TCONS_00023121 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023121
Unique NameTCONS_00023121
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023121 ID=TCONS_00023121|Name=TCONS_00023121|organism=Clytia hemisphaerica|type=transcript|length=1120bp
GTTGTTTCCAAATCGGTCCGCATCATTCAACGATGAAGAGTCGAACCACA
AGAAAGAATATGCTTTGCAGTTGGATTGGGTATATGGTTTTGACAGTCTT
GTTGGTATTGAAGCTTCCTCAACCAATCAAATCCTTTTCACCTGTGGCCG
AGTGGCTGTTACCATGGATACAAAGCAacacaaacaaagattttttcgaa
aacatTCTCAAGATATCACTTGTTTCGCTTTACAAGACGATACAGCAGCA
ACAGTACAATGTTGGGATGGTAAAAAGTGTATGGTTTATGTATGGAGCAC
TGTTGATATGGCAACCATCTCCACTTTGTATGTTGACCAATACGAGGCTg
ccattttcaaaaagattgcTTTTCTATCTGAGACGTTGCTGGTAGCCATC
ATAGAAAGTGGAGGGGTCAACCTTGGATGTATTTTCAACGTCAAAGACAG
CGATCCTGTTTCAACAACGAAGATACCTGATGCATTTAATGGAATAACAA
CTTACTATCAACCAACAGCCACCAATCTCCACTTTGCTATCTTTGGAAAG
GATGAATGTCGACTTTGCTTTTACGAATACAACAACAATCACATTATATC
AAATAAGGCAGCGAACTTTGGGACCTTACCTAAACCCAAATCTATCACCT
TCGCATTATTCAGTGGAAAAGAGGATCTGCTCACAGGTGACAGCAATGGA
ACTATATTGCTATGGAAACGAACAACATTAAAAATTGAACGTGTTGTCAA
CAATGCGCATGCGTCTTGGATATCTTCCATGTGTATTTCACAGACCGGAA
TTTTATTCAGTTCCGGCAACCGGGATGGTCTTGTGAAAGCGTGGAGTAGA
GACTTGAAACTGGCTGTATCAATAGTTTCGATATCGAACTACAGtgaaaa
cataagaaatatgaCCATTTTTAACGAGACGATATTTTTGGGAACTGGGG
ACAATAACATACTGAGGATGAGCATCGAGTTGGGTTGCAATGATCCTTTG
CGCGAGGTGAAAGATTCGCTGTGCATTGTTAATGAGggtcaagatgacgt
catcagtggTCTGGCAACAGATCCAATTTACAAAGAAAGCATGTGTAGTC
TTTCGGCTGACGGCACTTTN
Run BLAST on NCBI

transcript from alignment at sc0000443:66072..75757-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023121 ID=TCONS_00023121|Name=TCONS_00023121|organism=Clytia hemisphaerica|type=transcript|length=9686bp|location=Sequence derived from alignment at sc0000443:66072..75757- (Clytia hemisphaerica)
GTTGTTTCCAAATCGGTCCGCATCATTCAACGATGAAGAGTCGAACCACA
AGAAAGAATATGCTTTGCAGTTGGATTGGGTGTAAGATTTAAGAAAATCA
TTAAATTGGCAGGATAAGCTAGTTTTTTCTGAATAAAATTCGCAGTAAAA
ACTAGTCTCTAGCAGCTTCGGTCACTATTTTTATCTCATTGCTGACTAAT
AGCTACTCAGATGTTTCTCTTTCTATGGGTATGTACCACTGACCTTTATA
TATCCCTGGACCAAGTTACCCAATGCCGGCCAAGCAAAATATTATGATCG
GATTTTTTTTGAAATTGGTACCCGCTAAGAGAGCGCACGTTCTTATTTCG
CTTGTGCACTAGTGATGTAGCGCCGTTTGTCGGTAGGCAAAGTGTCAAAC
ACTACAATGGCTTCTTTGCGGGTACCAACTTTCAAAAAACTTCGATCAAA
GATGGCGGATATAGCTTGGTCCAGGGATATATAAAAGTCAGTGGTATGTA
CTAATAAGATGTAGGAGGATGTCACTATTTCATATTTTTCAAGAAATGTT
GCGTCTAAGCCATGTTTAACATTGAGTTTACCAGTGACAGTTTACCAAAA
CTTCAATTCATTTAATTCAACTTTGTTCTGTTCATAGATATGGTTTTGAC
AGTCTTGTTGGTATTGAAGCTTCCTCAACCAATCAAATCCTTTTCACCTG
TGGCCGAGTGGCTGTTACCATGGATACAAAGCAACACAAACAAAGATTTT
TTCGAAAACATTCTCAAGATATCACTTGGTATAAGAAGAAATTCATTTTC
ATTCTTCCTTTCGTAACGCGGTTGTATTTATTGTCCAAACCATAAAATCT
CGTTACATAGTTTTACGAATGGGAATGCCAACAAAGAAAGTAGGGGGGAC
GGGTGGGATATTAACGCGGTTGTATTTATTGTCCAAACCATAAAATCTCG
TTACATAGTTTTACGAATGGGGATGCCAACAAAGAAAGTAGGGGGGAGAC
GGGTGGGATATTAACGCGGTTGTATTTATTGTCCAAACCATAAAATCTCG
TTACATAGTTTTACGAATGGGGATGCCAACAAAGAAAGTAGGGGGGAGAC
GGGTGGGATATTAACGCGGTTGTATTTATTGTCCAAACCATAAAATCTCG
TTACATAGTTTTACGAATGGGGATGCCAACAAAGAAAGTAGGGGGGAGAC
GGGTGGGATATTAACGCGGTTGTATTTATTGTCCAAACCATAAAATCTCG
TTACATAGTTTTACGAATGGGGATGCCAACAAAGAAAGTAGGGGGGAGAC
GGGTGGGATATTAACGCGGTTGTATTTATTGTCCAAACCATAAAATCTCG
TTACATAGTTTTACGAATGGGGATGCCAACAAAGAAAGTAGGGGGGAGAC
GGGTGGGATATTAACGCGGTTGTATTTATTGTCCAAACCATAAAATCTCG
TTACATAGTTTTACGAATGGGGATGCCAACAAAGAAAGTAGGGGGGAGAC
GGGTGGGATATTAACGCGGTTGTATTTATTGTCCAAACCATAAAATCTCG
TTACATAGTTTTACGAATGGGGATGCCAACAAAGAAAGTAGGGGGGACGG
GTGGGATATTAACGCGGTTGTATTTATTGTCCAAACCATAAAATCTCGTT
ACATAGTTTTACGAATGGGGATGCCAACAAAGAAATTAGGGGGGACTGAT
GGGATATTTTCATAGATTTATAAAGCCCGAAGGGCTAGATGGCATGCTTT
AAGCTCTTCCAAGCAAAAAAAAGTGAATATCGCAAAAGATATTGCTGCTA
TTGTTTTCGAAAACCCGTGAAGCTTCTGATTGGTCAAGCGCTGAAATTAT
ATTGTAATGTCACGTGACAGTTTGACCTCGGCACACTTTTCAGCAAAAGC
ACTCTATCTAGCCCTTGGGCTTTTTTAAATCTATGGATATTTTCCCCGTG
CTATTGAACTTTAAAAGGGAAAATTTGCTCAATTTAGCATTGTTGAAATT
AGTTCTTTTCAAAATGTGGTAGACAATCAGATCTCTCAATTTTGTTCGCA
GACCTGACGGTAAAACAAGAGGGGAAGGGATTTTTGCGAGTAAACAAATA
AGAATCAAACTTCCTTCCTCACTGTATGTTGTTTGTTGTTATCAACGGTG
AATTGTTTTGAAGGGTTTTGAATTACAATAAATCTTTTTTTTGATCTTTC
GTTTTCAGTTTCGCTTTACAAGACGATACAGCAGCAACAGTACAATGTTG
GGATGGTAAAAAGGTAGATATTTTATTGTTTGCACGGGATTCACGACTGG
GCTATTTCTGGATTGGACGAAAGACAAAAAGGGTTTGTGGTTTGTGAATC
GGTAAGAATTGACAATGCTTTTTTTTTGTGGGATGGTAAAAAAGGCAGAT
ATAGTCGATGTTTCATTCTTTTCATCTGGAACACAACTGGAACACAATGT
TGTGGTTTTGGCGAAAGTGCCTTGTTTGTCGCTCCATTAACGAATTGACA
AATCCCAACAAATTTGCTTTGAATGACATCTCGTTTTATTTTTGAATGCT
GACGTGATGACGGATTGAATTTATAAAAAAAAGAAAAGAAAAGCCTCTGC
TGTTGGTGCAATACCTGAAAATGATCAGAACCCCATTTTCTCTACCTGTG
CCCGACTAAAAAGAAGTAATGAAAAAATCAAAGCAAATGGTTTGGAAACA
ACTTTGGTAGTACCTATTTCACACTGGCAGTCAGATTAAGAGTTGAATCT
AGTAGCTAATTTGAACTGGCGCGGGAAATCTTGCACTGATCTAAATTTTA
CGGATACAGTATTACTTCGAATAAACATTCCGGGCGTTTATCAAATTTTC
GAGGTTTTAGGAGGGCCATTTATCCGCTCGATTCATGGGGCTGCACTGTG
AAGGATTCGTAATTATTATTAAAGAGAGTCCTCCTCCTCTTAACTAAAAA
ATCATTTAGAAATAAATGAAATCTTGTCGTTTACTTTCTTTTTCCGTTTA
GTGTATGGTTTATGTATGGAGCACTGTTGATATGGCAACCATCTCCACTT
TGTATGTTGACCAATACGAGGCTGCCATTTTCAAAAAGATTGCTTTTCTA
TCTGAGGTCAGTATCGTTTCATTAAAGCTTGATTTAGATTCCAGCAAGTG
AACGTCCCAATATCAGGACTTTTGTAGATTCTAGCAAGTGAACGTCCCAA
TATCAGGACTTTTGTAGATTCTAGCAAGCGAACATCCCAATATCAGGACT
TGAAACCTGATTTTTCTTCTCTTTATCAATCAGACGTTGCTGGTAGCCAT
CATAGAAAGTGGAGGGGTCAACCTTGGATGTATTTTCAACGTCAAAGACA
GCGATCCTGTTTCAACAACGAAGGTATGGTCCTTGAATTGCTTCCTCTTA
GTTTTTTGAACAAAAATACAAAAAAAAAACCTTTCAAGAATGCCCGATGT
CTGGTTGTACTTCACTGGTTATTATATAAGAGTAATTCCCTTGAGTGGTT
TCCATATGGTAGCGAGTGGATACCTTTAAAGCGGTTGGATTCGAGTTTTC
CTTGTGATTTTTGTTCTGCATATGGAAACCATGTCATCGTATTTAAGACT
AATTCCCTTGAACGTGGTTTCTACATGGTAGCAAAGAAAGAGTGCACACT
TTTAAAGTGAATGGATTTTAAGTGTCAAACCTTTATCACACAGTTGTCCG
CTCAAACCCAATGGACATTGACAAGCAGACAGTTGACCCCTTGAATTTTA
TGAATGGGTTTCGAGACTGAATATCATTAGCATTCATGTATTTACCCCTT
CGGGGACGGTGGAGTAACTGAAACGATTTTTAAACAATCCTTATTTTATA
ACCAGCAGAAATCGAGGAGGCTGAAAGTGCATACTCTGAAAAACTAGCTG
TCAAAGTTGAAAAAGGGCGTTTCGAAATAAGAATCACTGCGTGAAACTGA
TTATCAACATTACTGTGGTGGAAAGGGAGCCTTGTCCGGAGCCATATCAC
CTAATCCTTTAAAGGTTTTCTACGGGAATAAAAGGAGCTTATTTTAGGCA
GGGTCTTCATGCTGGAGTCAGATAAATTAAAGCTACTTTTTTACGCAACG
ATATCCTGCAAACAATTGAAAGATCGAAAGTTGTTTCACATTCTATTGCT
TTTGTAAACAAAATAGCAAAGTTGATTTCGAGCTAATTTACAATCGAATG
TTTTGATTATAAGATAGAAAACTTTCTATTTATTATAAACACAAAAACAT
TCGAAAGAGTATCGGTAAAAGTCCCTTTGTTGAATGAGGAATGTTTTTTT
ATTCAATGTATTTTCATTTTTTCAAAACCTTTTTCTAATCTTGTCGCACT
TGTTTTTACTACATCAGCATCATCAGACCTTTCAATCAAAAAAAATTCTT
TAAGCCCAACTTTCCATGGTTCTCAACCAATTAAATCTCCGACAAATTAT
CGCCGAAGACGGATAAATTATTTTAGCAGTCCTCTATTTTTTCAAACCTT
TTATTCAGATACCTGATGCATTTAATGGAATAACAACTTACTATCAACCA
ACAGCCACCAATCTCCACTTTGCTATCTTTGGAAAGGATGAATGTCGACT
TTGCTTTTACGAATACAACAACAATCACATTATATCAAATAAGGCAGCGA
ACTTTGGGGTGAGAAGAATTGTTCACTTTTAGTTTTTTCTTTACTGTTGA
TTTGAGCTCTTCCAGAGGCCCTTTTTTTATAATAACCATTAAATTCGATG
GGGAGACTAAGTTGTTCTTATTTTTTTTTCAAACTCTTTTCAGGCTTTTA
AGTTTTTTAGATTATTCCCTTCATTCACTTTACGTCAGTCAATCTCTGAA
ATCTGAGCCTGGGTTTGTTCTTTCGGTTTGTTCTTTCGGTTTGTTCTTTT
TTTTTATTTTGTTCTTAATCGAGCCATGTGTTCTTATAGAACTGTTCAGA
AAATGTTCTTTTTGTTTCCAAACATGTTGTGATATGAATCATTAACTCTC
ATTGAACAATAGCAATATTTTTTTACAAACTGAACTATGAGGTTTGGTGA
GCCGACAGCCTTAAATTTTATAACTATCTGCTCTTCTTAAACCATGTTGG
AATTCCTATAAAATGTCTTACTCTTTTTTTTACCTTAGACCTTACCTAAA
CCCAAATCTATCACCTTCGCATTATTCAGTGGAAAAGAGGATCTGCTCAC
AGGTGACAGCAATGGAACTATATTGCTATGGAAACGAACAACATTAAAAA
TTGAACGTGTTGTCAACAATGCGCATGCGTCTTGGATATCTTCCATGTGT
ATTTCACAGACCGGAATTTTATTCAGTTCCGGCAACCGGGATGGTCTTGT
GAAAGCGTGGAGTAGAGACTTGAAACTGGCTGTATCAATAGTTTCGGTAA
GTATAAATGTTTTTTTACCTTTATTTAGATAAGCTTTTTTTCACATGCAC
GTAAAGTTTTACTTAAGACCTTACGGAAAATCGTTTGTAAGGCTGTCTTT
TGGGAATTTCCCCGACATCATGTAGAGTTTTGGTTGATTAAGAGGGTCTT
AAGTGACTTTTTCTTCCGTTCAAAAATTTTTGAACGCAAGCGAACTCTAA
GGCCTTAAAACACTACGTAAACTTAGGGAAAGTCCCATCCTTCAAGGTCT
TAAGTAAAATTTTACGTACATGTTAAAAAAGCTATAGAATACGCAGGCTG
TGTGCATCCCCGGAATCGATTTTGGTATAAAGGATACGTATCATGTAAAA
AATTCTCGTCCAAGAGGTACCGTTTTCAATCAATTTTCTTGAAAAGGTTC
AGAAATCAATAATTGTATTAAAACCTCTAGCCGTTCAAATTTTTTATTCA
AATTTAATGAAATTTATAGATCTTTCATATAACTCTCGGACGGGAATAGT
ATACACGAAACACATCTTCTATATAAAAAAATATCATTTGGGATGCGCAC
TGTATAAAGGAAAGGCGTTACGGCGGCAGGTTTAACTCGACGTTTTCTCA
AAGCATTTTTTCTGATCTTTTACTGAATGATAATCAGTCAAGTTTTATTC
TCTTCAAACTTTAAATTAGATACCCAATACATGAGAATTTTCTGCAGGTT
TGTTTCGATCTTTGTTCTAATTTAGATGGTCGACTTTTTTACATTTGTTG
TAAAGGACGGAAGAATTGGCAACTTGTCAAAAACACGGAGGAACAAAGCA
GACCATGTAGATGAGGGCTTAAATTTACATTTCGCTTATTTTTGCAATTT
GNTGTCAAAAATACGGAGGGAAAAAGCAGACCATGTAGATGAGGGCTTAG
ATTTACATTTCGCTTATTTAAAAATGGTCGAATTTTCTTTACTTCATAGA
TATCGAACTACAGTGAAAACATAAGAAATATGACCATTTTTAACGAGACG
ATATTTTTGGGAACTGGGGACAATAACATACTGAGGATGAGCATCGAGTT
GGGTTGCAATGATCCTTTGCGCGAGGTGAAAGATTCGCTGTGCATTGTTA
ATGAGGTAATTTAATTTCATCAATACCTTGACCTTTTAAAGGGGACATCG
CAGAATATAGTCTGTTTGCCACTACGCATCAATTTAGTTAATCTTTTAAA
GGGGACATCCCAGAATATAGTCTGTTTGCCACTACGTGTCAATTTAGTTA
ATCTTTTAAAGGGGACATCCCAGAATATAGTCTGTTTGCCACTACGTGTC
AATTTAGTTAATCTTTTAAAGGGGACATCCCAGAATATAGTCTGTTTGTC
ACTACGCATCAATTTAGACAGAATATAGTCTGTTTGCCACTACGTGTCAA
TTTAGTTAATCTTTTAAAGGGGACATCCCAGAATATAGTCTGTTTGCCAC
TACGCATCAATTTAGTTAATCTTTTAAAGGGGACATCCCAGAATATAGTC
TGTTTGCCACTACGCATCAATTTAGTTAATCTTTTAAAGGGGACATCCCA
GAATATAGTCTGTTTGCCACTACGCATCAATTTAGTTAATCTTTTAAAGG
GGACATCCCAGAATATAGTCTGTTTGCCACTACGTGTCAATTTAGTTAAT
CTTTTAAAGGGGACATCCCAGAATATAGTCTGTTTGCCACTACGTGTCAA
TTTAGTTAATCTTTTAAAGGGGACATCCCAGAATATAGTCTGTTTGCCAT
TACGCGTCAATTTAGTTAATCTTTTAAAGGGGACATCCCAGAATATAGTC
TGTTTGCCACTACGCGTCAATTTAGTTAATCTTTTAAAGGGGACATCGCA
GAATATAGTCTGTTTGTCACTACGCATCAATTTAGACAGAATATAGTCTG
TTTGTCACTACGCGTCAATTTAGACAGAATATAGTCTGTTTGTCACTACG
CATCAATTTAGACAGAATATAGTCTGTTTGTCACTACGCATCAATTTAGA
CAGTAAAAACTACCGGCAAACACCATGTTTTCGAATGATGCTGTTTAACC
CTTTAAGTGCCGATGTCGTATATATACGACATGGGCTATATAGGAGGGCG
AAGCCCTCCTGTATTGCCCAGTTTGATTTAGAAATCGTTATTTTTGGTCG
AACTCGTAGGAATTAGATTGTCCTTTATGGTCAAGCAAAAAAAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGAAAGAGGAGACTCTAAGCTATCCAACGAGCTA
TATACGAGCTTCTAATTCATTCTAGATCAGAAGATATAAGCCCTTAAAGT
TTGAACTAGCAATTTTAAAAAAAAAACTTAGAAAAAAGGACCCTGGCACT
CAAAGGGTTAAAAAATTTCAAACGAGTATTATTATATAATACCTCGCTTA
AAGGCTCGTGAAAATAAAGAGTAAAAATTCACTTCTGAACATCCGGGAAT
CAAAAGGAGTATACTTTTGGCTTTTCATTAATATAATAAAGCCCTGAGTA
CATACAGTGAAGTGGACTCGAAAAAATTAGTTTCTGAACCTTTAAAGTGC
TAGGAATCTAGGTATGAGTTCAACAGGGAGGATCTTCACACTAGTTCGGG
CCCTTAAAAAAGGGTGGGATGACACCTTCCGTAAAAATGAAGAAGGGGGG
TAGTCAGAAATTTTAATGAAAAAGAGGGGTAGCAAGGAAAAGGGGCTTAC
ATATATATTGCAGTTCTAAGCACTGTTATGAAATTTGGTCCTAATGAGAG
GGAGTTTTCTGTTAGAGTAGTCTGAGCCAAAAAAAGAAGAAAGAACTTTA
TTATTTGCTTTCTCTCTCTAAAGATATTTCACATATATTTGTTAGCTATT
TTTGTCCAAAATCCTTGGGGAAAAGGCATTTTTAAAGGTTGGGCGATGCC
AAGAGGGGGGGGTCAGACCCCTTTCCGCACTATGCTTCAAACTTAACTAG
TTTTCTGAATTTGTTGCGTTGATGTTCTTACAGATACGGGCTTTTACGGA
GATCACTTCCCCCCAACTCTTAAACAGTCTCCTAGCACTTTATGGGTTAA
TCTGTGTTTTTATCATTACTATTAAAAGCTGGGCTGATTTAAGAGCTGAT
TCTTATATTGGAAGTGAATTCTAGTTCGAGCATAACATCATCTAATATAC
AGGGTCAAGATGACGTCATCAGTGGTCTGGCAACAGATCCAATTTACAAA
GAAAGCATGTGTAGTCTTTCGGCTGACGGCACTTTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012993XLOC_012993Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023121-exon-sc0000443-1575043694:75677..75757TCONS_00023121-exon-sc0000443-1575043694:75677..75757Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1575043694:74980..75120TCONS_00023121-exon-sc0000443-1575043694:74980..75120Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1575043694:73495..73549TCONS_00023121-exon-sc0000443-1575043694:73495..73549Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1575043694:72652..72756TCONS_00023121-exon-sc0000443-1575043694:72652..72756Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1575043694:72385..72474TCONS_00023121-exon-sc0000443-1575043694:72385..72474Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1575043694:71100..71249TCONS_00023121-exon-sc0000443-1575043694:71100..71249Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1575043694:70362..70619TCONS_00023121-exon-sc0000443-1575043694:70362..70619Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1575043694:69253..69408TCONS_00023121-exon-sc0000443-1575043694:69253..69408Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1575043694:66072..66155TCONS_00023121-exon-sc0000443-1575043694:66072..66155Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1510915933:75677..75757TCONS_00023121-exon-sc0000443-1510915933:75677..75757Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1510915933:74980..75120TCONS_00023121-exon-sc0000443-1510915933:74980..75120Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1510915933:73495..73549TCONS_00023121-exon-sc0000443-1510915933:73495..73549Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1510915933:72652..72756TCONS_00023121-exon-sc0000443-1510915933:72652..72756Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1510915933:72385..72474TCONS_00023121-exon-sc0000443-1510915933:72385..72474Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1510915933:71100..71249TCONS_00023121-exon-sc0000443-1510915933:71100..71249Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1510915933:70362..70619TCONS_00023121-exon-sc0000443-1510915933:70362..70619Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1510915933:69253..69408TCONS_00023121-exon-sc0000443-1510915933:69253..69408Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1510915933:66072..66155TCONS_00023121-exon-sc0000443-1510915933:66072..66155Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1491911889:75677..75757TCONS_00023121-exon-sc0000443-1491911889:75677..75757Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1491911889:74980..75120TCONS_00023121-exon-sc0000443-1491911889:74980..75120Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1491911889:73495..73549TCONS_00023121-exon-sc0000443-1491911889:73495..73549Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1491911889:72652..72756TCONS_00023121-exon-sc0000443-1491911889:72652..72756Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1491911889:72385..72474TCONS_00023121-exon-sc0000443-1491911889:72385..72474Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1491911889:71100..71249TCONS_00023121-exon-sc0000443-1491911889:71100..71249Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1491911889:70362..70619TCONS_00023121-exon-sc0000443-1491911889:70362..70619Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1491911889:69253..69408TCONS_00023121-exon-sc0000443-1491911889:69253..69408Clytia hemisphaericaexon
TCONS_00023121-exon-sc0000443-1491911889:66072..66155TCONS_00023121-exon-sc0000443-1491911889:66072..66155Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000443supercontigsc0000443:66072..75757 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.646212	0	0	0.365847	1.3949	0.995144	0.86491	0.783342	1.2685	1.96848	0.837754	0.822156	0.867133	0.725899	0.933371	0.295673	1.151e-05	0.315892	1.0322	0.0588425	0.0242701	0	0.24963	2.04221	1.1284	0	0.235633	0	0
Blast
[Close]
BLAST of TCONS_00023121 vs. Swiss-Prot (Human)
Match: EMAL2 (Echinoderm microtubule-associated protein-like 2 OS=Homo sapiens GN=EML2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.929e-21
Identity = 88/358 (24.58%), Postives = 148/358 (41.34%), Query Frame = 2 
Query:   65 LQLDWVYGF---DSLVGIEASSTNQILFTCGRVAVTMDTKQHKQRFFRKHSQDITCFALQDD--TAATVQCW----DGKKC--MVYVWSTVDMATISTLYVDQYEAAIFKKIAFLSETLLVAIIESGGVNLGCIFNVKDSDPVST------TKIPDAFNG----ITTYYQPTATNLHFAIFGKDECRLCFYEYNNNHIISNKAANFGTLPKPKSITFALFSGKEDLLTGDSNGTILLWKRTTLKIERVVNNAHASWISSMCISQTGILFSSGNRDGLVKAWSRDLKLAVSIVSISNYSENIRNMTIFNETIFLGTGDNNILRMSIELGCNDPLREVKDSLCIVNEGQDDVISGLATDP 1075
            L+L+WVYG+   D    +    T +I++    VAV    ++ +QR +  H+ DI C A+  D  T AT Q      +GK     V +W +V ++T+  L +  ++ A+            V   +S G NL C  +  +   +S       TK+ D        +   + PT   +     GK        E  +   +S +   F    KPK +    F    D++TGDS G + +W +   +I + V  AH   +  +C  + G L S G RD  V  W  D      +    ++           +T+++GT  N+IL+ S+  G             ++ +G  + + GLAT P
Sbjct:   55 LKLEWVYGYRGRDCRANLYLLPTGEIVYFVASVAVLYSVEEQRQRHYLGHNDDIKCLAIHPDMVTIATGQVAGTTKEGKPLPPHVRIWDSVSLSTLHVLGLGVFDRAV----------CCVGFSKSNGGNLLCAVDESNDHMLSVWDWAKETKVVDVKCSNEAVLVATFHPTDPTV-LITCGKSHIYFWTLEGGS---LSKRQGLFEKHEKPKYVLCVTFLEGGDVVTGDSGGNLYVWGKGGNRITQAVLGAHDGGVFGLCALRDGTLVSGGGRDRRVVLWGSDYSKLQEVEVPEDFGPVRTVAEGHGDTLYVGTTRNSILQGSVHTG-----------FSLLVQGHVEELWGLATHP 387
The following BLAST results are available for this feature:
BLAST of TCONS_00023121 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EMAL22.929e-2124.58Echinoderm microtubule-associated protein-like 2 O... [more]
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