TCONS_00023242 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023242
Unique NameTCONS_00023242
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2234

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023242 ID=TCONS_00023242|Name=TCONS_00023242|organism=Clytia hemisphaerica|type=transcript|length=2234bp
TCCCCCAGGGgggtttccacaattttcagctTCTGACCTTAAAATTGTGT
AGAAAAACTCTTAATACgtaaaattttaacaagaaaACTTACTTCTGAAG
ACTTCAACCCAAAAATAGCTGTTAACGCCCTGCCCTACTGTTAATGCTAG
AAAATAGCTTCTTGCAGTAGAGAAGATTCTATTTCCCTCAATTAAATTAA
TAGTTGTGtggaaaaaaaacaagtatAATTCTTACCCTAACTAAATTAGT
TGACCCAATAACACTTCGAAATATCCTGCCAGAcgtcgccattttgaatt
ttgcacATGAGCAAAATTATGTTACGTAATTTActcaaagaaaaactttt
cgTGAGCAAAGTAGATAAAAGGTTATCATTCagtaaagaaattgtaaaaa
tttgtatATTTCTCAAATTGAAACTTTTAATTCCTCCTAAATACAATTTG
AATAAAGTTTGGTTCagtattttcttttcatttagtCATTACTGGTGAAA
ATCTGTGTAAAAGCGAGGATTTATTGACGGTAGCTCTACTTTGCTCCTTA
TGTCCATTCTTTTGTAATTTGCgtaacaaattttttttcaaaacaaacca
ggAACATGGCTTCAGCTGGAAGGTTTATGCGACAGTCCCAAAATTTTGCA
AGGCATGTTGGAAATTCATTGaaATCGAaccaaaacaaattttcttcaaG
TGCAATTGGAAACCTAAAGAAAACAGCAAGATGCTCAATGGTAACGAAGG
CTTTAGGTGGACAGCAACAAAGTGCATTGATGAATGCAGCAAGTAAAATG
GAAATGCGACAATTACAAAAGTCGGTGGCCGTCATGAGCCTGTCATCAAA
GGTGTCAGCATGCATGGATATTTGTGTCCCAGCTGATAGTGATGTCAGTG
AAAGCTCCGAAGATGCGGAAGATGTTTGCTCTCAACCAGGTCATAAACAC
AAACGCATATGATGATGACAACAATGGTTTTGTGTAGTGAATAAGCTCta
ctgtaacttggtctaatgtcgacatccctcctctaattccgacaccctct
ttatcagctgaaattgatagaaaaggttaaaactattttctttgCTCAGT
GGTCGAGATGtcctggagtttttataagatacttcactaattggtcattt
aaagtaatagagatgacgcgttctttagaaaaagtaaaaaaattgttttg
ttacAGGCTAACGACCGACCAAATCAAGAAAGAGCTTTTAacaactccag
cttgtccccagtggtcagagaggaataatcctttttcaatcagcgattca
agctttcatattattcctgtctctaaagaagggtgtcggaattagacgag
ggatgtcgatattagaccagcTTACGGTAGTTTAGACGGCTCACCTTTCG
CCCTGCGTATTCTAATTGTAAGAGTAGGCACAAAGTGAGCAGTTAATTTC
TTTgcttcaaaaagtttgaaagaggACAGTGCATTGACATCAAAAGAGgc
caatgcattgactttagacagcccactttatgcttGCCTttattcacaat
tagaataggcagggcgaaaagtgggacgtctaaactagagctaagatTTC
AAATCTACAATTAATAACAAGTACATTTGCATAATCTACTGTATGCCCAT
ACATATAATGTATTTAGAAATACCAGACTGCAAATATGATTGGATAGTAA
ATTTCTATTCACAAAGAACTACAAGAGTGGAATTGGACTGCTTTGTTTGG
TGTGACGAAAATGTTATATGGCGATTAAAAATATGAGAGTCAACTCTGGA
ACTTTTtgttcaaataatattttttataactAGAAATAAGGATGGACTTT
GGATGAAacttaatttgtaaaaaattattttgggacATTTTCGCAGCTGT
TAAATTGTACTCTCAAAACTAGGCTTCTTACACTTTCAAACCAATTGGgc
aactaaaatatttttttatgcaTACTCTATTCTAAAATTGTTTCAAATGT
GAAAGCTATAATACTGTCTCAGCATAGTCATCGGCCTGCTATAAGCACCC
TTCACACTTCAGATTGCgtagtttttatattttaatgattttggATTATA
TTAttgtataaaaacaaagcttAGTACAGTTAGTAGgatatattttaatt
ttcaaaggtaaaacttatttttattaatgataGTAAAAGAGCTTTAAACA
AAAAGCATTCTTGTTCCAAATCCCAAAATCAATC
Run BLAST on NCBI

protein sequence of TCONS_00023242-protein

>TCONS_00023242-protein ID=TCONS_00023242-protein|Name=TCONS_00023242-protein|organism=Clytia hemisphaerica|type=polypeptide|length=118bp
MASAGRFMRQSQNFARHVGNSLKSNQNKFSSSAIGNLKKTARCSMVTKAL
GGQQQSALMNAASKMEMRQLQKSVAVMSLSSKVSACMDICVPADSDVSES
SEDAEDVCSQPGHKHKRI
Run BLAST on NCBI

transcript from alignment at sc0000447:231846..243243-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023242 ID=TCONS_00023242|Name=TCONS_00023242|organism=Clytia hemisphaerica|type=transcript|length=11398bp|location=Sequence derived from alignment at sc0000447:231846..243243- (Clytia hemisphaerica)
TCCCCCAGGGGGGTTTCCACAATTTTCAGCTTCTGACCTTAAAATTGTGT
AGAAAAACTCTTAATACGTAAAATTTTAACAAGAAAACTTACTTCTGAAG
ACTTCAACCCAAAAATAGCTGTTAACGCCCTGCCCTACTGTTAATGCTAG
AAAATAGCTTCTTGCAGTAGAGAAGATTCTATTTCCCTCAATTAAATTAA
TAGTTGTGTGGAAAAAAAACAAGTATAATTCTTACCCTAACTAAATTAGT
TGACCCAATAACACTTCGAAATATCCTGCCAGACGTCGCCATTTTGAATT
TTGCACATGAGCAAAATTATGTTACGTAATTTACTCAAAGAAAAACTTTT
CGTGAGCAAAGTAGATAAAAGGTTATCATTCAGTAAAGAAATTGTAAAAA
TTTGTATATTTCTCAAATTGAAACTTTTAATTCCTCCTAAATACAATTTG
AATAAAGTTTGGTTCAGTATTTTCTTTTCATTTAGTCATTACTGGTGAAA
ATCTGTGTAAAAGCGAGGATTTATTGACGGTAGCTCTACTTTGCTCCTTA
TGTCCATTCTTTTGTAATTTGCGTAACAAATTTTTTTTCAAAACAAACCA
GGAACATGGCTTCAGCTGGAAGGTTTATGCGACAGTCCCAAAATTTTGCA
AGGCATGTTGGAAATTCATTGGTAAGTTATTCTATAGATCCTATGTTTAT
ATTCCCGAGGTTCTCGATCTCAATGTTGTCTAGGTCATACTTCTTCTTCA
ACCATTTTTCTTCTTCCTATAAATCAATTTCTGGCTGACTTTTCGGGAAA
TTTTCCGCTAACTTATCCTGCTGCTGGGATAACTGAATATGAATTGGAAA
GAGTCTTTTTCAAATCTGGGTTTCACTTACAAAACTGCCTCACTTTCTGA
AGCATATTCTCAACTACTATTGGAGTCCCGTCTTTTCCGGGCCACTTTCT
GCAATTTTGAACTTGAAAAAGTCCCAAACATGATGATGCAACTCCAGAAG
ATTTTTCAAATTTTAATTTTTTTCTCAAAACCTATCCTATCTTGTAGAGC
TTTGAAAAAGAAAGAAAATGAGGGGTCATAGGCCTCTAGAGGANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAA
GCAATTTTCCAGTCATGCTTCTTCAATTTTGCATATCTCTTTTTCTAGTT
TAGCTAGAGACCTGAAATTTGGAGGGAGAATTCTTTGATGGTGTTAGAAT
ATTATTATATAAAAATATTTGTAAAATATTTAGTATATTTATCAAAATAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGTTTGACGT
CAACGAAAGTTGCGTGACTTCTGGAGTCGCTAATGATGAGGTGGACTTAA
AAATATTTTCGTTTCCGGTCCACCAGGTGGGTAATTGAAGTTACAAAGAA
AGCGAGTGGATAAACTGAGGTTTAAAGATGTTCTTTCAAGTGACAAAAAA
AAGCAAGTGGGTAAATTGAGGTTTAGAAGCTGAAGAGACGTTTGTTTAAA
GTGAAGAAAAAAGCAAAGTGGATAAACTGAGGTTTAGAGACATTCATTAA
AGTTACAAAAAAAAAAGAGTCTGTCAAAGGCAGGGGTGTAAAAGTCTTTT
GTCCCCCTCACAACCTGGCCAGTCAGCTTCAACATTTTTTTAAGGGGGGA
AAAGCACAAATTTTTCCAAGACTAATATCCTTTGCGAATCGAACACTAGA
GAAGACCAGACAGTGTCAATCGAACAACTTCGAAGGAAAATCGCAATCGA
ACCAATCGAACGTAATCGAATGAGATCAAATAATTGCGATTCAATTGTCG
AACGCAATCGAATCTCAATCGAACCAGCCGATTCTTACTTGGGTAATATT
CGATTGTGTTCGATTGGTTCGATTGATTGTAAATTACCTTCGCTTATGTT
TGATTACAATTATGTTTGATAAGTTTGATTGCGATTAAATTAAATTTGAT
CACTCCTTTAGAGTTTTTTTAGCGTGGACAGCCGAGCGTGTAAGTACGAT
ACGAGAGTGAATAAAATCGAATACAATTGAATCAATCGAATGCAATCAAA
CATAATCGTTACAATCGAACGGCAAATCCTGGGTAATATTCGATTACGAT
TCGATTGCGGTTGACAATTGAATCGCAATTATTCGATTGTGTTCAATTGC
ATTCAATTGATTCGGCGTTCAATTCATTCCATTGACACCGTCTGGAGAAG
AAAACTAACTGTAGTTACTTACATTTATTAGTAGGGGTCACTATCTAGCG
AAAAAGCTTTCCGTGTGCAGCAGTTTGTGCAAAGGGATTTTATGATTGAA
TATTGTTCCTTGAATGTAGAAGATCAAAATTTGAGAGGTGGGGCTGGGTG
TGACCACCCATTGCTATGGAAACTGACGTCATTGGTTACTATGGCAACCA
AAATAAAAAATCGTCAAAATTGAAAATTTTTTTGTTCCATTCGAAAGAGC
GTGAAAAACTGATAAAGAAAAAGGTCACAACCTATATCTGAAAATTAATA
TATCAGGAGATATTAAGGAAATAAGGCAAAATGATGTCATAAAACGATGA
CGTCATCGAAAAATTAAAATTTGCCAAAATTCAAAATTTTTGGCTTTTGG
GAAAGATTACCTTCCAGTGAACATAAAATATTATTACGAAAAGGTCTGAA
AATCCTCTTTAAGAAGTCTATATTAGCCAAAATTGATATTTTTTAATTTT
GCCTGTAACGTGCTGGGCTGCGCGTACCCTAAGCTCCAACCTTTGACAGG
CAAAAATTGAAAATATCAATTTTGGCCAATAGACTTTTTTTAAGGAATTT
TCAAACGTTTTCGTAATAATATTTTATGTTCACTGGGAGGGTCTTCTTTC
CAAAAAACCAAAAATTTTCGAATTTTGGCAAACTTTTATTTTTCGATGAC
GTCATCATTTTATATACCCCTTAAAATAGGTACCGTGAGTGGTCATAAAT
CCGACAGCCCTGCCTAATTCTGACCCCCAAATAACTGTTATGAAAAAAAT
TCTATGTTTACAAACATTCCCTCTCCAAGTTGAACGATAAACTATTGCAA
GAGCTCTCGAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAAACAAAACATCTAA
CAAGATGGCTATAATGTCAAGATGCCAATTAATGTAATTTAAAAAGTGTG
AATTGTAAAAAATAATTACTTTTTATGATGCTGCTACTGCTGTTGTCATT
TATGACGTTGTACATATTGCAATAAAAAAATTATTTTGTATAGGAAGCAA
TTACTGTATTGTTATTTATATTTGGTTCAATTTGGTTCAAATCTCTCAGT
TTAGTTGACACTTTGGTATCTTCGTTGCGTCACAGCGAAAGGTTTGTTTT
CATTTTATAGTTTGTATCTTTGAAAGACCCCATCGGATTTAGGCAGCGCT
GTCGGATTTAGGACCACTCACGGTATACCACCCCTTAGTAGCCGGTACAA
TCTTGATATCTCCATCAAGAAATGACACACCCACCGTTAAGTACTCTGTA
CTAAGTTGATTTTCCCCCTCAAAAGGTATACCACCCTTTAATTCTTAGTA
ATGGTATTTTCTGGTACACGTCGTTTAAATTTTCTAAAAAACTTCCTTTT
TTTCCATAATTTTTTATGGAAATTTCAAACTCATTAATTAAAGCTCTTGA
AAAACTATATAGAAGACTTTTAGGCAAGTATGGCTGATTTCTGTACTGAA
TGATGTAGAAGTGCCATTTTAATATTTATAAGCAATTTATGACCAAAATG
AGGGAGAAACCACCACTTCTTCATCAAATAACTCCGGTTCAGTACAGAAA
TCGGCCATACTCGCTTAAAAGTTTCCTACATAGTTTTTCAAGAGCTTTCA
GATTCTATAATTGATTTTGGCCTATAATGAGTCTGAAATTTCTATAAAAA
ATGAGCTCTTGGGCTTTACCCTAGGTTTTCAATAAATGGGTCCAGAAATA
AAGGGCTACTCTTAGTTGCCAAATAAACAGGGGGTTCAAATAAACGGGGG
GTGTTGGAAAATTTTTGAGATTTTAATAAACGGGGGCACCTAATTGCCAG
GGGGGTTGGAAATTGTACTTCTGAAAACCCAAAAATAAGGGACACTATAA
GGGGCCTTCTCTTTGACAGCTGAAAATATTTCTAAAAATTAATAAACAGG
GAGCAATAAGCAAAAAGCTTGTCCCAGCTGTTGAAAAAACCACTTAAAGC
ACTAGCTCTCACCCAACAAAATTGTGGATTTTAAAAATTAGATATTCAGA
TATTCGCTTTCAATGATATATAACATCATGGGGTTTTGTGAATGTGCTGG
AAAGATATTGGTTCTTGAAAGGTCAATAAATTGCCCATTTTGGCTTAAAA
TTTGATGAAACAATGAAAATCACAAATATGAATAATATATTATTCTCATC
GTATTTCAACATATTACCATCAAAACAATTATCAAATATTTCCCAAGGCA
TGTATTTTCGAAAATCAAAAATCATATACTAAAAAATTAGCAATGTTTAA
AAAATATGGACATTTTTGGAAAAAAATGAGAATGAAACATTTTTGAAAAC
AAATCTGTTAGTATTTTTCCCTTGGCTGTTTTTAAGGTATGACTTAGTCT
AAAATTAAATTTTAGCAGCTAAATATTACCAGATGACTTGTTTGAACATG
TCATATAAACATCAAGTTGATTGATGAGCAAGTTTTGGTGAAAAGATAAT
TTTAAAACGCCAACCTAGATTTTCCATCACGGCGCAACGCAAACTTTAAA
GGGTTGGAAAATTTTCGAAAAATTAACAAGCGGGGGGGGGGCGTTTATTT
GGCACCTAAGAGTACCTTTAACATTTTTCTGGGCTGCCCTTCTAATATCA
ATCCACAGGGTATTAGGCATGCCTGGTCCAAATTTGGTGCTTTTTCTAAA
TTTGCATGATAATTACACCAATCAGGCCTGCTATGATAACACCCAGGGGA
AAACAAAAAACAAAAGTTTAATAAATAATAAACGTGATAAACATCCTAAT
AAAATGGTAAGAAATAAATATAGACTGCCTATAATAAGAATTTCTTTGTG
ATTTTTTTAGGATTTTGAGTACCAGAATACTAACTTGATGCATCATATTT
GGTATTGAGACCACCGTTTAAGTCCCTTGGTACAAAGTTGAAAAAAAGTT
TTTTTCAATTAGGATCACCACTTAGTACAATGTACTAAGTTGTTTTTCAC
TACCTTATCAAACCACCACCCAGCACTGGCCCCCACAACTTAGTACTGAC
CTCCCCCCTGGACCGGAAACAAAAACTTTTAGGGTTGGCCTGACCTGAAC
TTGGCCTGAACATGTGCAAGCCAAGTTTCGAAGGCAAAAAATCTAACTTT
GGTCTAACCGTGAGATCAGCTAACTTGAATCAATGGAGGTTTAACATGCA
TATCCCTCAAATAAATTATCCCTTAAATACAAAGTTACGCAAAGTCAATA
AATCAGAACAAACCTGATTAGGATTTGTGTATATATAGAACTGTTGCAAG
CACATCCTGTAGGTTTTCCCGAATCTGTAGTATGATTGACAGTGCTTCAA
TTTGGTTAAAACAGTTTGATTGTTGGTTGGTCTTGTTAGGTTAAGTGTGC
ATTGAAAGCCTTCTCTAGTCAGTTTTTACAGTGTGTATACAAGTGACCTT
GCAGAAGCAGTCGACGAGCCCATTTCCTCGAAATATCTGTTTCCCTTTTC
CAGGAGAGAGCGTTTTTTTGATAAATGGGGAAACAGATCCGATTTTCTAG
GAAAGACCTTTTCCAAAGCTATATGTTTCCCCGCTGATGACGTCATCAGA
GAGAAACAGATCAATATTTCTAGGATATGACATAATAAATTGGGAAACAG
ATATCTGTTTCCAAAAAAAGATGATATTGCATTGGAACAGATTGAACTTT
CTGGGGGAAAACAGATATCAATCACAAAAAGCAAGGGAAACAGATGAAAA
TTTCCAGGAGAGGGAAACAGATATCCTATTCCTTATAAGCTTGGGAGAAC
ATATCAGAATTTTAATTCTGAAAATTTTGAAATCAGATCAAATTTTCTAG
GGAAGATACTTTGAGATTAAAAATTTAGGTTTTGAAGAAAAACAGATCTT
CTTTGTGAAACTTTTGGCCAACAGATCAAATTTTCCAGGAAGGCTATGCC
TGGGAAACAGATGTTTAAAAAAAAAGGACCCTGCTGGATGCTTTCGACCT
TGACAACCTTTAACCTTCTAAAATCTTTTGAATGAACCCCCTAACCTTGA
AGACTGTGTTAAAAAATTATAAATTTTTATATACCATTTTGATGAATTTT
TACCAAATCTTGAAAATATTCACCCTGTTTTAGAAACCCTTGCCTTTCTT
ATTAAAACACTCTGTTAAACCCCTTAAGTTGGGAATAATGAAATGTGTAA
TGAATTAGCTCTGTGCATCGAAAGTACAACCTCAGTCATCTATACGCATC
GATTTCTCTTAATTGGATTGCAATTTTTTTCCGTAATAGGTCCTGAGCTG
TTCCTAGCAAACACTATTTATTTTCCTCTCTCTATTTGTATTTCTTTCTT
GTCTCAGAAAATACAAAATTAAAAGGGTTTTTTCATTTTTTCATAAACTG
TGCGAGATACTCTTCTCCAAAATAGCAAAATGGTTATAATGTTATTATTC
TATAAAATTTTCTTATTTTAGAAATCGAACCAAAACAAATTTTCTTCAAG
TGCAAGTAAGTGTTGTTTTTTTTTAGTTTATGTATTTCATAAAATTTTAT
AAGTTTGCTAAATCTGTCTGAGCTTTTAAAGATTAAAATTTCAACTTTCT
ATGGATAATATGTCATCTTTTGCAAAATGAAAGATATTTAAAGTGATGAA
AAACACTTCCTTTCTTCTATAGTTGGAAACCTAAAGAAAACAGCAAGATG
CTCAATGGTAACGAAGGCTTTAGGTGGACAGCAACAAAGTGCATTGTAAG
ACTTTCCGTTTTTTAACTGAAGGCTTTTTATTTTCATAGTGTCCTTCAGG
GTCTCTCCTTCATGCCTAGAATGAAAATCTTCCATTTCTTCCCCCCTCAT
TTTTGCCACCCTACAGCTCCAAAACTTTCTCTGACCCCCCCCCCCCCCCC
CCAAAAATTTTCCCCCCCCCCCCCCCCCCCCCCCCCCTCGAGCATAAAAA
GCTGTAATTTGAGGAATTTAAAACTTATTGTTTTCCCTAAGGTAGTTCTA
ATTCAAGAATAAATGGTAAGGCTGGTTGTTTTGAAACTGTAATATTGCTG
GTTGAAATAAATGAAGGAAAAACTAAGCATACACCCAAACGATGATAATA
AAAAATACCACTAAAATAATAACAAATCCTAAAGAGAATGAAAAAATACA
ACGTCCCCCCATGCCTACAATCAAAACATCCTATCCCCTCCCTCGTTTTT
CCCCACCCTGGCTTCAAAAAAAAGTCTCCCCCACCTCATACATCCTTTTG
GCCTCCAAACCCATTTCCCCTGAATCCAGGGGGGCATATGATTTTTGGAC
CTACCCCGGTGTTAGTCCGTCCGTCCGTCCGTTCGTCTGTTACCAACTTT
TCTGAGGATTGAATTATAGGAATCTTTTGATTTTTGGTACAAAGGTGCAA
AATGGTAGTGGCCAAAATGTGATGGAGCCCGATTTTCGAAAGAAAATGCT
TTTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAAACGGGTTTTTTGGAC
TTTGTGAAAAATTGGAACATTAATTTTTTCAGATTTTTTGCATGAAAATA
GGTAAAAGATGGCTCAAGCAGATTTTTGCAAAAAGATTTTGTTGGCTCAA
AAAACGCATGTTTATCTATAAGAATCACTATTAATAAGCATACATCAATG
TTCTTAGTCAAAATACTCAATTCTTTGATGAGATAGACGTTTTTTTGCTC
ACGAAGTCTAAAATATGAAAGAATATTTCACGATCATGAAGTTTTGGTTT
CTAAACGTTTTTTTTATAAGAAACAAACGACTAATTTTAATAGATCGTCA
CTATTTGTGTTCTGAATGATTTTTTGACGGTCATGCTTATGTATATATCA
ATTATATGTGTTAAATTCATAACCAGGTAGGTCCATAAAAGTATCACTTG
TTCAAATTGATATTGTCATGAGGAATTGTTGTTTTCATACTTAATAGTGT
TGTAAATCAGAAGGTTGAATACCACAAATCTTCAGTTAGTTTGATAATTC
TTTTTTGCTTTTTTTATCCTCAGGATGAATGCAGCAAGTAAAATGGAAAT
GCGACAATTACAAAAGTCGGTGGCCGTCATGAGTAAGTTTTTGCATTCGT
ATTTAAGTTGATAATGAATATTTTCACAAGTACCTTATCTATATCATCAA
GGGAACTTATTTTGGCGGGAACTAATTTTGGCGAATTTGGCGAATTTAGA
CGAAATTCGCTAAATTTAGTTCCCACCAAAATTAATATTTTGCTCACTCG
CCAAAATAAGTTCCCGCCAAAATTAAATGTTTTATTTCCTTGTCTAAATA
ACCCCTAAAATTCATAAAAATTGCTCAAAATAAGGCAAAATAGAACAGAT
TTACACTGTCATTCGCCAAAATTAGTTCCCGCCAAAATTAAAATGTTTTA
AGATTTTCGCTGCTCGCCAAAATTAGTTCCCGCCAAAATAAGTTCCCCTA
AGGTAACTATAAGCCTGCTCTTATTTATTTCTGTGGTAATATCGAGGCTG
GTGTTAATAAAGAAGGTCGACGTAAAATAATATTTTGAATATTTGACCTA
AAAGTTGCGTTAATTTGACTTTTTACTGAATTTGAAAGAGTTCAATTGTT
ACCAAAAGAAGAAATTTATCAAATTTAATTCCTAAATTTCTGTATTCTCC
CCTTTGAAGACCGTGTAAATTAACCCGATCTACTTTTTCAATCATATTTA
GGCCTGTCATCAAAGGTGTCAGCATGCATGGATATTTGTGTCCCAGCTGA
TAGTGATGTCAGTGAAAGCTCCGAAGATGCGGAAGATGTTTGCTCTCAAC
CAGGTCATAAACACAAACGCATATGATGATGACAACAATGGTTTTGTGTA
GTGAATAAGCTCTACTGTAACTTGGTCTAATGTCGACATCCCTCCTCTAA
TTCCGACACCCTCTTTATCAGCTGAAATTGATAGAAAAGGTTAAAACTAT
TTTCTTTGCTCAGTGGTCGAGATGTCCTGGAGTTTTTATAAGATACTTCA
CTAATTGGTCATTTAAAGTAATAGAGATGACGCGTTCTTTAGAAAAAGTA
AAAAAATTGTTTTGTTACAGGCTAACGACCGACCAAATCAAGAAAGAGCT
TTTAACAACTCCAGCTTGTCCCCAGTGGTCAGAGAGGAATAATCCTTTTT
CAATCAGCGATTCAAGCTTTCATATTATTCCTGTCTCTAAAGAAGGGTGT
CGGAATTAGACGAGGGATGTCGATATTAGACCAGCTTACGGTAGTTTAGA
CGGCTCACCTTTCGCCCTGCGTATTCTAATTGTAAGAGTAGGCACAAAGT
GAGCAGTTAATTTCTTTGCTTCAAAAAGTTTGAAAGAGGACAGTGCATTG
ACATCAAAAGAGGCCAATGCATTGACTTTAGACAGCCCACTTTATGCTTG
CCTTTATTCACAATTAGAATAGGCAGGGCGAAAAGTGGGACGTCTAAACT
AGAGCTAAGATTTCAAATCTACAATTAATAACAAGTACATTTGCATAATC
TACTGTATGCCCATACATATAATGTATTTAGAAATACCAGACTGCAAATA
TGATTGGATAGTAAATTTCTATTCACAAAGAACTACAAGAGTGGAATTGG
ACTGCTTTGTTTGGTGTGACGAAAATGTTATATGGCGATTAAAAATATGA
GAGTCAACTCTGGAACTTTTTGTTCAAATAATATTTTTTATAACTAGAAA
TAAGGATGGACTTTGGATGAAACTTAATTTGTAAAAAATTATTTTGGGAC
ATTTTCGCAGCTGTTAAATTGTACTCTCAAAACTAGGCTTCTTACACTTT
CAAACCAATTGGGCAACTAAAATATTTTTTTATGCATACTCTATTCTAAA
ATTGTTTCAAATGTGAAAGCTATAATACTGTCTCAGCATAGTCATCGGCC
TGCTATAAGCACCCTTCACACTTCAGATTGCGTAGTTTTTATATTTTAAT
GATTTTGGATTATATTATTGTATAAAAACAAAGCTTAGTACAGTTAGTAG
GATATATTTTAATTTTCAAAGGTAAAACTTATTTTTATTAATGATAGTAA
AAGAGCTTTAAACAAAAAGCATTCTTGTTCCAAATCCCAAAATCAATC

Coding sequence (CDS) from alignment at sc0000447:231846..243243-

>TCONS_00023242 ID=TCONS_00023242|Name=TCONS_00023242|organism=Clytia hemisphaerica|type=CDS|length=1785bp|location=Sequence derived from alignment at sc0000447:231846..243243- (Clytia hemisphaerica)
GCCTGTCATCAAAGGTGTCAGCATGCATGGATATTTGTGTCCCAGCTGAT
AGTGATGTCAGTGAAAGCTCCGAAGATGCGGAAGATGTTTGCTCTCAACC
AGGTCATAAACACAAACGCATATGAGATGAATGCAGCAAGTAAAATGGAA
ATGCGACAATTACAAAAGTCGGTGGCCGTCATGATTGGAAACCTAAAGAA
AACAGCAAGATGCTCAATGGTAACGAAGGCTTTAGGTGGACAGCAACAAA
GTGCATTAAATCGAACCAAAACAAATTTTCTTCAAGTGCAAATGGCTTCA
GCTGGAAGGTTTATGCGACAGTCCCAAAATTTTGCAAGGCATGTTGGAAA
TTCATTGGCCTGTCATCAAAGGTGTCAGCATGCATGGATATTTGTGTCCC
AGCTGATAGTGATGTCAGTGAAAGCTCCGAAGATGCGGAAGATGTTTGCT
CTCAACCAGGTCATAAACACAAACGCATATGAGATGAATGCAGCAAGTAA
AATGGAAATGCGACAATTACAAAAGTCGGTGGCCGTCATGATTGGAAACC
TAAAGAAAACAGCAAGATGCTCAATGGTAACGAAGGCTTTAGGTGGACAG
CAACAAAGTGCATTAAATCGAACCAAAACAAATTTTCTTCAAGTGCAAAT
GGCTTCAGCTGGAAGGTTTATGCGACAGTCCCAAAATTTTGCAAGGCATG
TTGGAAATTCATTGGCCTGTCATCAAAGGTGTCAGCATGCATGGATATTT
GTGTCCCAGCTGATAGTGATGTCAGTGAAAGCTCCGAAGATGCGGAAGAT
GTTTGCTCTCAACCAGGTCATAAACACAAACGCATATGAGATGAATGCAG
CAAGTAAAATGGAAATGCGACAATTACAAAAGTCGGTGGCCGTCATGATT
GGAAACCTAAAGAAAACAGCAAGATGCTCAATGGTAACGAAGGCTTTAGG
TGGACAGCAACAAAGTGCATTAAATCGAACCAAAACAAATTTTCTTCAAG
TGCAAATGGCTTCAGCTGGAAGGTTTATGCGACAGTCCCAAAATTTTGCA
AGGCATGTTGGAAATTCATTGGCCTGTCATCAAAGGTGTCAGCATGCATG
GATATTTGTGTCCCAGCTGATAGTGATGTCAGTGAAAGCTCCGAAGATGC
GGAAGATGTTTGCTCTCAACCAGGTCATAAACACAAACGCATATGAGATG
AATGCAGCAAGTAAAATGGAAATGCGACAATTACAAAAGTCGGTGGCCGT
CATGATTGGAAACCTAAAGAAAACAGCAAGATGCTCAATGGTAACGAAGG
CTTTAGGTGGACAGCAACAAAGTGCATTAAATCGAACCAAAACAAATTTT
CTTCAAGTGCAAATGGCTTCAGCTGGAAGGTTTATGCGACAGTCCCAAAA
TTTTGCAAGGCATGTTGGAAATTCATTGGCCTGTCATCAAAGGTGTCAGC
ATGCATGGATATTTGTGTCCCAGCTGATAGTGATGTCAGTGAAAGCTCCG
AAGATGCGGAAGATGTTTGCTCTCAACCAGGTCATAAACACAAACGCATA
TGAGATGAATGCAGCAAGTAAAATGGAAATGCGACAATTACAAAAGTCGG
TGGCCGTCATGATTGGAAACCTAAAGAAAACAGCAAGATGCTCAATGGTA
ACGAAGGCTTTAGGTGGACAGCAACAAAGTGCATTAAATCGAACCAAAAC
AAATTTTCTTCAAGTGCAAATGGCTTCAGCTGGAAGGTTTATGCGACAGT
CCCAAAATTTTGCAAGGCATGTTGGAAATTCATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013069XLOC_013069Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023242-exon-sc0000447-1575043694:242573..243243TCONS_00023242-exon-sc0000447-1575043694:242573..243243Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1575043694:235439..235472TCONS_00023242-exon-sc0000447-1575043694:235439..235472Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1575043694:235199..235271TCONS_00023242-exon-sc0000447-1575043694:235199..235271Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1575043694:233862..233920TCONS_00023242-exon-sc0000447-1575043694:233862..233920Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1575043694:231846..233242TCONS_00023242-exon-sc0000447-1575043694:231846..233242Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1510915933:242573..243243TCONS_00023242-exon-sc0000447-1510915933:242573..243243Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1510915933:235439..235472TCONS_00023242-exon-sc0000447-1510915933:235439..235472Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1510915933:235199..235271TCONS_00023242-exon-sc0000447-1510915933:235199..235271Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1510915933:233862..233920TCONS_00023242-exon-sc0000447-1510915933:233862..233920Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1510915933:231846..233242TCONS_00023242-exon-sc0000447-1510915933:231846..233242Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1491911889:242573..243243TCONS_00023242-exon-sc0000447-1491911889:242573..243243Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1491911889:235439..235472TCONS_00023242-exon-sc0000447-1491911889:235439..235472Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1491911889:235199..235271TCONS_00023242-exon-sc0000447-1491911889:235199..235271Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1491911889:233862..233920TCONS_00023242-exon-sc0000447-1491911889:233862..233920Clytia hemisphaericaexon
TCONS_00023242-exon-sc0000447-1491911889:231846..233242TCONS_00023242-exon-sc0000447-1491911889:231846..233242Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023242-proteinTCONS_00023242-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000447supercontigsc0000447:231846..243243 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.7243	22.1142	16.9222	17.1069	63.579	48.8052	37.5138	40.3943	32.6686	32.251	24.1387	21.8611	17.6453	17.5726	24.2128	32.5076	54.9181	53.8212	6.08299	8.81022	33.0612	32.4373	30.2948	30.2236	23.7694	27.9638	31.8314	20.8135	35.1117	29.7807
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023242 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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