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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023436 ID=TCONS_00023436|Name=TCONS_00023436|organism=Clytia hemisphaerica|type=transcript|length=941bp
GTAAAGTATTGTGACGTAGCCCTGAAGCTATATAAGGCAATTATCGAAAA
TATCATTTTAAATAATACCGAAACGTGGTCCATGGTCACGAAAACAGACA
TGACCAAGATCGAAAAGCTACAAAAAGAGGTGCTGTATTATCTCTtcaac
atgaaaatttcaaccCCTTATGAAGGGTTCCTAAGTGAAGTTGGGTTACG
AAAAATAGAGCATGAAATAAATATAAGGAAATTCATGCTATTCCACAAAT
TCAAGAATTCAAATAATGAAAGAATTGCAAAACAAATTCTTGAAGAGCAA
ATAAAAAGACAATATGAAAACAATTGGTACAGCCAATTAGAGGCTTTGAG
CGTTAAGTATAAGTTAAATGATGACTTAAGTGAAGTGacgaatgaaacaa
aaatggCATGGAAAAAGAGAGTCGAAAAAGCAGTCGATGAGAAACGGCTC
GTCGAATTCAACGAAAATAAAGGATCAAAATCAAGGCTGCTAACCAACCT
CAAACGGGAAAAATATACTCATGAATTAACAAAGAACGAGGTGACTGATG
TTTTAAATATAAGACTAAATATGACGGACTTAAAAGACAATTACCGAAAC
AACAACCTGGCTAATCAAAATTGTCCGTTCTGCAATGAAAACAAACATAC
TACAGAGCATGTGATTGAATGTAAAAATCTGAAAGAACTGACAAGTCACA
ACTTAANaaaaaaaaaaaaaaaaaaaaagcgggAGAAGAAACCAACGGAC
TTCCAATTTTCATCCTTCTACGCCTCTGCCGCCCTTTCCAAGAGGGTGGT
AGAAGTTAGTCTTTTTTCCTACTATCGACTGTTGAATTTCTTCTACTGAC
TTTCGTATTACTATATCAGTGGTATTATAATATAATTATAACCAGAAATA
ATATAATTAGGACaagaatttgcaaaattttgtatattttg Run BLAST on NCBI protein sequence of TCONS_00023436-protein >TCONS_00023436-protein ID=TCONS_00023436-protein|Name=TCONS_00023436-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
VKYCDVALKLYKAIIENIILNNTETWSMVTKTDMTKIEKLQKEVLYYLFN
MKISTPYEGFLSEVGLRKIEHEINIRKFMLFHKFKNSNNERIAKQILEEQ
IKRQYENNWYSQLEALSVKYKLNDDLSEVTNETKMAWKKRVEKAVDEKRL
VEFNENKGSKSRLLTNLKREKYTHELTKNEVTDVLNIRLNMTDLKDNYRN
NNLANQNCPFCNENKHTTEHVIECKNLKELTSHNLXKKKKKKKREKKPTD
FQFSSFYASAALSKRVVEVSLFSYYRLLNFFY Run BLAST on NCBI transcript from alignment at sc0000453:259561..260501 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023436 ID=TCONS_00023436|Name=TCONS_00023436|organism=Clytia hemisphaerica|type=transcript|length=941bp|location=Sequence derived from alignment at sc0000453:259561..260501 (Clytia hemisphaerica)
caaaatatacaaaattttgcaaattcttGTCCTAATTATATTATTTCTGG
TTATAATTATATTATAATACCACTGATATAGTAATACGAAAGTCAGTAGA
AGAAATTCAACAGTCGATAGTAGGAAAAAAGACTAACTTCTACCACCCTC
TTGGAAAGGGCGGCAGAGGCGTAGAAGGATGAAAATTGGAAGTCCGTTGG
TTTCTTCTcccgctttttttttttttttttttttNTTAAGTTGTGACTTG
TCAGTTCTTTCAGATTTTTACATTCAATCACATGCTCTGTAGTATGTTTG
TTTTCATTGCAGAACGGACAATTTTGATTAGCCAGGTTGTTGTTTCGGTA
ATTGTCTTTTAAGTCCGTCATATTTAGTCTTATATTTAAAACATCAGTCA
CCTCGTTCTTTGTTAATTCATGAGTATATTTTTCCCGTTTGAGGTTGGTT
AGCAGCCTTGATTTTGATCCTTTATTTTCGTTGAATTCGACGAGCCGTTT
CTCATCGACTGCTTTTTCGACTCTCTTTTTCCATGccatttttgtttcat
tcgtCACTTCACTTAAGTCATCATTTAACTTATACTTAACGCTCAAAGCC
TCTAATTGGCTGTACCAATTGTTTTCATATTGTCTTTTTATTTGCTCTTC
AAGAATTTGTTTTGCAATTCTTTCATTATTTGAATTCTTGAATTTGTGGA
ATAGCATGAATTTCCTTATATTTATTTCATGCTCTATTTTTCGTAACCCA
ACTTCACTTAGGAACCCTTCATAAGGggttgaaattttcatgttgaAGAG
ATAATACAGCACCTCTTTTTGTAGCTTTTCGATCTTGGTCATGTCTGTTT
TCGTGACCATGGACCACGTTTCGGTATTATTTAAAATGATATTTTCGATA
ATTGCCTTATATAGCTTCAGGGCTACGTCACAATACTTTAC Coding sequence (CDS) from alignment at sc0000453:259561..260501 >TCONS_00023436 ID=TCONS_00023436|Name=TCONS_00023436|organism=Clytia hemisphaerica|type=CDS|length=849bp|location=Sequence derived from alignment at sc0000453:259561..260501 (Clytia hemisphaerica)
TCAGTAGAAGAAATTCAACAGTCGATAGTAGGAAAAAAGACTAACTTCTA
CCACCCTCTTGGAAAGGGCGGCAGAGGCGTAGAAGGATGAAAATTGGAAG
TCCGTTGGTTTCTTCTcccgctttttttttttttttttttttNTTAAGTT
GTGACTTGTCAGTTCTTTCAGATTTTTACATTCAATCACATGCTCTGTAG
TATGTTTGTTTTCATTGCAGAACGGACAATTTTGATTAGCCAGGTTGTTG
TTTCGGTAATTGTCTTTTAAGTCCGTCATATTTAGTCTTATATTTAAAAC
ATCAGTCACCTCGTTCTTTGTTAATTCATGAGTATATTTTTCCCGTTTGA
GGTTGGTTAGCAGCCTTGATTTTGATCCTTTATTTTCGTTGAATTCGACG
AGCCGTTTCTCATCGACTGCTTTTTCGACTCTCTTTTTCCATGccatttt
tgtttcattcgtCACTTCACTTAAGTCATCATTTAACTTATACTTAACGC
TCAAAGCCTCTAATTGGCTGTACCAATTGTTTTCATATTGTCTTTTTATT
TGCTCTTCAAGAATTTGTTTTGCAATTCTTTCATTATTTGAATTCTTGAA
TTTGTGGAATAGCATGAATTTCCTTATATTTATTTCATGCTCTATTTTTC
GTAACCCAACTTCACTTAGGAACCCTTCATAAGGggttgaaattttcatg
ttgaAGAGATAATACAGCACCTCTTTTTGTAGCTTTTCGATCTTGGTCAT
GTCTGTTTTCGTGACCATGGACCACGTTTCGGTATTATTTAAAATGATAT
TTTCGATAATTGCCTTATATAGCTTCAGGGCTACGTCACAATACTTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023436-exon-sc0000453-1491911889:259561..260501 | TCONS_00023436-exon-sc0000453-1491911889:259561..260501 | Clytia hemisphaerica | exon |
| TCONS_00023436-exon-sc0000453-1510915933:259561..260501 | TCONS_00023436-exon-sc0000453-1510915933:259561..260501 | Clytia hemisphaerica | exon |
| TCONS_00023436-exon-sc0000453-1575043694:259561..260501 | TCONS_00023436-exon-sc0000453-1575043694:259561..260501 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000453 | supercontig | sc0000453:259561..260501 . |
Blast
The following BLAST results are available for this feature:
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