAAAAGGGATGAG
TCGTGCCCAGTCCCAAAACCTTCTTTCTATGTAGATTTAATGACAAGGAG
TGCTTTAGAACAATTCTCATTTACCGATGCTAAAGATTACAATAATACAG
ACGTTTTTAGTGTGAATATGACTGGCTTACGTGATCAAATTGATGAGGTC
ATTATGAACCAATCAGTGAAGACTTTGTTTCATTATTACAACGTTGAAAA
GCCTGTAATGTTGACTTTCGAAGAAGGATACAAAATCATTTATTATTATT
TAGATGgaTCAAAATCATTACGAAAACTATCTGAGCCAATCATAGTGGAT
ACTGTCCCAAAAAGATTCCCTAGCAACCAATCAGAGCTCGCCACACATCT
TAACAATATACTTATTAAATCAAGTGACATGTTAAAAGCGCATTTTCAAA
CGAGACAGAATTCAAATTTATGGTCTTCACAATTTGAAATGCCGGTTTAT
CCGTGGTTATTACCGTGTCATAATTTCCCTTATTGTCGTCGTGTTTGGGA
CGCGAATGACGATTTTCGAGATTTATTCCCTTTTGGGAAACCTCGAAGCG
AGAATTTAGATACTTAGCTAATATTGTAATATGCATGTAAATAAGTCATT
TTctgacaaaatttctttgatattgtTTTCTTAGACAACCGCAATGTCAA
AAATCTCCGACATTCTGCTCCATAATCAAAATATCTAATTTCTTTTTGGG
GTAAGTGTTTCTCGAAGACCTTAAACTGAAAATTGGTCTATTTGACCATT
TTGATGTTTTATTCTCTGAAATACTATAAAACAGCTAGAGAGCCTAAACC
AAAGTATGTTCCAAAAAACTTGGTTTTCTGTAAATTTAGATAAAGTTTTT
TACATTAAGAATTTTTAGTGGatgattttgaactttttagatCTTTCAAA
AAGAGAGTATATTTTTCTATTAGGCCAAAatctttgaatatatttttccc
TTAACTTTGAAATTCAAACGTTGATCTCAGGATTGTAACTTA

Run BLAST on NCBI

protein sequence of TCONS_00023800-protein

>TCONS_00023800-protein ID=TCONS_00023800-protein|Name=TCONS_00023800-protein|organism=Clytia hemisphaerica|type=polypeptide|length=638bp
MKMVTPILTILVYFLINNQPIKCNDEEKSSTYSSKKPNFVILYIEHLNEI
LLDLEGSTDELPNLQKFVNFDGNRFRNVYGEASSASTFASLFTGKPAVNT
GIIRGKLLPFTSFPSLASSGGLSTKEPNLASTLKKEGYSTAFYGYWKLGL
GPKGINNPLQHGFDTWMGVAYPHNEWCEEQKSVITNQESLLNHPYLKLFY
HTSFLWLLLFLFLTMLVWFKVVSVYLYMNLLVYTVSTALAFYILLHLFIV
QRSASCVMYRENEIRLQPYDMTNLTLYFTTGASLFLKQVNEPFLMVVNYL
KMLPPYVHSPYFSSERTRSPRYYALQELDWSVGYVIEKLEEQDILDDTIV
IITGGNSCNWKPTLTDAYQKTSTGFEHVEVKINWDDCFRIPLWIKDIKQT
KTSGVQPSEDIDEILPITSLYNTILDAAHVTNINKNNNKSFLKMIRKRDE
SCPVPKPSFYVDLMTRSALEQFSFTDAKDYNNTDVFSVNMTGLRDQIDEV
IMNQSVKTLFHYYNVEKPVMLTFEEGYKIIYYYLDGSKSLRKLSEPIIVD
TVPKRFPSNQSELATHLNNILIKSSDMLKAHFQTRQNSNLWSSQFEMPVY
PWLLPCHNFPYCRRVWDANDDFRDLFPFGKPRSENLDT

Run BLAST on NCBI

transcript from alignment at sc0000462:110132..115402+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00023800 ID=TCONS_00023800|Name=TCONS_00023800|organism=Clytia hemisphaerica|type=transcript|length=5271bp|location=Sequence derived from alignment at sc0000462:110132..115402+ (Clytia hemisphaerica)
ATAGAttattataaaaagtaaaaaaataaagaacaaacaagaaaaatgaa
atgaagATGGTAACACCAATATTGACCATACTGGTATACTTCCTCATCaa
caatcaaccaatcaaatgcAATGATGAAGAAAAATCTTCAACATATTCAT
CAAAGAAACCAAATTTCGTGATTCTTTACATCGAGCATTTGAATGAGATA
TTGCTAGATTTGGAAGGTTCAACAGATGAATTACCAAACCTTCAGAAGTT
TGTCAATTTTGACGGTAACCGGTTTCGCAATGTTTATGGTGAAGCGTCTT
CGGCATCAACTTTTGCAAGCTTATTTACTGGTGAGTGAAAATTAACCTTC
TTTATTCACCGTCATAATATTTgacacaaaaggggaattccctcaaaatt
ttaaaacttgaaGTGATTTTTAAGGGCATTAAGTTACGGTTGGAAAGTAG
ACTCTGGGttttaaaatccaatggaacaAAGGGTAAGTACGGAAATCGAA
GTTCCCGCCCGaattttaaattcttaaaaaactttaaaatattgTCAATG
TATTTTGACGATGATTGTAGAAGTCAATGCTCCGATTGCTACACCACTCT
TGCGGTAATTAGTTTAATTAGGCTGACACGTTCTCCACATTGGAGCCAGT
GGGAGCAACAAAAATTATACAATTTTAAAGCAATTAGACTTCATAcaaca
atcatggacaaaaggtttgtagacttttAGGGAGAGGGGAAAGTAGGgca
ttttgagagatttttctcaatttttgaaaagtctacaaccttttgtccat
gattgaaGCCGGCTTCCTTAAGATTAATAGCTTTCTTCGATTTTATTCGA
CCAGATGATAAGATCAGGTTGTTTTTACTATAATACTGTTCAGGGTTTCG
GTAGCATGGGAAAATCTATCCCATGGTACCGAAACCCTGAAAGCAGACGG
GTAATCTATATCAATCTAATTACCAGTAGTaagtttattaaaaaaaggAA
TATAAATAGCAAACAAAGTAAATAAAGCAACAAGCCGAGGTAACAATCAT
AATCGTTCGAATTACTAAAAGTTCTACTGACATAGCCTCTTAAAATAGAT
GAGGTGACTCGACGTTTTCTAATGACAGCTAAGTTACATACTGGCCAATC
TCGCCAGCTGACATACGAAtaagaaaaagatttcaggaatCTTGGATTTA
CTAACTGATTTCTCACAAGTCTCTAGATAGACATTTTGTGCAGGATCCCA
CAGTTAGATTTCTCTTCAACTGCTTCACAAAACGAACGCATTTAGCCTAC
TGACCATTAAGATAATTTCCACGTTCTATCTCGATTCCAGGTAAACCAGC
AGTGAACACTGGTATCATTCGTGGTAAACTTCTTCCGTTTACCAGTTTCC
CGAGTCTTGCAAGCAGTGGTGGGCTGAGTACTAAAGAACCAAACCTCGCT
TCCACACTGAAGAAAGAAGGATACTCAACAGCTTTCTATGGATACTGGAA
ATTAGGGCTTGGTCCTAAAGGTAAAAAGTTTgacaattttgtgaaaaatt
caGGGACATTGATGAATGAGTCTGAATATCAAAATCTCCTCCACACCTTG
CCTTATGTTTTCTTTATgccatttttgtgttttgtttgacCTATACAGCA
CTctaatactttctttttcccATACAAGCAAATTCGCAAAACATTTGGAA
TCGATGCCCTCATAGCCCCAAAAATCTGGAATTCAACACACTACCATCTC
TCACACAAACATGTCAGTATTCCCACCCATGCTCTCATACTTTCTTTTCC
ATGCAAGCCAATTTACACACATACTTTATCCCCTCAAATGTTTTTATCCA
TAGGTATAAACAACCCTTTACAACATGGTTTTGACACATGGATGGGTGTG
GCTTACCCACATAACGAATGGTGTGAGGAACAAAAGAGTGTCATTACAAA
CCAAGAATCACTTTTAAACCATCCCTACCTCAAGTTATTCTACCACACCT
CATTCTTATGGTTACTGTTATTCCTATTCTTGACAATGCTGGTCTGGTTT
AAAGTAGTGTCTGTATACCTATACATGAATTTACTGGTTTATACTGTAAG
CACAGCTTTGGCTTTCTATATCTTACTTCACCTGTTTATAGTGCAGCGGT
CAGCTTCGTGTGTTATGTACAGGGAGAACGAGATTCGTTTACAACCTTAC
GACATGACAAATCTAACACTGTATTTCACAACAGGGgcttcattattttt
gaaacaagtAAACGAACCTTTTTTAATGGTTGTCAACTATTTGAAAATGT
TACCACCGTACGTTCATTCGCCTTATTTTTCAAGCGAGCGAACGCGGTCG
CCTAGATATTATGCTCTGCAAGAGTTGGATTGGAGTGTAGGCTATGTCAT
AGAGAAACTTGAGGAGCAAGATATTTTGGATGACACGATAGTGATTATAA
CAGGTGGTAATTCATGTAATTGGAAACCAACTTTGACGGATGCATATCAG
AAAACGTCGACAGGTTTTGAACATGTTGAAGGTTAGTATCAACTTAAAGA
GGTGAAGTTAAGTAtttttgatattcatgacgtaatcatagtgggaaccc
ccccccctaactttaggggggggttggaggttttcagaaaaatttaagca
gGTGGGGGTTAGCCTGCTCACAAATCTTGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTGGGGGTTG
GGTCAGtagcatttttcaggtgggggttaccctatgcaggtgggggtgac
tttattcaggtgggggttggaggggtgctGCCCACTATGGTAATCTTTCA
TACGGAAACACACGAAAAACACCGGGCGTCTGCCACTTGCTTccttgttt
aaattcaaaactggtggcaaacgcccgatgtttttcgggtgtttccgtat
aaaaggttacgtcatgaatatcaagcaTGCTGCTAAAGTCACGACGATGA
ATATGAAATTTAATAGACTAATATATGTTACGAGACGTTAGCATGGGTCA
AACTCGAGTCTGTTACATTTTCCGCGCTTGTCGTTGTTGTTCAACCGGTA
ACCTGACTAATAGATTATCATGTAGAAAAATCCCTTTCAATTTAACGCAC
TACCGTacttacctataacaatccaaaCGCTCCCTTAACAATCTAAAGcg
ccaaaacctaaaaaattttgatatttgctTCGGTATAGCCACTTTTTGTG
CGATTTTTGtgcttttgattgttaagggaGCGTTTGGATTATTTTTAAAA
CTAGAAGAAAGAATGCTTCCAGTCAGATTTTGGAAAAgcgtgtaaaatat
tttttaattgcattatttcctttttagtgaaaataaattgGGATGATTGT
TTTCGAATCCCGTTATGGATAAAAGACATTAAACAAACGAAAACCAGTGG
GGTTCAACCATCCGAAGATATCGACGAGATCTTGCCTATAACATCGCTAT
ATAATACCATATTAGATGCAGCTCACGTGACCAATATTAATAAGAATAAC
AACAAGAGTTTCTTGAAGATGATCAGAAAAAGGGATGAGTCGTGCCCAGT
CCCAAAACCTTCTTTCTATGTAGATTTAATGACAAGGAGTGCTTTAGAAC
AATTCTCATTTACCGATGCTAAAGATTACAATAATACAGACGTTTTTAGT
GTGAATATGACTGGCTTACGTGATCAAATTGATGAGGTCATTATGAACCA
ATCAGTGAAGACTTTGTTTCATTATTACAACGTTGAAAAGCCTGTAATGT
TGACTTTCGAAGAAGGATACAAAATCATTTATTATTATTTAGATGGTGAG
ATTTGATTGATTTcctaatacacctttttacgGTTAGCTActtcgtataa
aaagtcaccaaaattttgagtaaacaaaccatctcattggctaaaagcaa
aaacaaaagcaaaaaaatgtccAGAGTAAGAGCACAGAAAGCACATTGTC
CTCTTACTCTGcactttttttgtttatgtttttgcctttagttgtttatg
tttttgtttatgtttgccCCGACTGGTCTCTATTGTTTTGTTCCTCAAAT
GTCTTTTGTTAGATAAGaagctaaaaattttttttttttttttttttttg
ccccgACTGGTCTCTATTGTTTTGTTCCTCAAATGTCTTTTGTTAGATAA
GaagctaaaaattttttttttttttttttttgcaggaTCAAAATCATTAC
GAAAACTATCTGAGCCAATCATAGTGGATACTGTCCCAAAAAGATTCCCT
AGCAACCAATCAGAGCTCGCCACACATCTTAACAATATACTTATTAAATC
AAGTGACATGTTAAAAGCGCATTTTCAAACGAGACAGAATTCAAATTTAT
GGTCTTCACAATTTGAAATGCCGGTTTATCCGTGGTTATTACCGTGTCAT
AATTTCCCTTATTGTCGTCGTGTTTGGGACGCGAATGACGATTTTCGAGA
TTTATTCCCTTTTGGGAAACCTCGAAGCGAGAATTTAGATACTTAGCTAA
TATTGTAATATGCATGTAAATAAGTCATTTTctgacaaaatttctttgat
attgtTTTCTTAGACAACCGCAATGTCAAAAATCTCCGACATTCTGCTCC
ATAATCAAAATATCTAATTTCTTTTTGGGGTAAGTGTTTCTCGAAGACCT
TAAACTGAAAATTGGTCTATTTGACCATTTTGATGTTTTATTCTCTGAAA
TACTATAAAACAGCTAGAGAGCCTAAACCAAAGTATGTTCCAAAAAACTT
GGTTTTCTGTAAATTTAGATAAAGTTTTTTACATTAAGAATTTTTAGTGG
atgattttgaactttttagatCTTTCAAAAAGAGAGTATATTTTTCTATT
AGGCCAAAatctttgaatatatttttcccTTAACTTTGAAATTCAAACGT
TGATCTCAGGATTGTAACTTA

Coding sequence (CDS) from alignment at sc0000462:110132..115402+

>TCONS_00023800 ID=TCONS_00023800|Name=TCONS_00023800|organism=Clytia hemisphaerica|type=CDS|length=9585bp|location=Sequence derived from alignment at sc0000462:110132..115402+ (Clytia hemisphaerica)
atgaagATGGTAACACCAATATTGACCATACTGGTATACTTCCTCATCaa
caatcaaccaatcaaatgcAATGATGAAGAAAAATCTTCAACATATTCAT
CAAAGAAACCAAATTTCGTGATTCTTTACATCGAGCATTTGAATGAGATA
TTGCTAGATTTGGAAGGTTCAACAGATGAATTACCAAACCTTCAGAAGTT
TGTCAATTTTGACGGTAACCGGTTTCGCAATGTTTATGGTGAAGCGTCTT
CGGCATCAACTTTTGCAAGCTTATTTACTGGTAAACCAGCAGTGAACACT
GGTATCATTCGTGGTAAACTTCTTCCGTTTACCAGTTTCCCGAGTCTTGC
AAGCAGTGGTGGGCTGAGTACTAAAGAACCAAACCTCGCTTCCACACTGA
AGAAAGAAGGATACTCAACAGCTTTCTATGGATACTGGAAATTAGGGCTT
GGTCCTAAAGGTATAAACAACCCTTTACAACATGGTTTTGACACATGGAT
GGGTGTGGCTTACCCACATAACGAATGGTGTGAGGAACAAAAGAGTGTCA
TTACAAACCAAGAATCACTTTTAAACCATCCCTACCTCAAGTTATTCTAC
CACACCTCATTCTTATGGTTACTGTTATTCCTATTCTTGACAATGCTGGT
CTGGTTTAAAGTAGTGTCTGTATACCTATACATGAATTTACTGGTTTATA
CTGTAAGCACAGCTTTGGCTTTCTATATCTTACTTCACCTGTTTATAGTG
CAGCGGTCAGCTTCGTGTGTTATGTACAGGGAGAACGAGATTCGTTTACA
ACCTTACGACATGACAAATCTAACACTGTATTTCACAACAGGGgcttcat
tatttttgaaacaagtAAACGAACCTTTTTTAATGGTTGTCAACTATTTG
AAAATGTTACCACCGTACGTTCATTCGCCTTATTTTTCAAGCGAGCGAAC
GCGGTCGCCTAGATATTATGCTCTGCAAGAGTTGGATTGGAGTGTAGGCT
ATGTCATAGAGAAACTTGAGGAGCAAGATATTTTGGATGACACGATAGTG
ATTATAACAGGTGGTAATTCATGTAATTGGAAACCAACTTTGACGGATGC
ATATCAGAAAACGTCGACAGGTTTTGAACATGTTGAAGtgaaaataaatt
gGGATGATTGTTTTCGAATCCCGTTATGGATAAAAGACATTAAACAAACG
AAAACCAGTGGGGTTCAACCATCCGAAGATATCGACGAGATCTTGCCTAT
AACATCGCTATATAATACCATATTAGATGCAGCTCACGTGACCAATATTA
ATAAGAATAACAACAAGAGTTTCTTGAAGATGATCAGAAAAAGGGATGAG
TCGTGCCCAGTCCCAAAACCTTCTTTCTATGTAGATTTAATGACAAGGAG
TGCTTTAGAACAATTCTCATTTACCGATGCTAAAGATTACAATAATACAG
ACGTTTTTAGTGTGAATATGACTGGCTTACGTGATCAAATTGATGAGGTC
ATTATGAACCAATCAGTGAAGACTTTGTTTCATTATTACAACGTTGAAAA
GCCTGTAATGTTGACTTTCGAAGAAGGATACAAAATCATTTATTATTATT
TAGATGgaTCAAAATCATTACGAAAACTATCTGAGCCAATCATAGTGGAT
ACTGTCCCAAAAAGATTCCCTAGCAACCAATCAGAGCTCGCCACACATCT
TAACAATATACTTATTAAATCAAGTGACATGTTAAAAGCGCATTTTCAAA
CGAGACAGAATTCAAATTTATGGTCTTCACAATTTGAAATGCCGGTTTAT
CCGTGGTTATTACCGTGTCATAATTTCCCTTATTGTCGTCGTGTTTGGGA
CGCGAATGACGATTTTCGAGATTTATTCCCTTTTGGGAAACCTCGAAGCG
AGAATTTAGATACTTAGatgaagATGGTAACACCAATATTGACCATACTG
GTATACTTCCTCATCaacaatcaaccaatcaaatgcAATGATGAAGAAAA
ATCTTCAACATATTCATCAAAGAAACCAAATTTCGTGATTCTTTACATCG
AGCATTTGAATGAGATATTGCTAGATTTGGAAGGTTCAACAGATGAATTA
CCAAACCTTCAGAAGTTTGTCAATTTTGACGGTAACCGGTTTCGCAATGT
TTATGGTGAAGCGTCTTCGGCATCAACTTTTGCAAGCTTATTTACTGGTA
AACCAGCAGTGAACACTGGTATCATTCGTGGTAAACTTCTTCCGTTTACC
AGTTTCCCGAGTCTTGCAAGCAGTGGTGGGCTGAGTACTAAAGAACCAAA
CCTCGCTTCCACACTGAAGAAAGAAGGATACTCAACAGCTTTCTATGGAT
ACTGGAAATTAGGGCTTGGTCCTAAAGGTATAAACAACCCTTTACAACAT
GGTTTTGACACATGGATGGGTGTGGCTTACCCACATAACGAATGGTGTGA
GGAACAAAAGAGTGTCATTACAAACCAAGAATCACTTTTAAACCATCCCT
ACCTCAAGTTATTCTACCACACCTCATTCTTATGGTTACTGTTATTCCTA
TTCTTGACAATGCTGGTCTGGTTTAAAGTAGTGTCTGTATACCTATACAT
GAATTTACTGGTTTATACTGTAAGCACAGCTTTGGCTTTCTATATCTTAC
TTCACCTGTTTATAGTGCAGCGGTCAGCTTCGTGTGTTATGTACAGGGAG
AACGAGATTCGTTTACAACCTTACGACATGACAAATCTAACACTGTATTT
CACAACAGGGgcttcattatttttgaaacaagtAAACGAACCTTTTTTAA
TGGTTGTCAACTATTTGAAAATGTTACCACCGTACGTTCATTCGCCTTAT
TTTTCAAGCGAGCGAACGCGGTCGCCTAGATATTATGCTCTGCAAGAGTT
GGATTGGAGTGTAGGCTATGTCATAGAGAAACTTGAGGAGCAAGATATTT
TGGATGACACGATAGTGATTATAACAGGTGGTAATTCATGTAATTGGAAA
CCAACTTTGACGGATGCATATCAGAAAACGTCGACAGGTTTTGAACATGT
TGAAGtgaaaataaattgGGATGATTGTTTTCGAATCCCGTTATGGATAA
AAGACATTAAACAAACGAAAACCAGTGGGGTTCAACCATCCGAAGATATC
GACGAGATCTTGCCTATAACATCGCTATATAATACCATATTAGATGCAGC
TCACGTGACCAATATTAATAAGAATAACAACAAGAGTTTCTTGAAGATGA
TCAGAAAAAGGGATGAGTCGTGCCCAGTCCCAAAACCTTCTTTCTATGTA
GATTTAATGACAAGGAGTGCTTTAGAACAATTCTCATTTACCGATGCTAA
AGATTACAATAATACAGACGTTTTTAGTGTGAATATGACTGGCTTACGTG
ATCAAATTGATGAGGTCATTATGAACCAATCAGTGAAGACTTTGTTTCAT
TATTACAACGTTGAAAAGCCTGTAATGTTGACTTTCGAAGAAGGATACAA
AATCATTTATTATTATTTAGATGgaTCAAAATCATTACGAAAACTATCTG
AGCCAATCATAGTGGATACTGTCCCAAAAAGATTCCCTAGCAACCAATCA
GAGCTCGCCACACATCTTAACAATATACTTATTAAATCAAGTGACATGTT
AAAAGCGCATTTTCAAACGAGACAGAATTCAAATTTATGGTCTTCACAAT
TTGAAATGCCGGTTTATCCGTGGTTATTACCGTGTCATAATTTCCCTTAT
TGTCGTCGTGTTTGGGACGCGAATGACGATTTTCGAGATTTATTCCCTTT
TGGGAAACCTCGAAGCGAGAATTTAGATACTTAGatgaagATGGTAACAC
CAATATTGACCATACTGGTATACTTCCTCATCaacaatcaaccaatcaaa
tgcAATGATGAAGAAAAATCTTCAACATATTCATCAAAGAAACCAAATTT
CGTGATTCTTTACATCGAGCATTTGAATGAGATATTGCTAGATTTGGAAG
GTTCAACAGATGAATTACCAAACCTTCAGAAGTTTGTCAATTTTGACGGT
AACCGGTTTCGCAATGTTTATGGTGAAGCGTCTTCGGCATCAACTTTTGC
AAGCTTATTTACTGGTAAACCAGCAGTGAACACTGGTATCATTCGTGGTA
AACTTCTTCCGTTTACCAGTTTCCCGAGTCTTGCAAGCAGTGGTGGGCTG
AGTACTAAAGAACCAAACCTCGCTTCCACACTGAAGAAAGAAGGATACTC
AACAGCTTTCTATGGATACTGGAAATTAGGGCTTGGTCCTAAAGGTATAA
ACAACCCTTTACAACATGGTTTTGACACATGGATGGGTGTGGCTTACCCA
CATAACGAATGGTGTGAGGAACAAAAGAGTGTCATTACAAACCAAGAATC
ACTTTTAAACCATCCCTACCTCAAGTTATTCTACCACACCTCATTCTTAT
GGTTACTGTTATTCCTATTCTTGACAATGCTGGTCTGGTTTAAAGTAGTG
TCTGTATACCTATACATGAATTTACTGGTTTATACTGTAAGCACAGCTTT
GGCTTTCTATATCTTACTTCACCTGTTTATAGTGCAGCGGTCAGCTTCGT
GTGTTATGTACAGGGAGAACGAGATTCGTTTACAACCTTACGACATGACA
AATCTAACACTGTATTTCACAACAGGGgcttcattatttttgaaacaagt
AAACGAACCTTTTTTAATGGTTGTCAACTATTTGAAAATGTTACCACCGT
ACGTTCATTCGCCTTATTTTTCAAGCGAGCGAACGCGGTCGCCTAGATAT
TATGCTCTGCAAGAGTTGGATTGGAGTGTAGGCTATGTCATAGAGAAACT
TGAGGAGCAAGATATTTTGGATGACACGATAGTGATTATAACAGGTGGTA
ATTCATGTAATTGGAAACCAACTTTGACGGATGCATATCAGAAAACGTCG
ACAGGTTTTGAACATGTTGAAGtgaaaataaattgGGATGATTGTTTTCG
AATCCCGTTATGGATAAAAGACATTAAACAAACGAAAACCAGTGGGGTTC
AACCATCCGAAGATATCGACGAGATCTTGCCTATAACATCGCTATATAAT
ACCATATTAGATGCAGCTCACGTGACCAATATTAATAAGAATAACAACAA
GAGTTTCTTGAAGATGATCAGAAAAAGGGATGAGTCGTGCCCAGTCCCAA
AACCTTCTTTCTATGTAGATTTAATGACAAGGAGTGCTTTAGAACAATTC
TCATTTACCGATGCTAAAGATTACAATAATACAGACGTTTTTAGTGTGAA
TATGACTGGCTTACGTGATCAAATTGATGAGGTCATTATGAACCAATCAG
TGAAGACTTTGTTTCATTATTACAACGTTGAAAAGCCTGTAATGTTGACT
TTCGAAGAAGGATACAAAATCATTTATTATTATTTAGATGgaTCAAAATC
ATTACGAAAACTATCTGAGCCAATCATAGTGGATACTGTCCCAAAAAGAT
TCCCTAGCAACCAATCAGAGCTCGCCACACATCTTAACAATATACTTATT
AAATCAAGTGACATGTTAAAAGCGCATTTTCAAACGAGACAGAATTCAAA
TTTATGGTCTTCACAATTTGAAATGCCGGTTTATCCGTGGTTATTACCGT
GTCATAATTTCCCTTATTGTCGTCGTGTTTGGGACGCGAATGACGATTTT
CGAGATTTATTCCCTTTTGGGAAACCTCGAAGCGAGAATTTAGATACTTA
GatgaagATGGTAACACCAATATTGACCATACTGGTATACTTCCTCATCa
acaatcaaccaatcaaatgcAATGATGAAGAAAAATCTTCAACATATTCA
TCAAAGAAACCAAATTTCGTGATTCTTTACATCGAGCATTTGAATGAGAT
ATTGCTAGATTTGGAAGGTTCAACAGATGAATTACCAAACCTTCAGAAGT
TTGTCAATTTTGACGGTAACCGGTTTCGCAATGTTTATGGTGAAGCGTCT
TCGGCATCAACTTTTGCAAGCTTATTTACTGGTAAACCAGCAGTGAACAC
TGGTATCATTCGTGGTAAACTTCTTCCGTTTACCAGTTTCCCGAGTCTTG
CAAGCAGTGGTGGGCTGAGTACTAAAGAACCAAACCTCGCTTCCACACTG
AAGAAAGAAGGATACTCAACAGCTTTCTATGGATACTGGAAATTAGGGCT
TGGTCCTAAAGGTATAAACAACCCTTTACAACATGGTTTTGACACATGGA
TGGGTGTGGCTTACCCACATAACGAATGGTGTGAGGAACAAAAGAGTGTC
ATTACAAACCAAGAATCACTTTTAAACCATCCCTACCTCAAGTTATTCTA
CCACACCTCATTCTTATGGTTACTGTTATTCCTATTCTTGACAATGCTGG
TCTGGTTTAAAGTAGTGTCTGTATACCTATACATGAATTTACTGGTTTAT
ACTGTAAGCACAGCTTTGGCTTTCTATATCTTACTTCACCTGTTTATAGT
GCAGCGGTCAGCTTCGTGTGTTATGTACAGGGAGAACGAGATTCGTTTAC
AACCTTACGACATGACAAATCTAACACTGTATTTCACAACAGGGgcttca
ttatttttgaaacaagtAAACGAACCTTTTTTAATGGTTGTCAACTATTT
GAAAATGTTACCACCGTACGTTCATTCGCCTTATTTTTCAAGCGAGCGAA
CGCGGTCGCCTAGATATTATGCTCTGCAAGAGTTGGATTGGAGTGTAGGC
TATGTCATAGAGAAACTTGAGGAGCAAGATATTTTGGATGACACGATAGT
GATTATAACAGGTGGTAATTCATGTAATTGGAAACCAACTTTGACGGATG
CATATCAGAAAACGTCGACAGGTTTTGAACATGTTGAAGtgaaaataaat
tgGGATGATTGTTTTCGAATCCCGTTATGGATAAAAGACATTAAACAAAC
GAAAACCAGTGGGGTTCAACCATCCGAAGATATCGACGAGATCTTGCCTA
TAACATCGCTATATAATACCATATTAGATGCAGCTCACGTGACCAATATT
AATAAGAATAACAACAAGAGTTTCTTGAAGATGATCAGAAAAAGGGATGA
GTCGTGCCCAGTCCCAAAACCTTCTTTCTATGTAGATTTAATGACAAGGA
GTGCTTTAGAACAATTCTCATTTACCGATGCTAAAGATTACAATAATACA
GACGTTTTTAGTGTGAATATGACTGGCTTACGTGATCAAATTGATGAGGT
CATTATGAACCAATCAGTGAAGACTTTGTTTCATTATTACAACGTTGAAA
AGCCTGTAATGTTGACTTTCGAAGAAGGATACAAAATCATTTATTATTAT
TTAGATGgaTCAAAATCATTACGAAAACTATCTGAGCCAATCATAGTGGA
TACTGTCCCAAAAAGATTCCCTAGCAACCAATCAGAGCTCGCCACACATC
TTAACAATATACTTATTAAATCAAGTGACATGTTAAAAGCGCATTTTCAA
ACGAGACAGAATTCAAATTTATGGTCTTCACAATTTGAAATGCCGGTTTA
TCCGTGGTTATTACCGTGTCATAATTTCCCTTATTGTCGTCGTGTTTGGG
ACGCGAATGACGATTTTCGAGATTTATTCCCTTTTGGGAAACCTCGAAGC
GAGAATTTAGATACTTAGatgaagATGGTAACACCAATATTGACCATACT
GGTATACTTCCTCATCaacaatcaaccaatcaaatgcAATGATGAAGAAA
AATCTTCAACATATTCATCAAAGAAACCAAATTTCGTGATTCTTTACATC
GAGCATTTGAATGAGATATTGCTAGATTTGGAAGGTTCAACAGATGAATT
ACCAAACCTTCAGAAGTTTGTCAATTTTGACGGTAACCGGTTTCGCAATG
TTTATGGTGAAGCGTCTTCGGCATCAACTTTTGCAAGCTTATTTACTGGT
AAACCAGCAGTGAACACTGGTATCATTCGTGGTAAACTTCTTCCGTTTAC
CAGTTTCCCGAGTCTTGCAAGCAGTGGTGGGCTGAGTACTAAAGAACCAA
ACCTCGCTTCCACACTGAAGAAAGAAGGATACTCAACAGCTTTCTATGGA
TACTGGAAATTAGGGCTTGGTCCTAAAGGTATAAACAACCCTTTACAACA
TGGTTTTGACACATGGATGGGTGTGGCTTACCCACATAACGAATGGTGTG
AGGAACAAAAGAGTGTCATTACAAACCAAGAATCACTTTTAAACCATCCC
TACCTCAAGTTATTCTACCACACCTCATTCTTATGGTTACTGTTATTCCT
ATTCTTGACAATGCTGGTCTGGTTTAAAGTAGTGTCTGTATACCTATACA
TGAATTTACTGGTTTATACTGTAAGCACAGCTTTGGCTTTCTATATCTTA
CTTCACCTGTTTATAGTGCAGCGGTCAGCTTCGTGTGTTATGTACAGGGA
GAACGAGATTCGTTTACAACCTTACGACATGACAAATCTAACACTGTATT
TCACAACAGGGgcttcattatttttgaaacaagtAAACGAACCTTTTTTA
ATGGTTGTCAACTATTTGAAAATGTTACCACCGTACGTTCATTCGCCTTA
TTTTTCAAGCGAGCGAACGCGGTCGCCTAGATATTATGCTCTGCAAGAGT
TGGATTGGAGTGTAGGCTATGTCATAGAGAAACTTGAGGAGCAAGATATT
TTGGATGACACGATAGTGATTATAACAGGTGGTAATTCATGTAATTGGAA
ACCAACTTTGACGGATGCATATCAGAAAACGTCGACAGGTTTTGAACATG
TTGAAGtgaaaataaattgGGATGATTGTTTTCGAATCCCGTTATGGATA
AAAGACATTAAACAAACGAAAACCAGTGGGGTTCAACCATCCGAAGATAT
CGACGAGATCTTGCCTATAACATCGCTATATAATACCATATTAGATGCAG
CTCACGTGACCAATATTAATAAGAATAACAACAAGAGTTTCTTGAAGATG
ATCAGAAAAAGGGATGAGTCGTGCCCAGTCCCAAAACCTTCTTTCTATGT
AGATTTAATGACAAGGAGTGCTTTAGAACAATTCTCATTTACCGATGCTA
AAGATTACAATAATACAGACGTTTTTAGTGTGAATATGACTGGCTTACGT
GATCAAATTGATGAGGTCATTATGAACCAATCAGTGAAGACTTTGTTTCA
TTATTACAACGTTGAAAAGCCTGTAATGTTGACTTTCGAAGAAGGATACA
AAATCATTTATTATTATTTAGATGgaTCAAAATCATTACGAAAACTATCT
GAGCCAATCATAGTGGATACTGTCCCAAAAAGATTCCCTAGCAACCAATC
AGAGCTCGCCACACATCTTAACAATATACTTATTAAATCAAGTGACATGT
TAAAAGCGCATTTTCAAACGAGACAGAATTCAAATTTATGGTCTTCACAA
TTTGAAATGCCGGTTTATCCGTGGTTATTACCGTGTCATAATTTCCCTTA
TTGTCGTCGTGTTTGGGACGCGAATGACGATTTTCGAGATTTATTCCCTT
TTGGGAAACCTCGAAGCGAGAATTTAGATACTTAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_013372	XLOC_013372	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00023800-protein	TCONS_00023800-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000462	supercontig	sc0000462:110132..115402 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.5748	18.9702	16.1378	15.2302	10.7829	7.82806	7.87715	7.10064	6.27236	5.66584	4.98898	5.3577	3.28581	3.46847	4.25426	4.3476	5.83169	5.63966	2.31499	1.66319	4.91823	4.32269	18.1495	16.094	5.95006	7.50604	1.96103	1.95017	10.1375	11.3944

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR017849	Alkaline_Pase-like_a/b/a
IPR000917	Sulfatase_N
IPR017850	Alkaline_phosphatase_core

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0008484	sulfuric ester hydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0008484	sulfuric ester hydrolase activity

Blast

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BLAST of TCONS_00023800 vs. Swiss-Prot (Human)
Match: STS (Steryl-sulfatase OS=Homo sapiens GN=STS PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 6.496e-24
Identity = 108/417 (25.90%), Postives = 185/417 (44.36%), Query Frame = 3

Query:  132 KSSTYSSKKPNFVILYIEHLNEILLDLEGS-TDELPNLQKFVNFDGNRFRNVYGEXXXXXXXXXXXXGKPAVNTGII---RGKLLPFTSFPSLASSGGLSTKEPNLASTLKKEGYSTAFYGYWKLGLGPKG----INNPLQHGFDTWMGVAYPHNEWCEE-QKSVITNQESLLNHPYLKLFYHTSXXXXXXXXXXTMLVWFKVVSVYLYMNLLVYTVSTALAFYILLHLFIVQRSASCVMYRENEIRLQPYDMTNLTLYFTTGASLFLKQVNE-PFLMVVNYLKMLPPYVHSPYFSSERTRSPRYY-----ALQELDWSVGYVIEKLEEQDILDDTIVIITGGNSCNWKPTLTDA-YQKTSTGFEHVEVKINWDDCFRIPLWIKDIKQTKTSGVQPSEDIDEILPITSLYNTILDAA 1334
            ++ ++++ +PN +++  + L        G+ T   PN+ +  +      +++        + A+  TG+  V +G+    R  +  FT     ASSGGL T E   A  LK +GYSTA  G W LG+         ++PL HGF+ + G++  +   C+  + SV T     L    L++   T      L     + V   V    L++  L+ T+     F   LH F   R  +C M R  EI  QP    NLT   T  A+ F+++  E PFL+V++YL     +VH+  FSS+       +     A++E+DWSVG ++  L+E  + +DT++  T     + +   +       S G        NW+   R+P  ++  +      +Q  + IDE      ++ T+   A
Sbjct:   18 EAESHAASRPNIILVMADDLGIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPLCTPSRAAFMTGRYPVRSGMASWSRTGVFLFT-----ASSGGLPTDEITFAKLLKDQGYSTALIGKWHLGMSCHSKTDFCHHPLHHGFNYFYGISLTNLRDCKPGEGSVFTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPLGVFFSLLFLAALILTL-----FLGFLHYF---RPLNCFMMRNYEIIQQPMSYDNLTQRLTVEAAQFIQRNTETPFLLVLSYL-----HVHTALFSSKDFAGKSQHGVYGDAVEEMDWSVGQILNLLDELRLANDTLIYFTSDQGAHVEEVSSKGEIHGGSNGIYKGGKANNWEGGIRVPGILRWPRV-----IQAGQKIDEPTSNMDIFPTVAKLA 411

The following BLAST results are available for this feature:

BLAST of TCONS_00023800 vs. Swiss-Prot (Human)

BLAST of TCONS_00023800 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
STS	6.496e-24	25.90	Steryl-sulfatase OS=Homo sapiens GN=STS PE=1 SV=2	[more]

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TCONS_00023800 (transcript) - C. hemisphaerica