TCONS_00023325 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023325
Unique NameTCONS_00023325
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2521

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023325 ID=TCONS_00023325|Name=TCONS_00023325|organism=Clytia hemisphaerica|type=transcript|length=2521bp
ATAaagatacaaaaataaaaaacaatgtcTGCAATGCAAAGGGATATCAT
GAAAAGCAAATTACCACCTTTGCCAAGTAAACCTGTTGGTCAAGCATCAA
GATTTTCAAGTCTTGTTCCAAAAAGAAATGTCAAAGATTACTCCCCATCC
TCATGGGAAGGATATTTTGATAAACAGCATGATGTCAAAGTTGGAGAGaa
tACATTTAGGTTATATACCAGAGGTACAGATGGACCAGTAGTCTTACTTC
TTCACGGTGGTGGACATTCAGCACTATCATGGGCAGTCTTTACGAAAACC
CTATGTGATATGTGTGATTGCCAAGTTGCTGCTATTGATTTTCGAGGTCA
TGgagACTCAAGTACAACCAATGATACCAACATGGCAGCTGATGTAATGG
CTTATGATATCTGTCATGTTATACTGAATTTCTATGACCAATCACCACCT
CCAATTGTTATGATGGGCCATAGTATGGGAGGTGCAATCGCTGTTCACAT
CGCTGCAAAAAAGATTCTTCCAAATTTGAGTGGCCTTGCTGTTATAGATG
TAGTGGAAGGGACTGCACTAGATGCACTGTCTTCAATGCAAAGTTTTCTT
CGAAGTAGACCTCAGAAGTTTAGTTCTCTGAAACAAGCTATTGAATGGAG
TATAAGGTCAGGGCAGCTGAGGAATCTTACTTCTGCTAAGATATCAATGG
CAGGGCAACTAAAAAAGGTTGAAGGAACGAGCAGTCAATCAAGCAATGTA
TCCTTAGATATTGTTGAAGAAACAGAAGAGGAGGTTGAAAATGAACAAAC
CTCATTTTCCTCAACATCAATAAGCGAGGAACAGTCAGAGTATACTTGGA
GGGTCGATTTAgcagaaactgaaaaatattgGAAAGGATGGTTTGAGAAT
ATGTCATCACTTTTTGTTTCTTGCCCAGTTCCAAAGCTACTTTTACTAGC
AGGAATAGATAGACTTGATAAAGATCTGACAATAGGTCAAATGCAAGGGA
AATTTCAGATGCAAGTTCTACCTAATTGTGGACATATGGTTCATGAGGAT
GTACCAGATAAGGTTGCAGAAATCCTTACTGCCTTTCTATTGAGACAAAA
ATTGACTGTGGCCAAAAGCAATTTTGAAAGacacacACCATCTTGCTGAC
ATATTCTggttcatgtttttatttttttttcaaactttataaAAATTGTA
CATAgtgaaaagatttttaagttattttctaaaatttcctgaAATTAGGT
AtcatcttttctctttttttttctcatcaaACTTTGCCCATATGCATACT
TTGTTTGTCAGTTATATTATACCCATGTTGTTAAATCTCATTCCTTTTTA
TATTAGAAGAGATAGAAAAGTATAGTTGAGTAAAATGGCagcaaaaagga
agaaaacatcTGATGGGAATACCAGTGCAACAAATAGCAATAAGTCACTG
ACTGCAACCGATGAtattgaagattttgaaaacgagagTGATCCTTTCTC
CAAGCCATGGGAAGGATCTGACGCCATTTTGGTTGTGGAAAACAAGAAGT
TATATGTCCATTCCAACATGCTATCTTTCTCTTCTCCTGTTTTCAAATCC
ATGTTCAATTCTGGTTATTTCAAAgaatcaaaaactaaaactgtTGATTT
GAAAGGCAAAAAATATGCAGATGTTGTGAATCTATTGAAAATGATATACC
CTCAGTTTGAAATTGATCTGTGGATGACAACAATATCAGAGCTTCAAGTG
ATGATGACACTGATCGAAGAATACCTCATTAAGTCATTACGTAAAAGAAT
TGAGGACCACACCCTCTACATTGCCAACATCAAAATACTGAATGGTGGTT
ATCAAGAAGTTTGTGCTTTGGATCTGATGTTACTGGCAGATCTGTTTAAT
TTCAATGATACTATAGACCAATGTGCAAAATATATAGGTGCTCGATATTA
TTATACTGACCATTCCAATGAATCGACTTTTTCTATGGATACGGACGATG
AAGACACCGAGGACAGCCCGTCAatgaaagaatttttccaagtccATAAA
TTAACAGATAAAGCCAAATTAAAAATCATGGTCAACATTGGTAAGAAGCA
TTTAGAGTTTATTGAAGAGGAGAGAGATGATATGTATAAAGAAATGATGA
CTAAGCGAACGCGCGAACATTCCTATTTGAAAAGTGAGATGTGTCGCAGG
AAAATGGAAGATTTGAAGATAGTAATGAATGAAATGACGTTATTGATTAA
ATGAAGATTAATTGGTAGGTTTACTTTTATTCAGAGAAGCCTGTTCTTTA
TGGTGTTTCCATCTTCAACCTTATGTTGCTTTCTTTTAATCGAACGAAAT
TGTAATGATACGTTTTTGCTTTATCTgggtaaaaataatttgaaattatt
ttgcaaCCAACTATAACATAGAAAACGTGAATCATGGAATTCAATATAAA
TGCAGTATTTTGATgagaaggaaaaacaaattgatGTGAACAAATTCTTA
ATTTATGAGACAATGCGCAAG
Run BLAST on NCBI

transcript from alignment at sc0000450:250841..258125-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023325 ID=TCONS_00023325|Name=TCONS_00023325|organism=Clytia hemisphaerica|type=transcript|length=7285bp|location=Sequence derived from alignment at sc0000450:250841..258125- (Clytia hemisphaerica)
ATAAAGATACAAAAATAAAAAACAATGTCTGCAATGCAAAGGGATATCAT
GAAAAGCAAATTACCACCTTTGCCAAGTAAACCTGTTGGTCAAGCATCAA
GATTTTCAAGTCTGTAAGTTTTTGTTAAAAAATTCTTGAAACATATTTTG
ATGTATTCTATGTTTAATTCTAATTCTGTCCTTTTTAAAATAACCAAATG
CTGTATAAAATGCTACCTGGAATTATTTATCATCATCATCATGATAAGTA
AAATCATTAACTTTAAATTTTCAGTGTTCCAAAAAGAAATGTCAAAGATT
ACTCCCCATCCTCATGGGAAGGATATTTTGATAAACAGCATGATGTCAAA
GTTGGAGAGAATGTATTTTTTCATTTTATTTCGACTATTTACTAACTTCT
TTCGTTATCTGTCGTACCTGTAAAATGAGTGACCCTGGAGACTAACCTTT
GATAAGTTCTTTGTTAGGAAGTAGTGTAAACCTGTCTGAAGACTAATGCA
TTCACTTTTAACTTTCACTTACTCACACTCCTTTAACCCTTTCTCCTTGG
AGTGATAAGGAGTGCTATGCACAACTTTTATTAGTGAAGTCTAAATTTTA
TTGTGTACAACTGATCACCATCCTCAGAGATTTTTGGAGGTGTGTCTGCG
CTAATCCCAACCTCAAATATGCTGCCTGTAGATACAACAACTTCTCTGAT
AAAGTAGATGCTATGTGTTTAAACTTAGAGCTCTAAACTCTTATCTGAAT
TTTCTATTTAAAGACATTTAGGTTATATACCAGAGGTACAGATGGACCAG
TAGTCTTACTTCTTCACGGTGGTGGACATTCAGCACTATCATGGGCAGTC
TTTACGGTATGTTTTGAAGCTTTAGCATCTTTTGATATTGGTTGATAAAT
TATGGTGGGTGAAGTAATGATAATATTAATAACAAATAAAATGTTCTTTA
CTACACCCATTGTCCCACAAAAATTATTCTTTTTCCATCCTTTTAAAAAT
ATCTTGTTTAATAAACAGGTTCGATTATACATTCTCATTGAAGGTTCTTC
AGATTGAAGATTCTTCAAATAGAGTCTAACCCAAGCACATGATCTTCTAA
TTTTTAGAAAACCCTATGTGATATGTGTGATTGCCAAGTTGCTGCTATTG
ATTTTCGAGGTCATGGTAAGTTTTCAACAGGGACAAACTTTCTAGATAAA
TTAATGAATCTGTATAAAAACATTATGGCAAAGCATTTTTATGACTTTTG
TTAGCTCATCCTTTGTTCCAAATGGTACATTGCTTACTTTTTGATCTTAT
TACCACATTCCTTAGTTTAATACTCTTATCAATGATTCTTTGGTACCTAA
TAAACAGGGAGGGGTTGGAACAATTGGTTTTTGTGGAAAGAAATTGCAGC
AGGGTTGGAATAAAAATGTCTTCGGATTTCCATTAATTGATAAATAGGAA
AAACTTGATAGGTCTGAGAGTATTGTTAAAAAAAGTGAACAAAGCAAATT
TAAAAAAAACTTGAACTTTTTAACAATAGAAAATTTCAGACCAGAGATTT
ATTTAAGGTAATGTTGATAAATATTGAAGCATCGTTAGAGCTTTTGATTC
TTATTAATAAAATCTCTTGCTCTTAATCATCAGTGAACTATTTTCTTGGT
TAAAATACTTGATGTGAGTTCTCACTGTTTCTCACTTAGTTATTGTCTTT
TTTGTTTTTAGGAGACTCAAGTACAACCAATGATACCAACATGGCAGCTG
ATGTAATGGCTTAGTATGTAACACTTGATGAATAAGGATAGTGATAATTT
GTAATGTAAGGGTACAATATAATGTTACTTTACAAATGCATTTACTTCTG
TTCTTTTTAGTGATATCTGTCATGTTATACTGAATTTCTATGACCAATCA
CCACCTCCAATTGTTATGATGGGCCATAGGTATGTGTAAGAATATTTTTT
AATGTAGTAATTATTTGTTTTTTTGAAACTTTTAGTTTTTTGACCTACCC
CGGTGGGGTGGAGGTCCTATAAATTAACCCATGTTCGTTCGTTCGTTAGT
TAGTGTGTTAGTTACCAGCTTTTCTCGAGATTGGCTCATTAGTTTTTTCT
GATTTTTGGCACAAAGGTGCATGACCATAAACCCTCAAATGTGACGGAGC
CCGATTTTCTAAAAAAAAATTTTTTANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTTTTT
TTGTATTTTGACCAGTTATGTCTTATGTGTTTCATTGTTTCAATGTTCAC
TGATTAGTTTGATAACCAGGTAGGTCCATAAAAGTATCGCTTGTTCTATA
TTATGTTTATTCTTCTAGCACTGAGGTAGCACACAGCTTACAAAAGATCT
TTCTTTTTCCTATCGGCTTTTTTTTTAGTATGGGAGGTGCAATCGCTGTT
CACATCGCTGCAAAAAAGATTCTTCCAAATTTGAGTGGCCTTGCTGTTAT
AGATGTAGTGGAAGGTTGTGATTTTTCTTTGTTATTATTTGTAATTATTT
CAGACTAATTTTGCTAAGGAAGCTTTTGAAAGTACGACTGTTATTTCAAA
ATCAGCTTTTTAAAAAAGGGGTTATTACATTGGTCATGCCGTGTACACTT
ATATCATGATTTATTGGATCGTCTGATTTATTGGATATTTGTTTCATATA
AGTTTTTTTGACATCCATCAATTACATCAAATCTTTGAAAAACTGGACAT
GTAAATCTATCGAATTCTTTCCCAAAACGAGATATGTTTCCATGTTATAA
TGTAACAAATCAACTTTTCATCCAATGAACTATGTTCAGTATTGTTTTAT
GTTTAATATTGTTTTAACATCTAATTTTCATTCAGGGACTGCACTAGATG
CACTGTCTTCAATGCAAAGTTTTCTTCGAAGTAGACCTCAGAAGTTTAGT
TCTCTGAAACAAGCTATTGAATGGAGGTAAATGCTTTAGTATTCAAGGGA
TAGTCAGACGGTTTGAGATATTTAGCCTGCATAAACGTACGTTCTGTGAT
CCTGAGTAGGATATTAAACTTTGTACTTTTAAATCTTTGTACTGATAATT
TTGTCAAAAGAGTGCTTAGGTAAAATCGTAAATTGCATTTGAAAATTTAC
TTTAAAGCTATCTTACAATTTCCTTTCAGTATAAGGTCAGGGCAGCTGAG
GAATCTTACTTCTGCTAAGATATCAATGGCAGGGCAACTAAAAAAGTAAG
TATCGCTGTTAAAATCTTTGATAGAAAACATTTCAGATCTAGCAATTTTA
TCAAACCAAAGTCTTGTGTTGATAAGTATTTTGTTCCAGATGTTATATAT
TTTCATCTGATTTTAGGGTTGAAGGAACGAGCAGTCAATCAAGCAATGTA
TCCTTAGATATTGTTGAAGAAACAGAAGAGGAGGTTGAAAATGAACAAAC
CTCATTTTCCTCAACATCAATAAGCGAGGTATATTATTCTAAGCTTTTTC
ACTTTCAGAAAAATTCCCATTTTAAACTTATTTAAGTAGCAACTTTGTTT
TCATCATTTATACTTTGGTCATTTTGCTTTTTAGGAACAGTCAGAGTATA
CTTGGAGGGTCGATTTAGCAGAAACTGAAAAATATTGGAAAGGTATGGAA
ATTCCTTTGCTGTTGTACATGTTTTTACTTATCGATTTTGATGATTTCAA
ATGATGTGCTGATTTTTTCTTCTCTCGTTGTAGGATGGTTTGAGAATATG
TCATCACTTTTTGTTTCTTGCCCAGTTCCAAAGCTACTTTTACTAGCAGG
TAAAGATTATCTGTGGCCGGAAAGCTCAGTCGGTAGAGCATTTACCTTAC
AATGGTTGTTGGTACCTTCCGGTTCCTCGGTCACCCCCAACTCAGCCAGC
AAATGAGTAGCTTAGATTGGGTAATCTGATCTATGCAGTAACTTACTGGA
AGCTGTAGGTGTGGCCCTCCATCTCAGCATTTGAACTCCCAGGTCTAGTG
TAAATAGAAAAGACTAGACTAGATAGACTCCCTTGCTCTCGGCTCTGCCA
ACAGCCACCTGATGAATATACTTTTACTTTTGTTTTACTTACCTAAAGTT
TATGCAAAAGAAAACATTAAGTCAAGAATTAAAAGTAATGTTTTATTTGC
CAGTGCAACTTTAAATGTCAGTTAACATTAATATATGGTCTTCTTTCTTA
TTGATTCAAACATGCTTTTACATTTCTAGGAATAGATAGACTTGATAAAG
ATCTGACAATAGGTCAAATGCAAGGTATTTTTAGTATTTAAAATTTTTGG
TATTTTATTTATTGAAAATGTATAACGGGAAAATGAGGAATAGGGTATAA
CCTTTAAGACATTGGGCAAAGGAAGAACTCTTTATTTAATGTTTTTAAAA
ATCTATGTCTTATGTTTTATCCATTTTTGTGTTTTCGCATCAAGTAATTT
ATGATATTGTGATATATCAGACAGTGAACTCGTTGGTAAAGCAGAATTAA
CTGGTCCAATGAAAACTTGTGAATCTTCGTATTTTAGGGAAATTTCAGAT
GCAAGTTCTACCTAATTGTGGACATATGGTTCATGAGGATGTACCAGATA
AGGTAAGCATTTGATCTCGTAAACTCAGTGGCAAAGTTCTGTCTTAAATT
CAAGCCTGAAGCTGTCTTTACAAATATGATACTTCACTTACGACGGAAAC
GCATGATTGTAAGAAGATAGGGTTAGAGGCCCAGTGCAGTGTGCCTAACT
GTAAATAAAACTCTATAATAGAATTGACAAACAAATGGAATGATAAGATC
TATAAATTGTAAAGATGTAAGATTGTTTCCTAGAGGTCAATAGACCTGAG
AAATACACTTCTATAAATAAATAAATATTGTGTGAATAGTTTAAATGTTC
TAGGGTTGGTTGGTAAATTTCTTGAAGTCGGTAGAATCATGTTCTATTTC
TAATGGTACTTTAACTTTGAATTAAATTTCTTCTGTAACGATTTTCTTAG
GTTGCAGAAATCCTTACTGCCTTTCTATTGAGACAAAAATTGACTGTGGC
CAAAAGCAATTTTGAAAGGTAAGCTTACTTTAAGTTAATAATTAGGAACA
TTACATGGTCCACCTCCAGTGATTGCTGGAAATTTTAACCTTTTTTTTTT
TTTTTCAGACACACACCATCTTGCTGACATATTCTGGTTCATGTTTTTAT
TTTTTTTTCAAACTTTATAAAAATTGTACATAGTGAAAAGATTTTTAAGT
TATTTTCTAAAATTTCCTGAAATTAGGTATCATCTTTTCTCTTTTTTTTT
CTCATCAAACTTTGCCCATATGCATACTTTGTTTGTCAGTTATATTATAC
CCATGTTGTTAAATCTCATTCCTTTTTATATTAGAAGAGATAGAAAAGTA
TAGTTGAGTAAAATGGCAGCAAAAAGGAAGAAAACATCTGATGGGAATAC
CAGTGCAACAAATAGCAATAAGTCACTGACTGCAACCGATGATATTGAAG
ATTTTGAAAACGAGAGTGATCCTTTCTCCAAGCCATGGGAAGGATCTGAC
GCCATTTTGGTTGTGGAAAACAAGAAGTTATATGTCCATTCCAACATGCT
ATCTTTCTCTTCTCCTGTTTTCAAATCCATGTTCAATTCTGGTTATTTCA
AAGAATCAAAAACTAAAACTGTTGATTTGAAAGGCAAAAAATATGCAGAT
GTTGTGAATCTATTGAAAATGATATACCCTCAGTTTGAAATTGATCTGTG
TAAGTACCTTGGCCATTTTACTTATTCCAAAGTCTACATAGATTACTGAT
AATTACTGTACCTTTCTTCTTTTCTTTGTAAAACTTTTTCTTCAGATATA
TCTCCTATCTGGGGTTGTTAAGATGTCTCTTAACTTTGAAACTTACATTC
TTCTAATATCTGCTCCAACAATTAAGTCAGAAAAAAGGATCCCTAACTTT
GGGATAAAGGGTTGGCTCTAAGAGTTGGTTAGGCTGGGAAGTGAAAGAGT
GGCTACAACACTAGCGACTAATTGACATGGACAATGGTATAAAATACTGA
CAATTCTATACTTTATTATTTAATTGTTTCTCAAGGGATGACAACAATAT
CAGAGCTTCAAGTGATGATGACACTGATCGAAGAATACCTCATTAAGTCA
TTACGTAAAAGAATTGAGGACCACACCCTCTACATTGCCAACATCAAAAT
ACTGAATGGTGGTTATCAAGAAGTTTGTGCTTTGGATCTGATGTTACTGG
CAGATCTGTTTAATTTCAATGATACTATAGACCAATGTGCAAAATATATA
GGTGCTCGATATTATTATACTGACCATTCCAATGAATCGACTTTTTCTAT
GGATACGGACGATGAAGACACCGAGGACAGCCCGTCAATGAAAGAATTTT
TCCAAGTCCATAAATTAACAGATAAAGCCAAATTAAAAATCATGGTCAAC
ATTGGTAAGAAGCATTTAGAGTTTATTGAAGAGGAGAGAGATGATATGTA
TAAAGAAATGATGACTAAGCGAACGCGCGAACATTCCTATTTGAAAAGTG
AGATGTGTCGCAGGAAAATGGAAGATTTGAAGATAGTAATGAATGAAATG
ACGTTATTGATTAAATGAAGATTAATTGGTAGGTTTACTTTTATTCAGAG
AAGCCTGTTCTTTATGGTGTTTCCATCTTCAACCTTATGTTGCTTTCTTT
TAATCGAACGAAATTGTAATGATACGTTTTTGCTTTATCTGGGTAAAAAT
AATTTGAAATTATTTTGCAACCAACTATAACATAGAAAACGTGAATCATG
GAATTCAATATAAATGCAGTATTTTGATGAGAAGGAAAAACAAATTGATG
TGAACAAATTCTTAATTTATGAGACAATGCGCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013112XLOC_013112Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023325-exon-sc0000450-1575043694:258013..258125TCONS_00023325-exon-sc0000450-1575043694:258013..258125Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:257764..257851TCONS_00023325-exon-sc0000450-1575043694:257764..257851Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:257270..257362TCONS_00023325-exon-sc0000450-1575043694:257270..257362Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:256961..257018TCONS_00023325-exon-sc0000450-1575043694:256961..257018Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:256363..256414TCONS_00023325-exon-sc0000450-1575043694:256363..256414Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:256197..256265TCONS_00023325-exon-sc0000450-1575043694:256197..256265Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:255212..255297TCONS_00023325-exon-sc0000450-1575043694:255212..255297Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:254750..254840TCONS_00023325-exon-sc0000450-1575043694:254750..254840Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:254481..254546TCONS_00023325-exon-sc0000450-1575043694:254481..254546Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:254248..254359TCONS_00023325-exon-sc0000450-1575043694:254248..254359Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:254084..254141TCONS_00023325-exon-sc0000450-1575043694:254084..254141Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:253927..253992TCONS_00023325-exon-sc0000450-1575043694:253927..253992Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:253452..253496TCONS_00023325-exon-sc0000450-1575043694:253452..253496Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:253124..253188TCONS_00023325-exon-sc0000450-1575043694:253124..253188Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:252658..252725TCONS_00023325-exon-sc0000450-1575043694:252658..252725Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:251977..252567TCONS_00023325-exon-sc0000450-1575043694:251977..252567Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1575043694:250841..251640TCONS_00023325-exon-sc0000450-1575043694:250841..251640Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:258013..258125TCONS_00023325-exon-sc0000450-1510915933:258013..258125Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:257764..257851TCONS_00023325-exon-sc0000450-1510915933:257764..257851Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:257270..257362TCONS_00023325-exon-sc0000450-1510915933:257270..257362Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:256961..257018TCONS_00023325-exon-sc0000450-1510915933:256961..257018Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:256363..256414TCONS_00023325-exon-sc0000450-1510915933:256363..256414Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:256197..256265TCONS_00023325-exon-sc0000450-1510915933:256197..256265Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:255212..255297TCONS_00023325-exon-sc0000450-1510915933:255212..255297Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:254750..254840TCONS_00023325-exon-sc0000450-1510915933:254750..254840Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:254481..254546TCONS_00023325-exon-sc0000450-1510915933:254481..254546Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:254248..254359TCONS_00023325-exon-sc0000450-1510915933:254248..254359Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:254084..254141TCONS_00023325-exon-sc0000450-1510915933:254084..254141Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:253927..253992TCONS_00023325-exon-sc0000450-1510915933:253927..253992Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:253452..253496TCONS_00023325-exon-sc0000450-1510915933:253452..253496Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:253124..253188TCONS_00023325-exon-sc0000450-1510915933:253124..253188Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:252658..252725TCONS_00023325-exon-sc0000450-1510915933:252658..252725Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:251977..252567TCONS_00023325-exon-sc0000450-1510915933:251977..252567Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1510915933:250841..251640TCONS_00023325-exon-sc0000450-1510915933:250841..251640Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:258013..258125TCONS_00023325-exon-sc0000450-1491911889:258013..258125Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:257764..257851TCONS_00023325-exon-sc0000450-1491911889:257764..257851Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:257270..257362TCONS_00023325-exon-sc0000450-1491911889:257270..257362Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:256961..257018TCONS_00023325-exon-sc0000450-1491911889:256961..257018Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:256363..256414TCONS_00023325-exon-sc0000450-1491911889:256363..256414Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:256197..256265TCONS_00023325-exon-sc0000450-1491911889:256197..256265Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:255212..255297TCONS_00023325-exon-sc0000450-1491911889:255212..255297Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:254750..254840TCONS_00023325-exon-sc0000450-1491911889:254750..254840Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:254481..254546TCONS_00023325-exon-sc0000450-1491911889:254481..254546Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:254248..254359TCONS_00023325-exon-sc0000450-1491911889:254248..254359Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:254084..254141TCONS_00023325-exon-sc0000450-1491911889:254084..254141Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:253927..253992TCONS_00023325-exon-sc0000450-1491911889:253927..253992Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:253452..253496TCONS_00023325-exon-sc0000450-1491911889:253452..253496Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:253124..253188TCONS_00023325-exon-sc0000450-1491911889:253124..253188Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:252658..252725TCONS_00023325-exon-sc0000450-1491911889:252658..252725Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:251977..252567TCONS_00023325-exon-sc0000450-1491911889:251977..252567Clytia hemisphaericaexon
TCONS_00023325-exon-sc0000450-1491911889:250841..251640TCONS_00023325-exon-sc0000450-1491911889:250841..251640Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000450supercontigsc0000450:250841..258125 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.6569	15.4707	11.4221	9.80318	8.9171	7.6831	8.0268	8.02687	8.31671	7.368	6.95299	6.75821	4.96781	4.85158	5.13867	5.60584	7.01232	6.95548	4.2827	4.48721	6.84912	5.92198	11.5197	11.8391	5.34072	5.77672	4.74962	3.33582	5.39819	6.93024
Blast
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BLAST of TCONS_00023325 vs. Swiss-Prot (Human)
Match: PPME1 (Protein phosphatase methylesterase 1 OS=Homo sapiens GN=PPME1 PE=1 SV=3)

HSP 1 Score: 364.385 bits (934), Expect = 4.888e-117
Identity = 182/348 (52.30%), Postives = 246/348 (70.69%), Query Frame = 1 
Query:  133 KDYSPSSWEGYFDKQHDVKV----GENTFRLYTRGTDGPXXXXXXXXXXSALSWAVFTKTLCDMCDCQVAAIDFRGHGDSSTTNDTNMAADVMAYDICHVILNFYDQSPPPIVMMGHSMGGAIAVHIAAKKILPNLSGLAVIDVVEGTALDALSSMQSFLRSRPQKFSSLKQAIEWSIRSGQLRNLTSAKISMAGQLKKVEGTSSQSSN------VSLDIXXXXXXXXXXXXXXXXXXXXXXXXXXYTWRVDLAETEKYWKGWFENMSSLFVSCPVPKLLLLAGIDRLDKDLTIGQMQGKFQMQVLPNCGHMVHEDVPDKVAEILTAFLLRQKLTVAKSNFERHTPSC 1146
            +D+SP  W  YF+   DV+V    G++TFR+Y  G++GPV+LLLHGGGHSALSWAVFT  +     C++ A+D R HG++   N  +++A+ MA D+ +V+   Y   PPPI+++GHSMGGAIAVH A+  ++P+L GL +IDVVEGTA+DAL+SMQ+FLR RP+ F SL+ AIEWS++SGQ+RNL SA++SM GQ+K+ EG +S   +      +  +  E+ E      +        +++   YTWR++LA+TEKYW GWF  +S+LF+SCP+PKLLLLAG+DRLDKDLTIGQMQGKFQMQVLP CGH VHED PDKVAE +  FL+R +       F+   P C
Sbjct:   39 RDFSPVPWSQYFESMEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKSIVEGIIEEEEEDEEGSESISKRKKEDDMETKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHRFAEPIGGFQCVFPGC 386
The following BLAST results are available for this feature:
BLAST of TCONS_00023325 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPME14.888e-11752.30Protein phosphatase methylesterase 1 OS=Homo sapie... [more]
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