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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023238 ID=TCONS_00023238|Name=TCONS_00023238|organism=Clytia hemisphaerica|type=transcript|length=576bp
ctttcgctaaggcgaaattaatGATGGCTTACATTATGAGATATTTCTTG
TTAATGCTTATTTAATTGAGTTTTCTTGGAAAGTCGAAACGTCGCATAAA
CAAGTATCAACAGGAAGTATACTTGTAATACTAGAATTTGATCAAAATAA
ATTCTCCTAACTATTCACAAAAGACAAGTAAAACTGGAGTTATTACTTTT
ACCAAACATGGAAATGTCATTGTTGTAATCTGCTTTTGTTCTGAACCTTA
TAAATGTGTATTTCAATATCCACCTCCCTTTTTCATCGCGAGTTGAACAT
CATAGAGTGTCAGCTATCTTCGAAAGAAAAGTGAAAGTaccttttataat
tttttgtcaatttaatCGTGAAATTCGCTCAAAAAAGCAACGAGTGAATC
GGAATTATCATCAAATTGaacattgttttgaaaaaagcaaaaatacCTGA
AAAGAAACACACGTCAAAATTAGCAAGATGGTGAAGGGACACAATATCAA
GTTGAAGATCACTAACAATACAGGAAGCATTTTGAGATACCACGGCGAAT
GGTTTGATTCAGGACGCGTGGCTGAT Run BLAST on NCBI transcript from alignment at sc0000447:206527..207458- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023238 ID=TCONS_00023238|Name=TCONS_00023238|organism=Clytia hemisphaerica|type=transcript|length=932bp|location=Sequence derived from alignment at sc0000447:206527..207458- (Clytia hemisphaerica)
CTTTCGCTAAGGCGAAATTAATGATGGCTTACATTATGAGATATTTCTTG
TTAATGCTTATTTAATTGAGTTTTCTTGGAAAGTCGAAACGTCGCATAAA
CAAGTATCAACAGGAAGTATACTTGTAATACTAGAATTTGATCAAAATAA
ATTCTCCTAACTATTCACAAAAGACAAGTAAAACTGGAGTTATTACTTTT
ACCAAACATGGAAATGTCATTGTTGTAATCTGCTTTTGTTCTGAACCTTA
TAAATGTGTATTTCAATATCCACCTCCCTTTTTCATCGCGAGTTGAACAT
CATAGAGTGTCAGCTATCTTCGAAAGAAAAGTGAAAGTACCTTTTATAAT
TTTTTGTCAATTTAATCGTGAAATTCGCTCAAAAAAGCAACGAGTGAATC
GGAATTATCATCAAATTGAACATTGTTTTGAAAAAAGGTATGTAATCGTT
AAATCGTTTTATTTCTAAAATCTCAAAAAAATTGCTTCAGCAATAAGAGT
TGCATCCGTCGATACTCTGAGGTCCCGAAAAAACGTCTCCCCACGGTTAT
TATTTTTCGAAAAATTCTCAGACCCTACCCTACTTATTTGGACCTATTTT
CAGCTTTCAAAAGCTGAATTGATCTGAACCTGATCTTGAATCTGAATCCT
CCGGATTTTAAAGAGCAATGTATAAAATCACTACTTCCTACCGTTGAAGG
GAAAATAGCTGATAAACGGAAAAACTATCGGCTCGATTTCGAAAATTTAT
GCCCTGTATACCTTTGTTGAAATAAGCTTTGTTGGAATTTCAGCAAAAAT
ACCTGAAAAGAAACACACGTCAAAATTAGCAAGATGGTGAAGGGACACAA
TATCAAGTTGAAGATCACTAACAATACAGGAAGCATTTTGAGATACCACG
GCGAATGGTTTGATTCAGGACGCGTGGCTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023238-exon-sc0000447-1575043694:207022..207458 | TCONS_00023238-exon-sc0000447-1575043694:207022..207458 | Clytia hemisphaerica | exon |
| TCONS_00023238-exon-sc0000447-1575043694:206527..206665 | TCONS_00023238-exon-sc0000447-1575043694:206527..206665 | Clytia hemisphaerica | exon |
| TCONS_00023238-exon-sc0000447-1510915933:207022..207458 | TCONS_00023238-exon-sc0000447-1510915933:207022..207458 | Clytia hemisphaerica | exon |
| TCONS_00023238-exon-sc0000447-1510915933:206527..206665 | TCONS_00023238-exon-sc0000447-1510915933:206527..206665 | Clytia hemisphaerica | exon |
| TCONS_00023238-exon-sc0000447-1491911889:207022..207458 | TCONS_00023238-exon-sc0000447-1491911889:207022..207458 | Clytia hemisphaerica | exon |
| TCONS_00023238-exon-sc0000447-1491911889:206527..206665 | TCONS_00023238-exon-sc0000447-1491911889:206527..206665 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000447 | supercontig | sc0000447:206527..207458 - |
Blast
The following BLAST results are available for this feature:
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