|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023180 ID=TCONS_00023180|Name=TCONS_00023180|organism=Clytia hemisphaerica|type=transcript|length=857bp
ATCATATATAGAAATTACAAAATAATAGGTTTTTAGGTCAAAATTGACCG
AAAAAGGCGAAAATTACTCAAAATCAAGATTTTCAGTGTTTAAAGCATAT
TGAATCAATTTTTGACACtcttaagtgctttaaagtgaTAAAATAGATGT
TTCATTATATATAATCTAGTGCAATAAGCTATCCTAATGgcaaaattgag
caaaaatttgggtttttaagggattttttatcaaaaatacccCCGAAATA
GCGGAAAATAGCGatttttgagctttcataactTTTAAAGGCCAATTCaa
gactgaaatttggcaaaattaaaAACGAACAGAAAGATAGCCTGTACATT
GGAAATTAAACAACAACGATttgtacaaaaacaaaaagaagtgATAGCCA
GCAATGTTGATGAAGAAGATGCAGCCAAGCTAGCAACCAGCAACAAAGTT
ATCAGGTGTGTATCTGCTTGCAAAAGATCCCACCAAGGGCCAATCACTAC
AATTGAAGAGCTTGACACCCTGGTTCAAGACTGGAATGGTACAGAAAAAG
GGCTTCAAATAGCATTGCATTTGGAGATCAGGTTCAGAAAGTTCACCTTT
TATAAAGTGAAGACAACGTGTCCCTTTTGTTTAAACAACGTGACTTAACA
GTTGAGCAGAAGGTGAAGAATTTGACGACTCGAATCACATCTCAACTGGA
ATTTAGAGTTCTAGCTGACATGATGGATCTTGAGAATGCAATCAATAATA
ATGCAAGCACAACTGACAATGAAGCAGAGGTGGAAGGAGAGCAAGATGAA
TTGATGGATGGTATTACTCAACACGATGAACAAGAAAATTTTAGAGGAAA
AGAGGTG Run BLAST on NCBI transcript from alignment at sc0000446:12277..13474+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023180 ID=TCONS_00023180|Name=TCONS_00023180|organism=Clytia hemisphaerica|type=transcript|length=1198bp|location=Sequence derived from alignment at sc0000446:12277..13474+ (Clytia hemisphaerica)
ATCATATATAGAAATTACAAAATAATAGGTTTTTAGGTCAAAATTGACCG
AAAAAGGCGAAAATTACTCAAAATCAAGATTTTCAGTGTTTAAAGCATAT
TGAATCAATTTTTGACACtcttaagtgctttaaagtgaTAAAATAGATGT
TTCATTATATATAATCTAGTGCAATAAGCTATCCTAATGgcaaaattgag
caaaaatttgggtttttaagggattttttatcaaaaatacccCCGAAATA
GCGGAAAATAGCGatttttgagctttcataactTTTAAAGGCCAATTCaa
gactgaaatttggcaaaattaaaAACGAACAGAAAGATAGCCTGTACATT
GGAAATTAAACAACAACGATttgtacaaaaacaaaaagaagtgATAGCCA
GCAATGTTGATGAAGAAGATGCAGCCAAGCTAGCAACCAGCAACAAAGTT
ATCAGGTGTGTATCTGCTTGCAAAAGATCCCACCAAGGGCCAATCACTAC
AATTGAAGAGCTTGACACCCTGGTTCAAGACTGGAATGGTACAGAAAAAG
GGCTTCAAATAGCATTGCATTTGGAGATCAGGTTCAGAAAGTTCACCTTT
TATAAAGTGAAGACAACGTGTCCCTTTTGTTTAAACAACGTGACTTAACA
GTTGAGCAGAAGGTGAAGAATTTGACGACTCGAATCACATCTCAACTGGA
ATTTAGAGTTCTAGCTGACATGATGGATCTTGAGAATGCAATCAATAATA
ATGCAAGCACAACTGACAATGAAGCAGAGGTGGAAGGAGAGCAAGATGAA
TTGATGGATGGTATTACTCAACACGATGAACAAGAAAATTTTAGAGGAAA
AGAGGtaaactttaaatcttaaacccACCTATTCCATGAACCTTTGTGTT
TTTCAGGATAAGTGAATTGATTTACCAATCAGAGGAAAAACAAGCACTTA
AGTTATCATTTCAATATGCTCTAGATTTCAAAGTTTATGTATCATTTTCT
TCAATATATACGTTTGGAAAGGCAAGAGATTCAAGATTGGCCACCCAttg
ttggagattttcttattgGAGCATTTGAGGATGGTTTTTACCCAGGTTAG
ATTTTATTTCATCTTTAAGTATGTATAATAATGTGTTAAATAATGAAAGA
AACACCTGATCTTTTACTTAGTAATGACATTCTTTTTACTTTTAGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023180-exon-sc0000446-1491911889:12277..13130 | TCONS_00023180-exon-sc0000446-1491911889:12277..13130 | Clytia hemisphaerica | exon |
| TCONS_00023180-exon-sc0000446-1510915933:12277..13130 | TCONS_00023180-exon-sc0000446-1510915933:12277..13130 | Clytia hemisphaerica | exon |
| TCONS_00023180-exon-sc0000446-1575043694:12277..13130 | TCONS_00023180-exon-sc0000446-1575043694:12277..13130 | Clytia hemisphaerica | exon |
| TCONS_00023180-exon-sc0000446-1491911889:13472..13474 | TCONS_00023180-exon-sc0000446-1491911889:13472..13474 | Clytia hemisphaerica | exon |
| TCONS_00023180-exon-sc0000446-1510915933:13472..13474 | TCONS_00023180-exon-sc0000446-1510915933:13472..13474 | Clytia hemisphaerica | exon |
| TCONS_00023180-exon-sc0000446-1575043694:13472..13474 | TCONS_00023180-exon-sc0000446-1575043694:13472..13474 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000446 | supercontig | sc0000446:12277..13474 + |
Blast
The following BLAST results are available for this feature:
|
