TCONS_00023577 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023577
Unique NameTCONS_00023577
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3847

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023577 ID=TCONS_00023577|Name=TCONS_00023577|organism=Clytia hemisphaerica|type=transcript|length=3847bp
TACAATATTCAAGCAAGTTGAAATTAGAAGTGATTATAGCGATTGTGGTA
GCATGTGTTTTGTTTGTGGCACTgaacattttcatttgttatTACCGGAT
GCAGAACTTGGATAAACGTTATGCTCGATTCCTCTCACCGTTAACAGATT
ATCAGATTAAACCGGACGATAACATAACAGAACAGGGAATTTATTTACCA
TATAATCCGGCCTACGAATACCCTAGACACAAATTAGAGTTCATCAAAGT
GTTGGGATCTGGAGCTTTTGGTCAGGTTTGGCTAGCTCGAGGCTTAGACG
TGTACAACTGGGGACTGGACATCAATCAAAATAATAATACACAAAAGAAA
CAGAGGAAACCTAGCCTACAGGAATATATTCGGAAAACAAGTCGAACAAA
CAATAATAAAACCAATTGCACCTCTTTTGTAGCCGTTAAAACTCTGAAAG
ATGATGCTACGGACGCGGAATACAAAGATCTAGCGTCTGAAATCAAAATC
CTCATCTACATTGGAAAACACAATAACATTGTCAACTTATTAGGCGCTTG
TACCAAAGGCGGTAGTCTGTTCGCTATACTGGAATATTGCGCCCACGGTG
ACCTGAAAACGTTCTTGAAGAACAGCCGTGAACATTTCTCACAAGAATGG
AAACTATCGACAGGCAATTTACAGAATGCCTTTTCAGTGGGTGACGCGAT
GCATTTTGCACACCAGATCATCAAAGGAATGGCTTTTCTACACGGTAAAA
AGCTTATTCACCGTGATCTTGCATGTCGTAATGTGCTTTTGGGTGAACAT
TTCCGTATCAAGATTTCCGACTTCGGACTTGCTCGGGATATTCAAGAGAA
TGATTGTTATATGAAGACGACAACCGGCATGCTTCCGGTCAAATGGATGA
GTCCGGAAGCCTTGTTTGACCGGATTTACAACACTAAGTCAGATGTGTGG
TCATTTGGTGTGGTGCTTTGGGAAATCAGTACACTTGGGGGAACACCGTA
CCCTGGCATTCCCACCGAAGATCTATTCTCTTTCATCGACGAAGGTTACC
GCATGCCGCAACCTGAAGTTTGTCCAAATGAAATTTATCAAGTCATGACT
CAGTGTTGGCAACAAGATGAAAAAGACAGACCAGAATTCCATGACCTAAT
ACAAACAACGGACCAATTATTAAGAGCAAAGCTGCCAgAAATCCACTATC
GGATGTTAGCCAACGACAGCTACATCATTAACGTATCGGACGAACGTTTA
CTGTCAGAGAATGGTGCATCTTATGCTGCCATGTCCAATAATAACTCTTC
TGCTTCACAAAACAATAATGCTAAGCCAAGATACATCTTAGATAACATGA
TCCGCTTTTTATCACCTATGAAAAGATCGAGACCAACCAGTACGACCGAA
CATCATCTGTTGGGACGTCTCTCTTCGAGTGGCTACAGTGATGTAGTGAT
CGACCCTCCGGAAGCTGGCGCGTGCGCGTGAATAACAATTTTATTGGCTG
TCAATATACGTCTACCTGTACAAGAAATCAATTAAGTAATGTTGGAATTA
TCTATTCACAGAATCCATTCCTTTTCGGTGCTAGAAATAAAGGTGGTTGG
TGTGAATGCACACATTATGAACCTATATTTATTAGTGGCTTTAAAATTAC
AATCAAAATTGACTTAAGATGTaaacttttggtaaaatcaacataaaaat
tATATGTTTGGTAGTACCCTATGTGTTACTCGTTGGTTTCTTTCaatcgt
ccaacggttttgttCCAAACAATGATAATTTATCAACATATTTCTGTGTC
ATTTTATacttattttaaaaagattaattttgTTTCAGTATTTGAAATGT
CATGTAGATAGATATTAATGTTTACCGTTTAGGTTTCTCGACTTTTTCGG
TTGGTGAGAAGGTAGGATACAACTTAAACTACTCTCTTATTTTATGAGAA
CCAGTAAATCTCTGATGATGTTCTCATCCTATTCTTATTAAACTGGAGTA
TAATCAGTTCAATACCCTATTTTTACAAATGTGACCCTTAGTTTGATTAA
AAATCCAGGCTCAGCATTGCtcctaaatttcttttatttttcggcttttt
tgagcctcgttgctttaaaaaaaattataaaaagagtGTATTGCAATACA
CAGGAATGTAGCCAATGCTGCTAGGTACTATATCTGAAACAAAGACTTAG
ATCTCAGGGAGGGGACAGTTACTGTGTTACTTTCTGTTCGTGCCTTGATA
TTAATGTAAATACCgtaatgaaattattttgaaataatcttGAAAATATA
CATATCGTATTGATATCGTGAAAGTTTCAAATACTTCATATCGATTGTAT
TAGATGTGAAATTGTATCTTCGAGAAAAGTTTGAAACTTTTTCGATACTT
CTTGAATTCTTAACAAATTTTGTACATATCTTAGAATGATCTCTAATATA
TATTAATTATTACGCATAATTATATAACGCaataatatattatttttttg
taacataGTTTTAACAGGAGTGTaaattttctaatatttttacttttttt
tcttaacgcaaacgaaaatttttaatttggtCTTAAAATGTTGGGATTTT
TCATATCTTGTCAGGACCTTCCCAAAATGGTCCCCTTGTTATTTTCTTCT
ACTCAAAAATGTCCATACGAGCAAAACATGTCTTTAGGATTCTTCCATTT
CATAAAATGCAAGCTTCATATACTTCAGGTGGTGATCATCCTTCATTGTT
GATGGATTTTGTTTATTTCTCATGTCATCGTTGTTTTGACTTTTCATTCC
GCCATTTTTTTTGGCttgcttcttctttttcaattctCGTTCTTCTTCAG
CTTCATGTATTCTCATCAATTGTTgtgattttaaaattaattcaGGTGTA
CTTAAACCTCTATCAAATGTTACACTTTGATGACTCGTTTTCGTCCTTTC
ATAACTTTCCCTAGGTCTTTCACGAGTGTCTTTTCTTTTGTGTTCATTTT
TTGTCATGTTTTCATTAGAGCTGGCTAAACTGCTATCCAAGACATACCTT
TCTGGATGAAGATTGGCATTTTCCATGATGTCTTTTTTCGATAACAAGTA
TCTAATTTGATCATTTTGTTTCTTAGTTTGTGTAAACGTTTCCTTCTTCT
CTTCTAGCTTAGCTGAACCATTTTCCAAAGTTGTTTCTAGAATaatgaaa
gtattttttaattttccattgttttctatgCTATTTTGAGCAATTGAATC
CAGTTGTGACACTTCATCACTGTGATTCTCATGGATTTTCTTGTAATCAT
TATCCAGCCGGTTTGGTAAATCAGCAAGCATTTTCTTGAAGCATTCCTGG
TTATCAAGTGTTGTTCGTTTAGTGAATTTCAGCTTCGGGAATGATTTTGA
CTCGCCATTTGTGATTTGCCGGTTTTGTTGTAACAATAACTGTTTCTCAC
AATTGGTTAGTTCGTATTTTTTATGTAAAGTACTTTTATTACTTTGCAGC
TCTGGTGGACTTCGAGGGCTTTTCGACATTTTTGACTTCTTGTTTAGCTA
TCCCCACGTTTATATTTTTATGATCTTTATTTTTCCTCCTCGATATAAGC
AGTCTCCATTTCTTTTTATATTCCAGCTCTCTCTCTCATATTAATATGTC
CAGGTTCCAAaaactatatatatatttttttataaaccaATCAAGCTCTA
AAATCCACTTATATTGTACTAGTAAGTCGAGATGTGATAAATAGTACCTT
TCAATTCAACCTCTCGCAAATCAATACACACTAGAAATATATTATTAGTG
CCAACATACTAGAAACATGACGCTTTCTTTTTGTATTCTCAATCGAG
Run BLAST on NCBI

transcript from alignment at sc0000456:229855..238327+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023577 ID=TCONS_00023577|Name=TCONS_00023577|organism=Clytia hemisphaerica|type=transcript|length=8473bp|location=Sequence derived from alignment at sc0000456:229855..238327+ (Clytia hemisphaerica)
TACAATATTCAAGCAAGTTGAAATTAGAAGTGATTATAGCGATTGTGGTA
GCATGTGTTTTGTTTGTGGCACTgaacattttcatttgttatTACCGGAT
GCAGAACTTGGATAAACGTTATGCTCGATTCCTCTCACCGTTAACAGATT
ATCAGGTAAGACAATGCTTTGACCCTGTTTGCACGTTATGGCTCCACTTG
CGTAAAAGCTGATTGAAACCTGTTCATTATATCTATTAGCTAATTTTAAG
GATGGCGTTAATTCCAACTTGTAGAAAAACTTCAACGTGTTTTGAAACAG
AACCAATGGAATCATTACTTGTGAAATTTACATGTGGTCTTACACTTAAT
CATTTTCTTTGCATGTCATTTTTCTTGGTGAAACCATAAANCCCAGATTA
TACAAAGCTGCCTTCCAACCCAAATCAAGGTGAAGGACGGCTAGAGTTCG
TGgttgaattgttttgttttcgtATTTTCAGATTGAGCATTTGCAAGAAT
ATGGACACAATGTAACTGAGCTGACAATCTTGAAACAGAGTGTGAATGCT
TATTTTCGATGTTTGGCAATCAACAAAGCTGGAAGTGACAGTGACGTAAA
GAGAGTCCTGATATCACCTCCAGAGGGTAATCTTTCACATTAATAGAATC
TTTTCTAGCCTCCGATTCCTTTTGTAGTCGAGGCTTTATTATCACTACCG
CCGATAGTCAGAAGCTAGCTAAACCTTTCTCCACTGCAGAATTTTTGAAG
GCTAGGATCACATTTGACTTTAAAGGTTTGTATACAGTTGTCAGTTGTTA
TGAAAATAACTAATCGAGATATTCTGCATCACTTTAAAAGGtcatttttg
gggttttctaaATAATCCAAtttctttatcatttttagTACAATATTCAA
GCAAGTTGAAATTAGAAGTGATTATAGCGATTGTGGTAGCATGTGTTTTG
TTTGTGGCACTgaacattttcatttgttatTACCGGATGCAGAACTTGGA
TAAACGTTATGCTCGATTCCTCTCACCGTTAACAGATTATCAGGTAAGAC
AATGCTTTGACCCTGTTTGCACGTTATGGCTCCACTTGCGTAAAAGCTGA
TTGAAACCTGTTCATTATATCTATTAGCTAATTTTAAGGATGGCGTTAAT
TCCAACTTGTAGAAAAACTTCAACATGTTTTGAAACAGAACCAATGGAAT
CATTACTTGTGAAATTTACATGTGGTCTTACACTTAATCATTTTCTTTGC
ATGTCATTTTTCTTGGTGAAAccataaattataaaaatatttgtctgCTG
TTTGGCTCCGTATACCCATAAAGTCTCACAAATgatttgatagaaaattt
gttaAAGATGTGTCACTTTATCACTTCGTATAAATCTATCAAAACGGATT
TACACTTTAGgagagaaaagtaaaaaaataggtGATGATATATGCTTTTG
ACCTTGCTAATTAATGaaacttgtttttttctccAGATTAAACCGGACGA
TAACATAACAGAACAGGGAATTTATTTACCATATAATCCGGCCTACGAAT
ACCCTAGACACAAATTAGAGTTCATCAAAGTGTTGGGATCTGGAGCTTTT
GGTCAGGTTTGGCTAGCTCGAGGCTTAGACGTGTACAACTGGGGACTGGA
CATCAATCAAAATAATAATACACAAAAGAAACAGAGGAAACCTAGCCTAC
AGGAATATATTCGGAAAACAAGTCGAACAAACAATAATAAAACCAATTGC
ACCTCTTTTGTAGCCGTTAAAACTCTGAAAGGTCAGCACTTGTTTTCGTT
TTGCATGGGAAGTTTTCCATATGGGAAATTAATCTGCTCACTCAATATCA
TttctttttgttgttgagaTGAGAAGATACTTGAGGGTAATCTTATTTTC
GAAATAGAAACGAAAAAAAGCAAGATAAGTTTCTACAAAATAGTTTGTGA
TGAATATACATTATCTCTTTTTTCGTGGAAACTACTCGTTCCTATTGAAA
GACTAATAATCCTTTTGACCTTGAAGCAAACTTCTTTTTATCACGTGTTC
CTCGAAAGGAAACCTCAAGAATTATACGTGCGCCTTTGCTGAATTTTAAA
GGACAACATTTAATGTATTTCCTACCATTTGTTTACaaagcattttttga
gaaaaaaaaacaactttcttcccCTCTCGCGCAAAAATAGATTTTGGGAA
ATTCTTTTGTCAACAGGCGCGCCCCCTTTCTATATCATTTTCTACTATAT
GtccaatgggcttttccagaaatttttctgcccccccccccttattgaAG
GATTTTTTTCGAGCTCCACAGCCCCCTGGAAGTCTTAAAAGGTAAAGACC
CTGGATATCCGTGCATCTTGTTCTGTAcctcctggatatcctctcCCTTT
TATAAGATCCCAGTCCTTGGATGTGAGATAGCATTGAACCCCATGGAtct
ccgatatcctcaacaaaAGGCACGAACTATTTCTGGAAAGCCCAATCCGA
GTAATAAAACCAGAGGATTCTTTACTTTTGATGGAATCAGTTTGATATGA
AATCAAATGTTTTACTGTTGAAATGTTTTATTACAGATGATGCTACGGAC
GCGGAATACAAAGATCTAGCGTCTGAAATCAAAATCCTCATCTACATTGG
AAAACACAATAACATTGTCAACTTATTAGGCGCTTGTACCAAAGGCGGTA
GTCTGTTCGCTATACTGGAATATTGCGCCCACGGTGACCTGAAAACGTTC
TTGAAGAACAGCCGTGAACATTTCTCACAAGAATGGAAACTATCGACAGG
CAATTTACAGAATGCCTTTTCAGTGGGTGACGCGATGCATTTTGCACACC
AGATCATCAAAGGAATGGCTTTTCTACACGGTAAAAAGGTAGGAGTTATT
GGTTATGNCCACCAGATCATCAAAGGGATGGCCTTTCTACACGGTAAAAA
GGTAGGAGTTATTGGTTATGACCGATCTTAAGTGGGTGGGTACTTAACAT
TAGAATTCAGCAATTTCTATGATAAGAATGATATTCCTCATCGATTTTTT
TTGTCGGCGGTCCTAAAGCACgctcatttttttttcataaagcgTGTTGC
ACCGAATTTGATGATTGAGGAGaaagaaagagagagagagtttTACTTCC
GCCTGTAACAATTCCGTGCTAATTTCCTTCGTAATAAGAGAGGGGAGATA
GAATAGTCAATCTTCCAAATCTCTCGTGAGAATATTTGCTTTGAAGACAA
TTTCAgcttatttttgatatttcattgATGCGGTGATGACTTATTACACC
ATGTTGTTATTTGTGTACGTGTACGGTTTTTTATTGTAAAACGTTCGAAA
TAAtgtatgacgtcattttatcagCTGATTCATTTCTCAAGGGTATAATT
ATCAAGTTAATGAGAGTGACAATTTATACCTGTCTACTTAATTCTTATCG
GAACATCAATAGTAATGACAATGAATTCGAGTGCCCGAGGCTAAAATTAA
ATCAGAAACATCAGAAGTATTGAGATGTCTCACAACTTTTAAATTTACAG
AAGCTGTAGGTTTTGATCTAGAAAGCATGCTTTCTCACACACCATACACC
CATACAATGAATGTGCTTTTCTTATAACGAGAAAAAAGCTGATGAAAGAT
ATGATATTTTTTACACCAATTTCAGAACGCgtgaaatgaaatatttattt
tctattAGCACTGAGCATCAATGCTTTGAAGGTTTTCGCACGTATATTAT
TGCGTCCCTTATTTTGTTAACGTTTCGCGCTTTACCCTTCATGCTCGTTA
TTACATACTCAATAAAATATCCAGAAACTCGGGTCTCGGAAGCGTTCTTT
CGGGATTCTCTCAAGATTATATCACCAgttataaattaacctttgtctgt
tcgtccgtccatCTGTAACCAGCTTTTCTGGAGatcggctcattattttt
ttctgatgttttttgGCACGAAGATGCAGTATGGCAACGCCcgaattgtg
acggagcccgattttcaaaaaatattttccggccgaaatagccggaagta
tgccggaaaacctgtttttttttgcattttttagagattttaccatcagt
tttttctgattttttctgacggaaatcgccgtttttacagattttcttgg
ccttttttctttataaattgctttatttattcacacaaaaacattattga
taacaatgcccacgatcaagcatgattcaattgtcaatgaaactgatttt
tgcacCTGGAACCTTCTATTGATTACTTGATCATTTCTTTATAGAAGAAG
GTATTTCATGGTGATGCCCAAACTTTTGCATCGTTCGATTAccgaaaaaa
acatttttttcgagcTGGAACTTCTTAAAATCGCCGTAACAGCCGAAAAA
CGGCGCAAAACgagtttcattgatttttttaattacacTCGactgatttt
catgattttttgtacaGTTAAGCAAACTAGTTATTCCCAAATTGAAAGGG
ACcccaatttcaaagaaaaaaatagtttcGTGTCGCCAGATCcagaaatg
tcccgaaaaaaagtggTTTTTCGGGAATTcttcgagattttctcattttt
ttctgatgttttgtttattttgaatttaatgattTTCTGTTGATCAGCCA
GGTTGGTCAATGAATGATCACTTGTTTTGCTTCTTCTTTCTAGCTTATTC
ACCGTGATCTTGCATGTCGTAATGTGCTTTTGGGTGAACATTTCCGTATC
AAGATTTCCGACTTCGGACTTGCTCGGGATATTCAAGAGAATGATTGTTA
TATGAAGACGACAACCGGCATGCTTCCGGTCAAATGGATGAGTCCGGAAG
CCTTGTTTGACCGGATTTACAACACTAAGTCAGATGTGTAAGTTTGTGTT
TTAGCGGTTTTGAGTGATTTCAATgtttagatattttttcaaaagtccat
TTCTCGTTTGGAAAGGGTTTTAATGTAAAGTAATTGTACTTTTTTTCGAC
TTTTGGGACCTTCAACTTATCAACTATCCTTGTCTCAATTTGAATGGGAT
TTATATCCTTGTTCCTCGTCTTctcgaccaaaatttcaatttctattATG
AGTATTTCCACAATTCAACGTCAGGTGGTCATTTGGTGTGGTGCTTTGGG
AAATCAGTACACTTGGGGGAACACCGTACCCTGGCATTCCCACCGAAGAT
CTATTCTCTTTCATCGACGAAGGTTACCGCATGCCGCAACCTGAAGTTTG
TCCAAATGAAATTTATCAAGTCATGACTCAGTGTTGGCAACAAGATGAAA
AAGACAGACCAGAATTCCATGACCTAATACAAACAACGGACCAATTATTA
AGAGCAAAGCTGCCAGTGAGTTTCAATGAACTAATTCTTGGATAAGCTTC
ACTTCTTTGCAAAATTCATATTAAGTTGATACAAGCCTATCGTAGCTTCT
TATAAGTGCCTTCTTTTTTTCCTACATGTACAACCGGGTTTAAAAGGAGC
CAAGACGAATACAGACAGGTGTCCCTATTTGAAAAGGTTTCCGAACAGGC
AAACAATTCTTACAACAAAAACTGTCTTCATTGAATCTTACGATGACAAt
gataatgtttatttttcatatttcaaggAAATCCACTATCGGATGTTAGC
CAACGACAGCTACATCATTAACGTATCGGACGAACGTTTACTGTCAGAGA
ATGGTGCATCTTATGCTGCCATGTCCAATAATAACTCTTCTGCTTCACAA
AACAATAATGCTAAGCCAAGATACATCTTAGATAACATGATCCGCTTTTT
ATCACCTATGAAAAGATCGAGACCAACCAGGTaagtctgtctgtctgtct
gtctgtctgtctgtgaaaatataaaattctttGGGGTAGCCTTGATACTG
GCTAGAGCGTTATTCGTTATTCTTAAGTTGATTTTTTAGgccttggaatt
ttcaaaattaaaacttatgattttatttctttaattaATAGACTCTCTAT
CTATCTTACATTTCAGTACGACCGAACATCATCTGTTGGGACGTCTCTCT
TCGAGTGGCTACAGTGATGTAGTGATCGACCCTCCGGAAGCTGGCGCGTG
CGCGTGAATAACAATTTTATTGGCTGTCAATATACGTCTACCTGTACAAG
AAATCAATTAAGTAATGTTGGAATTATCTATTCACAGAATCCATTCCTTT
TCGGTGCTAGAAATAAAGGTGGTTGGTGTGAATGCACACATTATGAACCT
ATATTTATTAGTGGCTTTAAAATTACAATCAAAATTGACTTAAGATGTaa
acttttggtaaaatcaacataaaaattATATGTTTGGTAGTACCCTATGT
GTTACTCGTTGGTTTCTTTCaatcgtccaacggttttgttCCAAACAATG
ATAATTTATCAACATATTTCTGTGTCATTTTATacttattttaaaaagat
taattttgTTTCAGTATTTGAAATGTCATGTAGATAGATATTAATGTTTA
CCGTTTAGGTTTCTCGACTTTTTCGGTTGGTGAGAAGGTAGGATACAACT
TAAACTACTCTCTTATTTTATGAGAACCAGTAAATCTCTGATGATGTTCT
CATCCTATTCTTATTAAACTGGAGTATAATCAGTTCAATACCCTATTTTT
ACAAATGTGACCCTTAGTTTGATTAAAAATCCAGGCTCAGCATTGCtcct
aaatttcttttatttttcggcttttttgagcctcgttgctttaaaaaaaa
ttataaaaagagtGTATTGCAATACACAGGAATGTAGCCAATGCTGCTAG
GTACTATATCTGAAACAAAGACTTAGATCTCAGGGAGGGGACAGTTACTG
TGTTACTTTCTGTTCGTGCCTTGATATTAATGTAAATACCgtaatgaaat
tattttgaaataatcttGAAAATATACATATCGTATTGATATCGTGAAAG
TTTCAAATACTTCATATCGATTGTATTAGATGTGAAATTGTATCTTCGAG
AAAAGTTTGAAACTTTTTCGATACTTCTTGAATTCTTAACAAATTTTGTA
CATATCTTAGAATGATCTCTAATATATATTAATTATTACGCATAATTATA
TAACGCaataatatattatttttttgtaacataGTTTTAACAGGAGTGTa
aattttctaatatttttacttttttttcttaacgcaaacgaaaattttta
atttggtCTTAAAATGTTGGGATTTTTCATATCTTGTCAGGACCTTCCCA
AAATGGTCCCCTTGTTATTTTCTTCTACTCAAAAATGTCCATACGAGCAA
AACATGTCTTTAGGATTCTTCCATTTCATAAAATGCAAGCTTCATATACT
TCAGGTGGTGATCATCCTTCATTGTTGATGGATTTTGTTTATTTCTCATG
TCATCGTTGTTTTGACTTTTCATTCCGCCATTTTTTTTGGCttgcttctt
ctttttcaattctCGTTCTTCTTCAGCTTCATGTATTCTCATCAATTGTT
gtgattttaaaattaattcaGGTGTACTTAAACCTCTATCAAATGTTACA
CTTTGATGACTCGTTTTCGTCCTTTCATAACTTTCCCTAGGTCTTTCACG
AGTGTCTTTTCTTTTGTGTTCATTTTTTGTCATGTTTTCATTAGAGCTGG
CTAAACTGCTATCCAAGACATACCTTTCTGGATGAAGATTGGCATTTTCC
ATGATGTCTTTTTTCGATAACAAGTATCTAATTTGATCATTTTGTTTCTT
AGTTTGTGTAAACGTTTCCTTCTTCTCTTCTAGCTTAGCTGAACCATTTT
CCAAAGTTGTTTCTAGAATaatgaaagtattttttaattttccattgttt
tctatgCTATTTTGAGCAATTGAATCCAGTTGTGACACTTCATCACTGTG
ATTCTCATGGATTTTCTTGTAATCATTATCCAGCCGGTTTGGTAAATCAG
CAAGCATTTTCTTGAAGCATTCCTGGTTATCAAGTGTTGTTCGTTTAGTG
AATTTCAGCTTCGGGAATGATTTTGACTCGCCATTTGTGATTTGCCGGTT
TTGTTGTAACAATAACTGTTTCTCACAATTGGTTAGTTCGTATTTTTTAT
GTAAAGTACTTTTATTACTTTGCAGCTCTGGTGGACTTCGAGGGCTTTTC
GACATTTTTGACTTCTTGTTTAGCTATCCCCACGTTTATATTTTTATGAT
CTTTATTTTTCCTCCTCGATATAAGCAGTCTCCATTTCTTTTTATATTCC
AGCTCTCTCTCTCATATTAATATGTCCAGGTTCCAAaaactatatatata
tttttttataaaccaATCAAGCTCTAAAATCCACTTATATTGTACTAGTA
AGTCGAGATGTGATAAATAGTACCTTTCAATTCAACCTCTCGCAAATCAA
TACACACTAGAAATATATTATTAGTGCCAACATACTAGAAACATGACGCT
TTCTTTTTGTATTCTCAATCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013247XLOC_013247Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023577-exon-sc0000456-1491911889:229855..230009TCONS_00023577-exon-sc0000456-1491911889:229855..230009Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1510915933:229855..230009TCONS_00023577-exon-sc0000456-1510915933:229855..230009Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1575043694:229855..230009TCONS_00023577-exon-sc0000456-1575043694:229855..230009Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1491911889:231341..231635TCONS_00023577-exon-sc0000456-1491911889:231341..231635Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1510915933:231341..231635TCONS_00023577-exon-sc0000456-1510915933:231341..231635Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1575043694:231341..231635TCONS_00023577-exon-sc0000456-1575043694:231341..231635Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1491911889:232441..232742TCONS_00023577-exon-sc0000456-1491911889:232441..232742Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1510915933:232441..232742TCONS_00023577-exon-sc0000456-1510915933:232441..232742Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1575043694:232441..232742TCONS_00023577-exon-sc0000456-1575043694:232441..232742Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1491911889:234548..234741TCONS_00023577-exon-sc0000456-1491911889:234548..234741Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1510915933:234548..234741TCONS_00023577-exon-sc0000456-1510915933:234548..234741Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1575043694:234548..234741TCONS_00023577-exon-sc0000456-1575043694:234548..234741Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1491911889:234979..235219TCONS_00023577-exon-sc0000456-1491911889:234979..235219Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1510915933:234979..235219TCONS_00023577-exon-sc0000456-1510915933:234979..235219Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1575043694:234979..235219TCONS_00023577-exon-sc0000456-1575043694:234979..235219Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1491911889:235482..235684TCONS_00023577-exon-sc0000456-1491911889:235482..235684Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1510915933:235482..235684TCONS_00023577-exon-sc0000456-1510915933:235482..235684Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1575043694:235482..235684TCONS_00023577-exon-sc0000456-1575043694:235482..235684Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1491911889:235871..238327TCONS_00023577-exon-sc0000456-1491911889:235871..238327Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1510915933:235871..238327TCONS_00023577-exon-sc0000456-1510915933:235871..238327Clytia hemisphaericaexon
TCONS_00023577-exon-sc0000456-1575043694:235871..238327TCONS_00023577-exon-sc0000456-1575043694:235871..238327Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000456supercontigsc0000456:229855..238327 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.24572e-05	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9.30738e-06	0	0	0	3.78813e-09	0	0	0
Blast
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BLAST of TCONS_00023577 vs. Swiss-Prot (Human)
Match: FGFR1 (Fibroblast growth factor receptor 1 OS=Homo sapiens GN=FGFR1 PE=1 SV=3)

HSP 1 Score: 286.574 bits (732), Expect = 1.787e-81
Identity = 156/377 (41.38%), Postives = 214/377 (56.76%), Query Frame = 3 
Query:   42 IVVACVLFVALNIFICYYRMQNLDKRYARFLSPLTDYQIKPDDNITEQGIYLPYNPAYEYPRHKLEFIKVLGSGAFGQVWLARGLDVYNWGLDIXXXXXXXXXXXXPSLQEYIXXXXXXXXXXXXXXXFVAVKTLKDDATDAEYKDLASEIKILIYIGKHNNIVNLLGACTKGGSLFAILEYCAHGDLKTFLKNSREHFSQEWKLSTGNLQNAFSVGDAMHFAHQIIKGMAFLHGKKLIHRDLACRNVLLGEHFRIKISDFGLARDIQENDCYMKTTTGMLPVKWMSPEALFDRIYNTKSDVWSFGVVLWEISTLGGTPYPGIPTEDLFSFIDEGYRMPQPEVCPNEIYQVMTQCWQQDEKDRPEFHDLIQTTDQLL 1172
            + V+     ++N  +   R   L       L+ +++Y+             LP +P +E PR +L   K LG G FGQV LA  +     GLD                            +K N  + VAVK LK DAT+ +  DL SE++++  IGKH NI+NLLGACT+ G L+ I+EY + G+L+ +L+  R    +     + N +   S  D +  A+Q+ +GM +L  KK IHRDLA RNVL+ E   +KI+DFGLARDI   D Y KTT G LPVKWM+PEALFDRIY  +SDVWSFGV+LWEI TLGG+PYPG+P E+LF  + EG+RM +P  C NE+Y +M  CW      RP F  L++  D+++
Sbjct:  427 VTVSADSSASMNSGVLLVRPSRLSSSGTPMLAGVSEYE-------------LPEDPRWELPRDRLVLGKPLGEGCFGQVVLAEAI-----GLD---------------------------KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 758
The following BLAST results are available for this feature:
BLAST of TCONS_00023577 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FGFR11.787e-8141.38Fibroblast growth factor receptor 1 OS=Homo sapien... [more]
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