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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023045 ID=TCONS_00023045|Name=TCONS_00023045|organism=Clytia hemisphaerica|type=transcript|length=231bp
agtgaaagaaaatgaaaaataaagaaaacactATCTCCTCTCCCCAGGAA
AATTTGTCGATTTGTCATCATAGACTGTTACAGAGAAGTATTACAAGACT
CTTGGTATTGCCCCTTAATGATCACTTGAGAAAcacttcaaaaaaaaagt
tgagggAATGTAgtgttttgattggttgaattaGATGAAACAACATCTTG
TCAGTCATAAACTTCATCATAAAGGTATGGc Run BLAST on NCBI transcript from alignment at sc0000439:80978..82397- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023045 ID=TCONS_00023045|Name=TCONS_00023045|organism=Clytia hemisphaerica|type=transcript|length=1420bp|location=Sequence derived from alignment at sc0000439:80978..82397- (Clytia hemisphaerica)
AGTGAAAGAAAATGAAAAATAAAGAAAACACTATCTCCTCTCCCCAGGAA
AATTTGTCGATTTGTCATCATAGACTGTTACAGAGAAGGTAAGAAAGGTG
GCTTCTTGACTTTCATGTCTGTGTATTCATTGCAGCTGTAGAAAATAGTT
TTCAGACTCGGGGCTTACCAGTACTATACGCTTTTTTATAAGAATGGTTT
TTGAATTTGCCATTTAATACTTGTTTTTTATAAGAATAAAACTATATAAG
AACATAAGCCTTCGATTACCAAATTTATTAAGAACATTTTAAGGCTTTTT
GGACTCTAAGCACTCTAAGTAAAAAATAAGAAAATAAGAACACTTTTAGG
CTTAAAACTCAAAAAGTTAAGAACATCCGGAGTCTTAAAAATTTTGCATG
TTCTTATAAAAGAAAAACGTAACCATTTGGGAAAGTTGTCGAGAATCTTT
TTTAGCACAAACATCATTTCAGAACTACGGAAATGCTACGAATATCTCAT
CCTTATTGCTAGTTTCCCGAAACCCTTCAACCAAAACAAAAATTACTATT
TTTATAAAGAAAACGTGTATTTTTAAAGAAGTATACACTTCTTTTTTTTA
TAAGAACCAGTAAATTTTTGCTGAGGCTCGGCTGTTCTTATTTTTTTGGC
ACTTTGATTCTGAATTGTTCTTATTTTGTTCTTATTTTTTCTAAGGTAAA
AAACAAGTTTTGGCTATTTACTTTACTATTCAGAGGATTTTAGAAACCAG
TGATTCTTTTTGCTATAATTCTCTAACTTCAGCCTCTCCACCTGTTCTTA
ATTTGTTCTTATTTTTTGGCATTTTTGAGCCTCATTGTTCTTATAAAAAA
AAGTGTACTTTAAAAAGATGCCTCACTCAGATGAGTCACTCACCCCTTTA
GTTCATTATAACCAAACCGTTTAAAAAATATTTTTGTTTCACTTCACGAC
ATGATGCAAAAATAAACATAATTTCAATTTTAGGCGAAACAAAAAAAATT
TCTTGTTTCCGGAAACCAGCCGGGTGAAAAATTTTTTTTTTCTGACCCGG
CCGCAAACTTTCGTTCGTTAGCAGTCCGTACTTGTTGTAATTTAGGGCAT
AATTTATGCTGTGTTTATACATAAAAGTTATTCTTAAACTCTATTTCAAT
GAGCCATAAATTATCAAGAATAGCAAAAAAAATTATTTTCCGGCCGGCCG
CATGATAACTTTTTTCCTTCACCCGCATTCTGGAAACAAAACATTTTTTA
TCATTCGCCTTATGATTGTTATTTTAGTATTACAAGACTCTTGGTATTGC
CCCTTAATGATCACTTGAGAAACACTTCAAAAAAAAAGTTGAGGGAATGT
AGTGTTTTGATTGGTTGAATTAGATGAAACAACATCTTGTCAGTCATAAA
CTTCATCATAAAGGTATGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023045-exon-sc0000439-1575043694:82310..82397 | TCONS_00023045-exon-sc0000439-1575043694:82310..82397 | Clytia hemisphaerica | exon |
| TCONS_00023045-exon-sc0000439-1575043694:80978..81120 | TCONS_00023045-exon-sc0000439-1575043694:80978..81120 | Clytia hemisphaerica | exon |
| TCONS_00023045-exon-sc0000439-1510915933:82310..82397 | TCONS_00023045-exon-sc0000439-1510915933:82310..82397 | Clytia hemisphaerica | exon |
| TCONS_00023045-exon-sc0000439-1510915933:80978..81120 | TCONS_00023045-exon-sc0000439-1510915933:80978..81120 | Clytia hemisphaerica | exon |
| TCONS_00023045-exon-sc0000439-1491911889:82310..82397 | TCONS_00023045-exon-sc0000439-1491911889:82310..82397 | Clytia hemisphaerica | exon |
| TCONS_00023045-exon-sc0000439-1491911889:80978..81120 | TCONS_00023045-exon-sc0000439-1491911889:80978..81120 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000439 | supercontig | sc0000439:80978..82397 - |
Blast
The following BLAST results are available for this feature:
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