TCONS_00023322 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00023322
Unique Name	TCONS_00023322
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2666

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000450:248187..258125-

transcript sequence

>TCONS_00023322 ID=TCONS_00023322|Name=TCONS_00023322|organism=Clytia hemisphaerica|type=transcript|length=2666bp
ATAaagatacaaaaataaaaaacaatgtcTGCAATGCAAAGGGATATCAT
GAAAAGCAAATTACCACCTTTGCCAAGTAAACCTGTTGGTCAAGCATCAA
GATTTTCAAGTCTTGTTCCAAAAAGAAATGTCAAAGATTACTCCCCATCC
TCATGGGAAGGATATTTTGATAAACAGCATGATGTCAAAGTTGGAGAGaa
tACATTTAGGTTATATACCAGAGGTACAGATGGACCAGTAGTCTTACTTC
TTCACGGTGGTGGACATTCAGCACTATCATGGGCAGTCTTTACGAAAACC
CTATGTGATATGTGTGATTGCCAAGTTGCTGCTATTGATTTTCGAGGTCA
TGgagACTCAAGTACAACCAATGATACCAACATGGCAGCTGATGTAATGG
CTTATGATATCTGTCATGTTATACTGAATTTCTATGACCAATCACCACCT
CCAATTGTTATGATGGGCCATAGTATGGGAGGTGCAATCGCTGTTCACAT
CGCTGCAAAAAAGATTCTTCCAAATTTGAGTGGCCTTGCTGTTATAGATG
TAGTGGAAGGGACTGCACTAGATGCACTGTCTTCAATGCAAAGTTTTCTT
CGAAGTAGACCTCAGAAGTTTAGTTCTCTGAAACAAGCTATTGAATGGAG
TATAAGGTCAGGGCAGCTGAGGAATCTTACTTCTGCTAAGATATCAATGG
CAGGGCAACTAAAAAAGGTTGAAGGAACGAGCAGTCAATCAAGCAATGTA
TCCTTAGATATTGTTGAAGAAACAGAAGAGGAGGTTGAAAATGAACAAAC
CTCATTTTCCTCAACATCAATAAGCGAGGAACAGTCAGAGTATACTTGGA
GGGTCGATTTAgcagaaactgaaaaatattgGAAAGGATGGTTTGAGAAT
ATGTCATCACTTTTTGTTTCTTGCCCAGTTCCAAAGCTACTTTTACTAGC
AGGAATAGATAGACTTGATAAAGATCTGACAATAGGTCAAATGCAAGGGA
AATTTCAGATGCAAGTTCTACCTAATTGTGGACATATGGTTCATGAGGAT
GTACCAGATAAGGTTGCAGAAATCCTTACTGCCTTTCTATTGAGACAAAA
ATTGACTGTGGCCAAAAGCAATTTTGAAAGacacacACCATCTTGCTGAC
ATATTCTGGTTcatgttgttttatttttttcaaactttataaaaattgta
catagtaaaaagatttttaagttattttctaaaatttcctaaaattaggT
ATcatcttttctcttctttttctcATCAAACTTTGCCCATGCATTCTTTT
GTCAGTTATATTATATTCATGTTGTTAAATCccattcctttttataatag
aaaaGATAGAAAAGCATAATTGAGTAAAATGGCAGCGAAAAGGAAGAAAA
CATCTGATGGAAATAGCAGCACAACAAATAGTAATAAGTCACTGACCGCA
ACCGATGAtattgaagattttgaaaacgagagTGATCCTTTCTCCAAACC
ATGGGAAGGATCTGATGCCATTTTGGTTGTGGAAAACAAGAAGTTATATG
TCCATTCCAACATGCTATCTTTCTCTTCTCCTGTTTTCAAATCCATGTTC
AATTCTGGTTATTTCAAAGAATCGAAAACTAAAACAGTTGATTTGAAAGG
CAAAAAATATGCAGATGTTGTGAATCTATTGAAAATGATATACCCTCAAT
TTGAAATTGACCTGTGGATGACAACAATATCAGAGCTTCAAGTGATGATG
ACACTGATCGAAGAATACCTCATCAAATCATTACGTAAAAGAATTGAAGA
CCACACCCTCTACATTGCCAACATCAAAATACTGAATGGTGGTTATCAAG
AAGTTTGTGCATTGGATCTGATGTTACTGGCAGATCTGTTTAATTTCAAT
GATACTATAGACCAATGTGCGAAATATATAGGTGCTCGATATTATTATAC
TGACCATTCCAATGAATCGACTTTTTCTATGGATACGGACGATGAAGACA
CCGAGGACAGCCCGTCAatgaaagaatttttccaagtccATAAATTAACA
GATAAAGCCAAATTAAAAATCATGGTCAACATTGGTAAGAAGCATTTAGA
GTTTATTGAAGAGGAGAGAGATGATATGTATAAAGAAATGATGACTAAGC
GAACGCGCGAACATTCCTATTTGAAAAGTGAGATGTGTCGCAGGAAAATG
GAAGATTTGAAGATAGTAATGAATGAAATGACGTTATTGATTAAATGAAG
ATTAATTGGTAGGTTTACTTTTATTCAGAGAAGCCTGTTCTTTATGGTGT
TTCCATCTTCAACCTTATGTTGCTTTCTTTTAATCGAACGAAATTGTAAT
GATACGTTTTTGCTTTATCTgggtaaaaataatttgaaattattttgcaa
CCAACTATAACATAGAAAACGTGAATCATGGAATTCAATATAAATGCAGT
ATTTTGATgagaaggaaaaacaaattgatGTGAACAAATTCTTAATTTAT
GAGACAATGCGCAAGGAATCATTTTACGATCAATCAATCTTTGCTTAATT
TAAATGGTGTTTTTGTTGCCTATTTATGGGctgttttttatttcactttt
gtATATGATATTTTTGTATAGGCTTTTTGTAAACTTAGTAATCATGAGAT
GATGTATATACAAGCA

Run BLAST on NCBI

transcript from alignment at sc0000450:248187..258125-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00023322 ID=TCONS_00023322|Name=TCONS_00023322|organism=Clytia hemisphaerica|type=transcript|length=9939bp|location=Sequence derived from alignment at sc0000450:248187..258125- (Clytia hemisphaerica)
ATAAAGATACAAAAATAAAAAACAATGTCTGCAATGCAAAGGGATATCAT
GAAAAGCAAATTACCACCTTTGCCAAGTAAACCTGTTGGTCAAGCATCAA
GATTTTCAAGTCTGTAAGTTTTTGTTAAAAAATTCTTGAAACATATTTTG
ATGTATTCTATGTTTAATTCTAATTCTGTCCTTTTTAAAATAACCAAATG
CTGTATAAAATGCTACCTGGAATTATTTATCATCATCATCATGATAAGTA
AAATCATTAACTTTAAATTTTCAGTGTTCCAAAAAGAAATGTCAAAGATT
ACTCCCCATCCTCATGGGAAGGATATTTTGATAAACAGCATGATGTCAAA
GTTGGAGAGAATGTATTTTTTCATTTTATTTCGACTATTTACTAACTTCT
TTCGTTATCTGTCGTACCTGTAAAATGAGTGACCCTGGAGACTAACCTTT
GATAAGTTCTTTGTTAGGAAGTAGTGTAAACCTGTCTGAAGACTAATGCA
TTCACTTTTAACTTTCACTTACTCACACTCCTTTAACCCTTTCTCCTTGG
AGTGATAAGGAGTGCTATGCACAACTTTTATTAGTGAAGTCTAAATTTTA
TTGTGTACAACTGATCACCATCCTCAGAGATTTTTGGAGGTGTGTCTGCG
CTAATCCCAACCTCAAATATGCTGCCTGTAGATACAACAACTTCTCTGAT
AAAGTAGATGCTATGTGTTTAAACTTAGAGCTCTAAACTCTTATCTGAAT
TTTCTATTTAAAGACATTTAGGTTATATACCAGAGGTACAGATGGACCAG
TAGTCTTACTTCTTCACGGTGGTGGACATTCAGCACTATCATGGGCAGTC
TTTACGGTATGTTTTGAAGCTTTAGCATCTTTTGATATTGGTTGATAAAT
TATGGTGGGTGAAGTAATGATAATATTAATAACAAATAAAATGTTCTTTA
CTACACCCATTGTCCCACAAAAATTATTCTTTTTCCATCCTTTTAAAAAT
ATCTTGTTTAATAAACAGGTTCGATTATACATTCTCATTGAAGGTTCTTC
AGATTGAAGATTCTTCAAATAGAGTCTAACCCAAGCACATGATCTTCTAA
TTTTTAGAAAACCCTATGTGATATGTGTGATTGCCAAGTTGCTGCTATTG
ATTTTCGAGGTCATGGTAAGTTTTCAACAGGGACAAACTTTCTAGATAAA
TTAATGAATCTGTATAAAAACATTATGGCAAAGCATTTTTATGACTTTTG
TTAGCTCATCCTTTGTTCCAAATGGTACATTGCTTACTTTTTGATCTTAT
TACCACATTCCTTAGTTTAATACTCTTATCAATGATTCTTTGGTACCTAA
TAAACAGGGAGGGGTTGGAACAATTGGTTTTTGTGGAAAGAAATTGCAGC
AGGGTTGGAATAAAAATGTCTTCGGATTTCCATTAATTGATAAATAGGAA
AAACTTGATAGGTCTGAGAGTATTGTTAAAAAAAGTGAACAAAGCAAATT
TAAAAAAAACTTGAACTTTTTAACAATAGAAAATTTCAGACCAGAGATTT
ATTTAAGGTAATGTTGATAAATATTGAAGCATCGTTAGAGCTTTTGATTC
TTATTAATAAAATCTCTTGCTCTTAATCATCAGTGAACTATTTTCTTGGT
TAAAATACTTGATGTGAGTTCTCACTGTTTCTCACTTAGTTATTGTCTTT
TTTGTTTTTAGGAGACTCAAGTACAACCAATGATACCAACATGGCAGCTG
ATGTAATGGCTTAGTATGTAACACTTGATGAATAAGGATAGTGATAATTT
GTAATGTAAGGGTACAATATAATGTTACTTTACAAATGCATTTACTTCTG
TTCTTTTTAGTGATATCTGTCATGTTATACTGAATTTCTATGACCAATCA
CCACCTCCAATTGTTATGATGGGCCATAGGTATGTGTAAGAATATTTTTT
AATGTAGTAATTATTTGTTTTTTTGAAACTTTTAGTTTTTTGACCTACCC
CGGTGGGGTGGAGGTCCTATAAATTAACCCATGTTCGTTCGTTCGTTAGT
TAGTGTGTTAGTTACCAGCTTTTCTCGAGATTGGCTCATTAGTTTTTTCT
GATTTTTGGCACAAAGGTGCATGACCATAAACCCTCAAATGTGACGGAGC
CCGATTTTCTAAAAAAAAATTTTTTANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTTTTT
TTGTATTTTGACCAGTTATGTCTTATGTGTTTCATTGTTTCAATGTTCAC
TGATTAGTTTGATAACCAGGTAGGTCCATAAAAGTATCGCTTGTTCTATA
TTATGTTTATTCTTCTAGCACTGAGGTAGCACACAGCTTACAAAAGATCT
TTCTTTTTCCTATCGGCTTTTTTTTTAGTATGGGAGGTGCAATCGCTGTT
CACATCGCTGCAAAAAAGATTCTTCCAAATTTGAGTGGCCTTGCTGTTAT
AGATGTAGTGGAAGGTTGTGATTTTTCTTTGTTATTATTTGTAATTATTT
CAGACTAATTTTGCTAAGGAAGCTTTTGAAAGTACGACTGTTATTTCAAA
ATCAGCTTTTTAAAAAAGGGGTTATTACATTGGTCATGCCGTGTACACTT
ATATCATGATTTATTGGATCGTCTGATTTATTGGATATTTGTTTCATATA
AGTTTTTTTGACATCCATCAATTACATCAAATCTTTGAAAAACTGGACAT
GTAAATCTATCGAATTCTTTCCCAAAACGAGATATGTTTCCATGTTATAA
TGTAACAAATCAACTTTTCATCCAATGAACTATGTTCAGTATTGTTTTAT
GTTTAATATTGTTTTAACATCTAATTTTCATTCAGGGACTGCACTAGATG
CACTGTCTTCAATGCAAAGTTTTCTTCGAAGTAGACCTCAGAAGTTTAGT
TCTCTGAAACAAGCTATTGAATGGAGGTAAATGCTTTAGTATTCAAGGGA
TAGTCAGACGGTTTGAGATATTTAGCCTGCATAAACGTACGTTCTGTGAT
CCTGAGTAGGATATTAAACTTTGTACTTTTAAATCTTTGTACTGATAATT
TTGTCAAAAGAGTGCTTAGGTAAAATCGTAAATTGCATTTGAAAATTTAC
TTTAAAGCTATCTTACAATTTCCTTTCAGTATAAGGTCAGGGCAGCTGAG
GAATCTTACTTCTGCTAAGATATCAATGGCAGGGCAACTAAAAAAGTAAG
TATCGCTGTTAAAATCTTTGATAGAAAACATTTCAGATCTAGCAATTTTA
TCAAACCAAAGTCTTGTGTTGATAAGTATTTTGTTCCAGATGTTATATAT
TTTCATCTGATTTTAGGGTTGAAGGAACGAGCAGTCAATCAAGCAATGTA
TCCTTAGATATTGTTGAAGAAACAGAAGAGGAGGTTGAAAATGAACAAAC
CTCATTTTCCTCAACATCAATAAGCGAGGTATATTATTCTAAGCTTTTTC
ACTTTCAGAAAAATTCCCATTTTAAACTTATTTAAGTAGCAACTTTGTTT
TCATCATTTATACTTTGGTCATTTTGCTTTTTAGGAACAGTCAGAGTATA
CTTGGAGGGTCGATTTAGCAGAAACTGAAAAATATTGGAAAGGTATGGAA
ATTCCTTTGCTGTTGTACATGTTTTTACTTATCGATTTTGATGATTTCAA
ATGATGTGCTGATTTTTTCTTCTCTCGTTGTAGGATGGTTTGAGAATATG
TCATCACTTTTTGTTTCTTGCCCAGTTCCAAAGCTACTTTTACTAGCAGG
TAAAGATTATCTGTGGCCGGAAAGCTCAGTCGGTAGAGCATTTACCTTAC
AATGGTTGTTGGTACCTTCCGGTTCCTCGGTCACCCCCAACTCAGCCAGC
AAATGAGTAGCTTAGATTGGGTAATCTGATCTATGCAGTAACTTACTGGA
AGCTGTAGGTGTGGCCCTCCATCTCAGCATTTGAACTCCCAGGTCTAGTG
TAAATAGAAAAGACTAGACTAGATAGACTCCCTTGCTCTCGGCTCTGCCA
ACAGCCACCTGATGAATATACTTTTACTTTTGTTTTACTTACCTAAAGTT
TATGCAAAAGAAAACATTAAGTCAAGAATTAAAAGTAATGTTTTATTTGC
CAGTGCAACTTTAAATGTCAGTTAACATTAATATATGGTCTTCTTTCTTA
TTGATTCAAACATGCTTTTACATTTCTAGGAATAGATAGACTTGATAAAG
ATCTGACAATAGGTCAAATGCAAGGTATTTTTAGTATTTAAAATTTTTGG
TATTTTATTTATTGAAAATGTATAACGGGAAAATGAGGAATAGGGTATAA
CCTTTAAGACATTGGGCAAAGGAAGAACTCTTTATTTAATGTTTTTAAAA
ATCTATGTCTTATGTTTTATCCATTTTTGTGTTTTCGCATCAAGTAATTT
ATGATATTGTGATATATCAGACAGTGAACTCGTTGGTAAAGCAGAATTAA
CTGGTCCAATGAAAACTTGTGAATCTTCGTATTTTAGGGAAATTTCAGAT
GCAAGTTCTACCTAATTGTGGACATATGGTTCATGAGGATGTACCAGATA
AGGTAAGCATTTGATCTCGTAAACTCAGTGGCAAAGTTCTGTCTTAAATT
CAAGCCTGAAGCTGTCTTTACAAATATGATACTTCACTTACGACGGAAAC
GCATGATTGTAAGAAGATAGGGTTAGAGGCCCAGTGCAGTGTGCCTAACT
GTAAATAAAACTCTATAATAGAATTGACAAACAAATGGAATGATAAGATC
TATAAATTGTAAAGATGTAAGATTGTTTCCTAGAGGTCAATAGACCTGAG
AAATACACTTCTATAAATAAATAAATATTGTGTGAATAGTTTAAATGTTC
TAGGGTTGGTTGGTAAATTTCTTGAAGTCGGTAGAATCATGTTCTATTTC
TAATGGTACTTTAACTTTGAATTAAATTTCTTCTGTAACGATTTTCTTAG
GTTGCAGAAATCCTTACTGCCTTTCTATTGAGACAAAAATTGACTGTGGC
CAAAAGCAATTTTGAAAGGTAAGCTTACTTTAAGTTAATAATTAGGAACA
TTACATGGTCCACCTCCAGTGATTGCTGGAAATTTTAACCTTTTTTTTTT
TTTTTCAGACACACACCATCTTGCTGACATATTCTGGTTCATGTTTTTAT
TTTTTTTTCAAACTTTATAAAAATTGTACATAGTGAAAAGATTTTTAAGT
TATTTTCTAAAATTTCCTGAAATTAGGTATCATCTTTTCTCTTTTTTTTT
CTCATCAAACTTTGCCCATATGCATACTTTGTTTGTCAGTTATATTATAC
CCATGTTGTTAAATCTCATTCCTTTTTATATTAGAAGAGATAGAAAAGTA
TAGTTGAGTAAAATGGCAGCAAAAAGGAAGAAAACATCTGATGGGAATAC
CAGTGCAACAAATAGCAATAAGTCACTGACTGCAACCGATGATATTGAAG
ATTTTGAAAACGAGAGTGATCCTTTCTCCAAGCCATGGGAAGGATCTGAC
GCCATTTTGGTTGTGGAAAACAAGAAGTTATATGTCCATTCCAACATGCT
ATCTTTCTCTTCTCCTGTTTTCAAATCCATGTTCAATTCTGGTTATTTCA
AAGAATCAAAAACTAAAACTGTTGATTTGAAAGGCAAAAAATATGCAGAT
GTTGTGAATCTATTGAAAATGATATACCCTCAGTTTGAAATTGATCTGTG
TAAGTACCTTGGCCATTTTACTTATTCCAAAGTCTACATAGATTACTGAT
AATTACTGTACCTTTCTTCTTTTCTTTGTAAAACTTTTTCTTCAGATATA
TCTCCTATCTGGGGTTGTTAAGATGTCTCTTAACTTTGAAACTTACATTC
TTCTAATATCTGCTCCAACAATTAAGTCAGAAAAAAGGATCCCTAACTTT
GGGATAAAGGGTTGGCTCTAAGAGTTGGTTAGGCTGGGAAGTGAAAGAGT
GGCTACAACACTAGCGACTAATTGACATGGACAATGGTATAAAATACTGA
CAATTCTATACTTTATTATTTAATTGTTTCTCAAGGGATGACAACAATAT
CAGAGCTTCAAGTGATGATGACACTGATCGAAGAATACCTCATTAAGTCA
TTACGTAAAAGAATTGAGGACCACACCCTCTACATTGCCAACATCAAAAT
ACTGAATGGTGGTTATCAAGAAGTTTGTGCTTTGGATCTGATGTTACTGG
CAGATCTGTTTAATTTCAATGATACTATAGACCAATGTGCAAAATATATA
GGTGCTCGATATTATTATACTGACCATTCCAATGAATCGACTTTTTCTAT
GGATACGGACGATGAAGACACCGAGGACAGCCCGTCAATGAAAGAATTTT
TCCAAGTCCATAAATTAACAGATAAAGCCAAATTAAAAATCATGGTCAAC
ATTGGTAAGAAGCATTTAGAGTTTATTGAAGAGGAGAGAGATGATATGTA
TAAAGAAATGATGACTAAGCGAACGCGCGAACATTCCTATTTGAAAAGTG
AGATGTGTCGCAGGAAAATGGAAGATTTGAAGATAGTAATGAATGAAATG
ACGTTATTGATTAAATGAAGATTAATTGGTAGGTTTACTTTTATTCAGAG
AAGCCTGTTCTTTATGGTGTTTCCATCTTCAACCTTATGTTGCTTTCTTT
TAATCGAACGAAATTGTAATGATACGTTTTTGCTTTATCTGGGTAAAAAT
AATTTGAAATTATTTTGCAACCAACTATAACATAGAAAACGTGAATCATG
GAATTCAATATAAATGCAGTATTTTGATGAGAAGGAAAAACAAATTGATG
TGAACAAATTCTTAATTTATGAGACAATGCGCAAGGAATCATTTTACGNT
TCTAGGAATAGATAGACTTGATAAAGATCTGACAATAGGTCAAATGCAAG
GTATTTTTAGTATTTAAAATTTTTGGTATTTTTGAAAATGTATAACATGT
TTTATTGCTTCTCCCAGGAAAATGAGGAATAGGGTTTTAACTTATATGAA
ATTGGGCAAAGGAAGAACTCTTTTTTGATGTATTTAAAAATTTATATCTT
ATGTTTTATCCATTTTTGTGTTTTTGCATCAAGTAATTTATGATAGTGTG
ATACATCAAACAGTGAACTCGATGGTAAATTGGAATTAACTGGTCCAATG
AAAACCTGTGAATCTTCGCATTTTAGGGAAATTTCAGATGCAAGTTCTAC
CTAATTGCGGACATATGGTTCACGAGGATGTGCCAGATAAGGTAAGCATT
TGATCTTGTACACTCTGTAGCAAAATTCTATCTTAAATTCATACCTTTTA
AAGGCTGTCTTCACAAATATGATATTTCACATTGTGTACATTCCCTAGGG
TCGGTTGGTAAATTTCCTGAAGTCGGTAGAATCCTGTTCTGTTTCTAATG
GCACTTAAACTTTGAATTAAATTTCTTTTGTAACGATTTTTTAGGTTGCA
GAAATCCTTACTGCCTTTCTATTGAGACAAAAATTGACTGTGGCTAAAAG
CAATTTTGAAAGGTAAGAAATCTGCTTACTTTAAATTAATTAATTAGGAA
TCATTACATGGTCCACCTCCAGTAATTGCTGGAAATTTTAACCTTTTTAT
TATTTTTTTTCAGACACACACCATCTTGCTGACATATTCTGGTTCATGTT
GTTTTATTTTTTTCAAACTTTATAAAAATTGTACATAGTAAAAAGATTTT
TAAGTTATTTTCTAAAATTTCCTAAAATTAGGTATCATCTTTTCTCTTCT
TTTTCTCATCAAACTTTGCCCATGCATTCTTTTGTCAGTTATATTATATT
CATGTTGTTAAATCCCATTCCTTTTTATAATAGAAAAGATAGAAAAGCAT
AATTGAGTAAAATGGCAGCGAAAAGGAAGAAAACATCTGATGGAAATAGC
AGCACAACAAATAGTAATAAGTCACTGACCGCAACCGATGATATTGAAGA
TTTTGAAAACGAGAGTGATCCTTTCTCCAAACCATGGGAAGGATCTGATG
CCATTTTGGTTGTGGAAAACAAGAAGTTATATGTCCATTCCAACATGCTA
TCTTTCTCTTCTCCTGTTTTCAAATCCATGTTCAATTCTGGTTATTTCAA
AGAATCGAAAACTAAAACAGTTGATTTGAAAGGCAAAAAATATGCAGATG
TTGTGAATCTATTGAAAATGATATACCCTCAATTTGAAATTGACCTGTGT
AAGTATATTGGTTATTTTACTTTATTCCAAAGTGATAAATTCTGTATCTT
TCCTTTTCTTGGTAAAACTTTTTCTCCAAATAAATCACCTACCTAGGGGT
CTTAAGATGTCTCTTAACTTTGAAAAATGCATTTTTCTAAAGTCTGCTTT
TCCCTAACTCCAAAAATGAAGTCCGAAAAAAGGATCCCTAACTTTGTGAA
AAAGGGTTGGCTCTAAGATAAGAGTTGGTTAGGCTGGAAAGTGAAAGAGT
GGCTACTGCAGCACTAGCGACTAATTGACATGGGCAATGGGTATCAAATA
CGGACAATTCTATACTTATTATTTAATTGTTTCTCAAGGGATGACAACAA
TATCAGAGCTTCAAGTGATGATGACACTGATCGAAGAATACCTCATCAAA
TCATTACGTAAAAGAATTGAAGACCACACCCTCTACATTGCCAACATCAA
AATACTGAATGGTGGTTATCAAGAAGTTTGTGCATTGGATCTGATGTTAC
TGGCAGATCTGTTTAATTTCAATGATACTATAGACCAATGTGCGAAATAT
ATAGGTGCTCGATATTATTATACTGACCATTCCAATGAATCGACTTTTTC
TATGGATACGGACGATGAAGACACCGAGGACAGCCCGTCAATGAAAGAAT
TTTTCCAAGTCCATAAATTAACAGATAAAGCCAAATTAAAAATCATGGTC
AACATTGGTAAGAAGCATTTAGAGTTTATTGAAGAGGAGAGAGATGATAT
GTATAAAGAAATGATGACTAAGCGAACGCGCGAACATTCCTATTTGAAAA
GTGAGATGTGTCGCAGGAAAATGGAAGATTTGAAGATAGTAATGAATGAA
ATGACGTTATTGATTAAATGAAGATTAATTGGTAGGTTTACTTTTATTCA
GAGAAGCCTGTTCTTTATGGTGTTTCCATCTTCAACCTTATGTTGCTTTC
TTTTAATCGAACGAAATTGTAATGATACGTTTTTGCTTTATCTGGGTAAA
AATAATTTGAAATTATTTTGCAACCAACTATAACATAGAAAACGTGAATC
ATGGAATTCAATATAAATGCAGTATTTTGATGAGAAGGAAAAACAAATTG
ATGTGAACAAATTCTTAATTTATGAGACAATGCGCAAGGAATCATTTTAC
GATCAATCAATCTTTGCTTAATTTAAATGGTGTTTTTGTTGCCTATTTAT
GGGCTGTTTTTTATTTCACTTTTGTATATGATATTTTTGTATAGGCTTTT
TGTAAACTTAGTAATCATGAGATGATGTATATACAAGCA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_013112	XLOC_013112	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000450	supercontig	sc0000450:248187..258125 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1.71116e-10	0	0	0	0	0

Blast

[Close]

BLAST of TCONS_00023322 vs. Swiss-Prot (Human)
Match: PPME1 (Protein phosphatase methylesterase 1 OS=Homo sapiens GN=PPME1 PE=1 SV=3)

HSP 1 Score: 364.385 bits (934), Expect = 1.455e-116
Identity = 182/348 (52.30%), Postives = 246/348 (70.69%), Query Frame = 1

Query:  133 KDYSPSSWEGYFDKQHDVKV----GENTFRLYTRGTDGPXXXXXXXXXXSALSWAVFTKTLCDMCDCQVAAIDFRGHGDSSTTNDTNMAADVMAYDICHVILNFYDQSPPPIVMMGHSMGGAIAVHIAAKKILPNLSGLAVIDVVEGTALDALSSMQSFLRSRPQKFSSLKQAIEWSIRSGQLRNLTSAKISMAGQLKKVEGTSSQSSN------VSLDIXXXXXXXXXXXXXXXXXXXXXXXXXXYTWRVDLAETEKYWKGWFENMSSLFVSCPVPKLLLLAGIDRLDKDLTIGQMQGKFQMQVLPNCGHMVHEDVPDKVAEILTAFLLRQKLTVAKSNFERHTPSC 1146
            +D+SP  W  YF+   DV+V    G++TFR+Y  G++GPV+LLLHGGGHSALSWAVFT  +     C++ A+D R HG++   N  +++A+ MA D+ +V+   Y   PPPI+++GHSMGGAIAVH A+  ++P+L GL +IDVVEGTA+DAL+SMQ+FLR RP+ F SL+ AIEWS++SGQ+RNL SA++SM GQ+K+ EG +S   +      +  +  E+ E      +        +++   YTWR++LA+TEKYW GWF  +S+LF+SCP+PKLLLLAG+DRLDKDLTIGQMQGKFQMQVLP CGH VHED PDKVAE +  FL+R +       F+   P C
Sbjct:   39 RDFSPVPWSQYFESMEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKSIVEGIIEEEEEDEEGSESISKRKKEDDMETKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHRFAEPIGGFQCVFPGC 386

The following BLAST results are available for this feature:

BLAST of TCONS_00023322 vs. Swiss-Prot (Human)

BLAST of TCONS_00023322 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PPME1	1.455e-116	52.30	Protein phosphatase methylesterase 1 OS=Homo sapie...	[more]

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TCONS_00023322 (transcript) - C. hemisphaerica