TCONS_00023042 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023042
Unique NameTCONS_00023042
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2581

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023042 ID=TCONS_00023042|Name=TCONS_00023042|organism=Clytia hemisphaerica|type=transcript|length=2581bp
aaatcttttataatttttttctaatcacGCTAGGAATACAAAGAAAACCC
AAATTGAATACGTGATTTTACCCCCAGCAAAGTTGGGATGGCATTTAAAA
GTCAGGGCGttagttcaaaatttccttttgcaaaagttttaaTCAATACG
CAAGGTAGCAAGCAAGCAGGAGGAAGAATGCTGAAAAAGgttgtatgGTT
ATTTACTTTTGTGATATCTCTACTGGTGGTCAGAGCATATTCCACCAAAG
ggaaaattgattttgacattAGCGAGCAAAACGAAAAAGACTTCAAATCT
TTTTGGCTCTTTTTGATTCAACACTCACAACCATTCAACCAAAGCTGTTT
GGACTTGATCAATAATGAAGAAAGAAACCATTTGAAATCTATTACAACAA
TCGTAAGAAAGAGCCAAGAATGCCACCAAATCAACAAACCTACTTCAAAT
GGAAACCAGGTTTATTATGGCCAGTTAAATGGTACCTTCCAAGTACTGAG
AAATATCCGAATTAAAAAACCAACCATATTTTTAAAACACGAAAAAAACA
AATCGCCAACCCTGGTGTTCGGTGTCATAGATTTCCCTGGAATCTCACTT
AAACTAATTGAAGAGAACAATGTAGTAATCAAAATCAATAATGATGATGA
AATTACAATAAAGACTTTTGGTAAAATCAATTTCAAACCATCTTGGGTTG
ACACTAATCTAGTGAATATACAGAGATTCAAAAGTCGAAAAATCCAGTAT
ATCTCACGCTACAATATCAATTATTTCACCAATTTAGAAGTCAGTCAGGA
TACAAGATTATTGGGTACTGAAAATAGCATTATTATGCAAGATGGAAATT
CAACATTCAAAACACTTTATCCTAACATGGAGAAATCAGAAATTGAACAT
TACCACGATGTAGAATCTGAAATGTTGATTCTTGGACATGATTTTCTTGG
AGTTTATCTAAGTTTAGAGATGGTTGAAACGAAACATTTGTTAAAAATGA
TATTACCGAGATTTCTACATCGAAGTGTTTCCACCCCAAAAATGAAGgcG
AACATAGTTCTACTACGTGGTCCTAAAAATTTGAAGCTTGATCAATACGA
CACGATGGAGAGACAGGAGAAACTAATGAAAGTATCGACTGTCTATAGCT
TGATGAACAAGTACAGATTCTACAATGGTCTGCTGATTGAGCTGTTTGGA
GCAACACCGAGCCGATATGATACTAACTCCAAATTCCCTTCGTATATCTA
TCCAGAATCACAAGTTCAAGTTATCATAAAGTATTCCAAAATAATGAAAG
TTCAAATACTTTTCCACAGACAAAACGACACAAAATGCATGTCAACAAAG
GATGAATCTTGGTCAAGCCTACGAAACACTTTGTCAAAAATGAAGAAGTC
ctcatcaaaaacaaaacatgaagAACATTCAATATCACATTTAATACACC
CATATTGTGACCATGACCAATATCTTTTACACTCAATCGAGGTCGAATTT
GACAGCTCAAGATTAATGGGTGTTTATAATATGGTTGTGGAATATTTGAA
TGGCGGAAAGCTTAATGTTGATCACTTTAGTGGagcaaatatttctttat
attcAGTTATGTTTTTTATGTTCAAAGGAACTTAAGCATAAGTCTACGAA
GgataatttcaaaagaattaagGTACCTGCTTCAGGCAAAACTTAGCCCT
TAACcttttccaggggggggggcactctaagggtgtataATCTAGAAAAT
ATGACCATATTGTccctgaaaatggtcaaaaactttcaaaataatgCACC
TTAAGGGCCGttttttcgcccaaatttactcaCATTTTGCTAAATTCTCT
CTGCATTGTAAGGGTttgatttcaaaggcctaattttgggccgagTACAT
CCCACATGGGACCCTATACTCaactatgaaaatattttcactaGCAAAAT
GGATCTTAACattgctttttttatttatgttCTTGTATCGATTGCAATGG
ATTTTAGGATATGATTAAGCGGTGGAGCCCGCTTCAATTTCTCAACATCA
CATTcgtttgatttattttgattaCGTAATCAATCCACTCAAACTCTACA
AGTCTTTGCAAAAGTTTACAAGTTTACGGACTGCAATTgggctttttcaa
aaaatttccatacagggtgGACGGaacttttcaagtcaaaacaaatttct
tggaaatgtgtggataccccccggaaaatagcaaaatttgcaaaaaagac
CCTGGAAAATCTCTTAAaggtgagggtggacgaactaataTCAGTCGTTT
ACCCCCCTGGAAGTTTAAGAAtagctttttaccccctggaaacaTGAAAA
AACATTTCCTTACAcctcctggaaattcttctcagtttaccccctggaaa
agtttgtcCACCCCTGTATGGTTATCTAATGGCccattttttgagcaaat
ttataatttattaggaattttttaaacttaaatTTGTATTCCATTTTTTA
CGGACGCCCTGTGATAATTTCAGTTGAAATTCAAAGAGGATTAGGtgata
aaaatgataatagACCAAGGTCTACATATTT
Run BLAST on NCBI

protein sequence of TCONS_00023042-protein

>TCONS_00023042-protein ID=TCONS_00023042-protein|Name=TCONS_00023042-protein|organism=Clytia hemisphaerica|type=polypeptide|length=515bp
MAFKSQGVSSKFPFAKVLINTQGSKQAGGRMLKKVVWLFTFVISLLVVRA
YSTKGKIDFDISEQNEKDFKSFWLFLIQHSQPFNQSCLDLINNEERNHLK
SITTIVRKSQECHQINKPTSNGNQVYYGQLNGTFQVLRNIRIKKPTIFLK
HEKNKSPTLVFGVIDFPGISLKLIEENNVVIKINNDDEITIKTFGKINFK
PSWVDTNLVNIQRFKSRKIQYISRYNINYFTNLEVSQDTRLLGTENSIIM
QDGNSTFKTLYPNMEKSEIEHYHDVESEMLILGHDFLGVYLSLEMVETKH
LLKMILPRFLHRSVSTPKMKANIVLLRGPKNLKLDQYDTMERQEKLMKVS
TVYSLMNKYRFYNGLLIELFGATPSRYDTNSKFPSYIYPESQVQVIIKYS
KIMKVQILFHRQNDTKCMSTKDESWSSLRNTLSKMKKSSSKTKHEEHSIS
HLIHPYCDHDQYLLHSIEVEFDSSRLMGVYNMVVEYLNGGKLNVDHFSGA
NISLYSVMFFMFKGT
Run BLAST on NCBI

transcript from alignment at sc0000439:190010..200634+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023042 ID=TCONS_00023042|Name=TCONS_00023042|organism=Clytia hemisphaerica|type=transcript|length=10625bp|location=Sequence derived from alignment at sc0000439:190010..200634+ (Clytia hemisphaerica)
aaatcttttataatttttttctaatcacGCTAGGAATACAAAGAAAACCC AAATTGAATACGTGATTTTACCCCCAGCAAAGTTGGGATGGCATTTAAAA GTCAGGGCGttagttcaaaatttccttttgcaaaagttttaaTCAATACG CAAGGTAGCAAGCAAGCAGGAGGAAGAATGCTGAAAAAGGTAAGGTCTTT TATTGTAAATAATACATACAGCGAAATCAATAGAACCACAAAGTActcaa gaaaattcgaaaaagttCGAGCGAAATAATAATATCAAGTATTCAAGAAC TAACTTTAACTTACTACACGGTGTTTCATGCTGTCTCAATCTTCAGGCAG TGCAGTGTATTgtaaaatgcaataaaaaaaagtttccctatcaaaagtta tggctctTTGAAGAGCTGTCGGTATTTTGACCCCTCTACTACGAGTACTC TATACAAGTATACTTGTAGTTGGCAATAAACGTTTTAACGGGAAATAATC AATAACTCGAAATTAATTTTACGTATTTTATAAAATGTTCTGACCTTACA CTTTCGATGCATACCAGAACAGAATAAGCTAATAAATTTCCCCCCGGAAC TTAggcaacaaaaaaaaactaaaagtcGAAATGGTCTCGCTAGGGGTTGG AATTCCGACCTTTTAGGCTCcctcaaaatatataaaaaccacgaaaaatc aaaaagggtACAAAATCTTTAGAAATTCGTCTCCCAAAGGGTCAATGCTA AAATTTACTCACATAACGGTTTAGCCTGGACAGCCAGAaggttgtaaatt tttttttatattttatgttgCTGGTTTATAGCCTAGTCTTCCCNTAGCCA GAAGGttgtaaaatttttttatattttatgttgCTGGTTTACAGCCTAGT CTTCTGAAGCGATTTGCATTCCAATACCAGAAAACAGCGCATGTGTATAC TTTGTTAATTCAAATATTGCGCAAAGCTAAAGTTTTGCCAAGCCTGAGTT TACAAGCAAGTATGTAGACCAAGCTCAAAATAGTAGAAACATCGAAATAG GAAAACAATTAACACCTTGTGGATATCTAGGCTACAAAGGGAAAGTTTTC GGATCTCCTGTCCACACATACCTTACCATGCCTATCTAACCCTTACCTCC TTTGAGAAGATTCAACTTTACAATAACGACAAAAGCGAATAAAAGGCTCA GtcgaacaaattttcttttaagaacaatacaatatttttatagGAACGCA TTTCATAGGAGCTAGGAAACACAAAAACgccgaaaaaaataaaataaatc aaaaaaattgaaattattNCTAGGAAACACAAAAACGccgaaaaataaaa taagtcaaaaacattgaaattattTGATACTAAGCAAATTATTGGCCCTA ATCGTAAAAATAGGGTATGTCAACCCTATTACAGCATACCTTATTTGTTA AGGAACAATTATGTTTAGGAAAATTAGGAACAGGTTAAGAAGATCATGGC TCAAACggcaaaaaaacattagaacagccgagcaataaaaaatatttttt aaacctNGGATTCAAATGATAGAGAACGTGTTAATGAAGCAAAAGAAGAA TTAAATAGAATGTTGAATGAAGATGAACTAAGGGATGCTGCTCTTCTTGT CTTCGCTAACAAACAGGTAACAATTTTATGCCAGGCTCAACTGACTTTTT GGTTGAGGGATCAAGAATGATCAAAACCCTTAATATTACCAATAGACGAT ATCAGCTttaccgaattctccccgaacgattacccatgatgcattgcgca aaaaaattcacggacgataaccCAAACCCTGActatgcatcatgggtaat cattcggggagaattcagaAAGCCGAAATCGTCTATAGGAGTATGGAAAA ACCTCAGCATATGAGAGTATTGTCAGTTTTAAAATTAGTTATCATATATT GAGCACACTTGTGCTAATCAGCGCCACAACACAAGTTTGATTATATGATA TTATTATTTACCAATTTAGATAAAAAAGGTGCGATTCAGCAGTGTTTCAG CGCAGTGGAATCATCTTATTCGAGcgttaaaaataaataaacaagttATA AAACTGCATAGTGAAGTCAGGTAAAGAGGCACTTTAAGACCACAACAATT gacttttcaaaatagaaacCGAAAGCCATTAGCTCTCTCTCTCTTCTCTC TCTAGCAAAACCGGAAAATCTAAATCTGTACTAGCCTTTTTCTTACTAGG ATTGTCGGGTATTCCGTCTTCCCCTGCTAGAAACTACGTTGTAGTCTCCA TAAGTCGAAAAAGCAGGGGGgacgcaaatttgttcgagataaagaaattt cgatttatgAAATAAGGTTTATAAGGAATTGTTAACTAAACGGGTCAGAA CTCTTGTTCGGGTTAAATAGATagtcgagttatagaggttcgagacTATA AAATCGCCGGAGGTACTAAACTATAcaggaaagaaataaaaagatgTAAT GAAAGAAGCTAAAAATGTATTGAAGATGACTATAATTGGATAAATCTTCG CGAGCTTTAATTTTACGAGACAAAAAATTCGCGCAATTTTCCGGATTTAT TTTCGCAGATcactcttttgaaaaatttcgcgtggatttaatttcgcaaa tcagctaaaaacaaaaattgaccCTTTAAACGTCAAAAGTGGCATATTTA TGGTGTATTTTACGCTGAAAATTTGATTTCGAAAATTTCGcttggattaa attttgcaaatcagctaataagaagtgtccgccttttagaaatttttcaa atctgtGCTCTAAAATATTATAAGTATATTAGTATAAGGTACTATTAAGG TGTTAAGTATGTAAAATTTTGATCCGAAGTGCTTTTCTAGAGACACTAGG ATatagaagaacaagagaatGATTATTCAAAtgcaacaatttagtttttt aTGAATCACAGTAGTATTGAAGTCCCTGTAAATTATCAATTTCATGACGT AAGCAAATTCACCAACTGGATAAAGGGAGCGCTCCAAACGTTTATAAGCA ACTTTGAAGTGTTTAAGAAATAAATAGTTTAGGTAAATCAATTCATAAGT CTGCGACCAGTTTGACCAGAAGTTTTTCCGTCtatgtccgctaattagag aggAAAAAGTAGGGTTCCGGCCATTTCGTGCAAAAAACTTTGTCCGCTAA TTgaagggtccgctaattgagtgtccggcTTTTGGAAgctttttatgagg atttgactaggaaatggccggggtaaataaaattttccactagtcagagg tgtccgccttttagagtgtccgttaattggaggttttactgtatatGCTC GAAAATTGGGTAAACTGTCATTGCCAGATGCTTAATTCAATGTAAGTCAT TCGCATCATATGAGAGGACTCGTTGGTACAGTCCTGTACCAAACTTAGAT CTAGGAGTTATATAAAAAATGGCGGATTGGCGGTCCTCTACgtttaaagc tctaaaggagtgggCTAATTTCCTATAgaagaggaatgatagtcggtcTT TCATGTACCACATTCCCAGACGGGTTAAACTACCCTTACACGTAAATCtg aaatattttggttggacctgctaatccccgaaaacgagggctggatTCAA GGCCTCCAACTGCAAAACCAACCGTAATCTAACCTTCCATATGTAGAAAA TTTCCCGACTCTGGGAATGCGGTACATGAAAGACCGACTACCATTTATTC CTCTTCTATAGGAAATTAGCCCACTCCTATAGAGCTTTAAACGTAGACGA CCGCCAAAGcgtgaaaatttctgcatctgggaGTCAGATAAATATAGAAG CGCTCCGATCCACCCAATAGAAAAAATTTTATTCTGGTCAGAAAGATCTT GATCAGGCCTTTCAATGATCGATTTTTGCGTTTAGAAATTCTGgttggta aaaaatgaaagaaattttataCACTTGCcaaaatttgtctatttttggaT AAGTTAAAAAAAACCTAAATCCTTTCGCTCTCTCGTGACCGCAGTGCATG CACTTATATGACCGTCATTAGGTCTCGAAAAAAAAACGAAGCAGGGAACT TTTAAGTAAACACAAAGCCAAGTCGAACACGTCAAGACACGTCAACTGAC GTCAATAACACGTCAATTAACGCACAAAAAAACAGGCTTACAGTTGATTC TCCATACCTCGAAAATGCACGGGAAACACAAATgtattcgagttaaggaa atttcgaattatggagtaaggtttataaagtAATAACTGATATGACCATc taacttgttcgagttaaagagatattcgagttatatAGGTTCGAGTTAAA CAGACTAAACTGTAGCCCGGACGAGTCATAAAAATGCAATTAACTTATGG AAAAATAATCATTTATCTTAGAGATGggaaaactttcttttcaaGGCCGC ATAAATGGAGTTTTCATATTATACAGAAAGTAAAAAccatattacttcga ataaacgctccctcaaataaacacccccttcgaataaacgcctcccCCTA GGAGGGGCATTTGTAAAGGAAgtataaaaggaaaaaaaaactctattcTT TTTATATTAAAACTGGTTTCGACCCATTTCTATATGCCTAAGTAAATCGA CATATTTGTACCAACAAAACAAGGTTCCAATTCACGTTACTAACCAACGT GACCTCGTTTATTAATCAATTGATAAATTAGCATAATTTGCAGAAATAGT GAACTGACTTttgatttaattatttcttAATTTTGATGGGAACTCCTTTA AAACTTCAGTTGAGCTCTTTTCCGTTTCAGCAaaaacaacaatcaatcaa tattTACTACAAAATATTTCTGTCATGACTattatgacgtaatattttGT CATGCGCATGCACGCAAATCAAGGGCTTGGAAAActaataatttttgttt gaaaatttcaaacttacaccATTTGTTACATAAAACAGAGAAACATGGGT ctgattttggattttttgggTGTTTCTCAGGAAAAATGGCCTAATTCTGA CTTCTGATTTTTTACCAGCCTAGGAAATAGGTTAGTAATTGTTTAAACTA AATTTGTAATTNGCATATCGATAttaaaatgatgattttttaCCAGCCTA GGAAATAGGTTAGTAATTGTTTAAACTAAATTTGTAATTTCTTTTGTCTC TCTACAATACACAGCAAAACAAGAAGGTTTtggataaaaatattttcttg gaCCACGAACAAATAATTCAAATGTATATAGGGCAAGACCAATTTAATtg gttctacgggcagatcgttcgACAAttatgagtcggtcggtcggtaaaat aagaataaatttttcattcatcagggttggtaaggtaccgaaaatatttt ccaaaaaatatctggatcaaaaattcacttttttatctttcgatgaagat cataataaaatttggAATGTATGGAAtgtttgattttctaatttttccaa tttcttgaattaattttcagctttactcaaaataactagtgtgtaaaatt caatatcattattttttttgattttagcaaaaattagGTTGGTCGGGctc gtagaacaacaaattaaattggtcttgcCTAAGTGAAAAACTTAGaactt aatttaatttaatcttatgtttttttcaggttgtatgGTTATTTACTTTT GTGATATCTCTACTGGTGGTCAGAGCATATTCCACCAAAGGTATTGGTCT CTAACAGTCTCTAGCTTTGAAACtggttttaattttcttaacttgatgat tttaaagaaatactttcaaacttttggccTATAGATTATTTTTTGAGCAG TTCTTTTGCCATTGATTTTTTCACATTCGGTAAGAAAAATGTTCATTTTA TTTCAACTTCAAGTACGGGGATACTAGTAACTGTATCTTGAAAAGGgaaa tgaaaaaagtaaaattaactttaagtggataccccttaaaacctacaaaa aatagAGGTAACCTTTATCTGAAAGTTTAGGTGGAatttgaggctgaaac tttttgtgttgaaattaCACTGTCTACGATTTTCTTCTCTAGCAGTGATC TTTTGTAGAaaccagttttcagtttttcatgaGGAATTGAAAAAACGCCc ttttagctatttaccccttcAAACCTACAAACATTGACCCCTTGCTCACA ACTTACTGAAATGGTGAGATTGCAATTCAGGTGCTGAACTGTGATTCAAT TGATATTTGCTAGATGACCAGGTTTTGAGAAAgtagattttcagatttta ttggccactaccattAATGAGCtttgaaatagaactttgagggcCTTAAG ATTTCTTTGAGGTCTAaccatgaagaagaaaatgatcttttcaTACCTGC AATGAGTAAAGTtacctaaaaagtataggttttatgaccttaaattcaaa tGTGTAATCTGTAGGTCCCAAAAACTTGATtctttgaagggatttttgat aaaattttgaataacttcgaattttacgACACTTTGCTGCCATAattgaa attttcgaaattagGTACTTTATGAAAGTACATTTATAAGAGTtcgtaaa aaagtgaattatacaatattaaattaagtttgATGGCTAAGACAGCCAAA AGTACAACTTTGTAGGTTTTGAGGGGTGTGGTTTTAAGGGATATCCACTG GTAGATCAACAACAATTTATCTAATTATCCTTTTATCAACCAATTTGTGG AGTTATGTACGATCATTAGTAAACTGAAATTtatgttttctattttcaat ACTGCTATTGTATTGAAAACTAtgtaaatttatttaaaaaaatttccaag agGCAATCGAATCTAACCATAtcataataaaacaaaattgaattaatttc aagagtattcaaagatttattttttgtaatttttcagggaaaattgattt tgacattAGCGAGCAAAACGAAAAAGACTTCAAATCTTTTTGGCTCTTTT TGATTCAACACTCACAACCATTCAACCAAAGCTGTTTGGACTTGATCAAT AATGAAGAAAGAAACCATTTGAAATCTATTACAACAATCGTAAGAAAGAG CCAAGAATGCCACCAAATCAACAAACCTACTTCAAATGGAAACCAGGTTT ATTATGGCCAGTTAAATGGTACCTTCCAAGTACTGAGAAATATCCGAATT AAAAAACCAACCATATTTTTAAAACACGAAAAAAACAAATCGCCAACCCT GGTGTTCGGTGTCATAGATTTCCCTGGAATCTCACTTAAACTAATTGAAG AGAACAATGTAGTAATCAAAATCAATAATGATGATGAAATTACAATAAAG ACTTTTGGTAAAATCAATTTCAAACCATCTTGGGTTGACACTAATCTAGT GAATATACAGAGATTCAAAAGTCGAAAAATCCAGTATATCTCACGCTACA ATATCAATTATTTCACCAATTTAGAAGTCAGTCAGGATACAAGATTATTG GGTACTGAAAATAGCATTATTATGCAAGATGGAAATTCAACATTCAAAAC ACTTTATCCTAACATGGAGAAATCAGAAATTGAACATTACCACGATGTAG AATCTGAAATGTTGATTCTTGGACATGATTTTCTTGGAGTTTATCTAAGT TTAGAGATGGTTGAAACGAAACATTTGTTAAAAATGATATTACCGAGATT TCTACATCGAAGTGTTTCCACCCCAAAAATGAAGGTATTAAAAGTTATTT ACAATATTCTAGCTAAATATTCTAACCAACCAGACCAATTGTATCAAGTT ACAAAGTCATTGCCAGGGCAATACTAGATTCTTTCGTGGTAGGTTAAACC CTTTCCAGACGCAAAGTCCACGGGGTAGCCCATACTAGTGACGAAAATTA AAACCAATATATCTCGAGATCTAAGCCTTCCCAAGAGCTCGTTCGGCTAT CGTTGGATTgagtagaaaattttgaataggATGGGTCAATTTGAGGCTCC GTACCCACGgcgaaatattttgaattttttttcagaatgtaCATTTCTCT CATCCGGCAAGGGTTAAAAAATGTCAAGATTTCTAATAATTAGGGGACCA AACTAAAAGGTATTTTCTTTTCCTGCTCAATACTCAAtagattttttcat aaattacgtcacgaacatcacttgcctcgtttgaaattattgccatgatG ATTAACTCTCAgcagcagattttattaaaactactttcttttcataaaaa aaaatcatttttctcaaGGGACGTAATAACCATgctaattgtttgaatac gaggcaagtgatgttcgtgacgtaatttatgaaaaggcctatcagattat tatgaaaaagatgaaaaaattagatGATTTATTTCCTAGGGGGGGGATTC AAATCGCGATAATATTGAATGAATGGATAGCATTTCTACAGCTGAAAGAA TAATGGCTGGATCGAGTTTTGGGTGACAGAGAGGATATTTTGACtcagaa aatatttacatcaTTTTGaacaaataatcaaaattttaaaaaatttgaag attaaaAACTTTCATTAGAGAAAAAACCATGAAGAACAAACAATATACAT CAGatcttcaatttcaatttcaggcGAACATAGTTCTACTACGTGGTCCT AAAAATTTGAAGCTTGATCAATACGACACGATGGAGAGACAGGAGAAACT AATGAAAGTATCGACTGTCTATAGCTTGATGAACAAGTACAGATTCTACA ATGGTCTGCTGATTGAGCTGTTTGGAGCAACACCGAGCCGATATGATACT AACTCCAAATTCCCTTCGTATATCTATCCAGAATCACAAGTTCAAGTTAT CATAAAGTATTCCAAAATAATGAAAGTTCAAATACTTTTCCACAGACAAA ACGACACAAAATGCATGTCAACAAAGGTAAACATCTCTATCTTAACTTCG ATCTATTGGTTAGAAATTACGTCATTTTCAAATTAACCGATAGCAAAGCT TAGTTTTAACATTAGCGAGTTTACGAGTCTACCCTTTTTAAGGACGGCGC GGCgactgaaacgatttggaaCAAAACACAGTTCTGAAACGGTAAAAGTG ACAACTTTACTGTCCTCCTCAGCCAGTTAGGGTCTAGAGAAATCAGCAAT GAACCAATTCCGTTGCAAGAAAAAGCGTCTTTGAGCTGCAAAACGACACA GTCTGgaagatattgaaaaaaaaaattatgttggtTCTTGAATTGTCATA CTTCAGATGAGATGTTTGAATCATTTAAAATGTACGTCCAAATGGTCATT CTtcatatgaattttttttaagcaaTATTTCGACCTCCTTAGTGGAGGTT TTCATCAGGTTTACAAACGTTCAAATTATGTTGGTATTTTTTAGGATGAA TCTTGGTCAAGCCTACGAAACACTTTGTCAAAAATGAAGAAGTCctcatc aaaaacaaaacatgaagAACATTCAATATCACATTTAATACACCCATATT GTGACCATGACCAATATCTTTTACACTCAATCGAGGTCGAATTTGACAGC TCAAGATTAATGGGTGTTTATAATATGGTTGTGGAATATTTGAATGGCGG AAAGCTTAATGTTGATCACTTTAGTGGagcaaatatttctttatattcAG TTATGTTTTTTATGTTCAAAGGAACTTAAGCATAAGTCTACGAAGgataa tttcaaaagaattaagGTACCTGCTTCAGGCAAAACTTAGCCCTTAACct tttccaggggggggggcactctaagggtgtataATCTAGAAAATATGACC ATATTGTccctgaaaatggtcaaaaactttcaaaataatgCACCTTAAGG GCCGttttttcgcccaaatttactcaCATTTTGCTAAATTCTCTCTGCAT TGTAAGGGTttgatttcaaaggcctaattttgggccgagTACATCCCACA TGGGACCCTATACTCaactatgaaaatattttcactaGCAAAATGGATCT TAACattgctttttttatttatgttCTTGTATCGATTGCAATGGATTTTA GGATATGATTAAGCGGTGGAGCCCGCTTCAATTTCTCAACATCACATTcg tttgatttattttgattaCGTAATCAATCCACTCAAACTCTACAAGTCTT TGCAAAAGTTTACAAGTTTACGGACTGCAATTgggctttttcaaaaaatt tccatacagggtgGACGGaacttttcaagtcaaaacaaatttcttggaaa tgtgtggataccccccggaaaatagcaaaatttgcaaaaaagacCCTGGA AAATCTCTTAAaggtgagggtggacgaactaataTCAGTCGTTTACCCCC CTGGAAGTTTAAGAAtagctttttaccccctggaaacaTGAAAAAACATT TCCTTACAcctcctggaaattcttctcagtttaccccctggaaaagtttg tcCACCCCTGTATGGTTATCTAATGGCccattttttgagcaaatttataa tttattaggaattttttaaacttaaatTTGTATTCCATTTTTTACGGACG CCCTGTGATAATTTCAGTTGAAATTCAAAGAGGATTAGGtgataaaaatg ataatagACCAAGGTCTACATATTT

Coding sequence (CDS) from alignment at sc0000439:190010..200634+

>TCONS_00023042 ID=TCONS_00023042|Name=TCONS_00023042|organism=Clytia hemisphaerica|type=CDS|length=7740bp|location=Sequence derived from alignment at sc0000439:190010..200634+ (Clytia hemisphaerica)
ATGGCATTTAAAAGTCAGGGCGttagttcaaaatttccttttgcaaaagt
tttaaTCAATACGCAAGGTAGCAAGCAAGCAGGAGGAAGAATGCTGAAAA
AGgttgtatgGTTATTTACTTTTGTGATATCTCTACTGGTGGTCAGAGCA
TATTCCACCAAAGggaaaattgattttgacattAGCGAGCAAAACGAAAA
AGACTTCAAATCTTTTTGGCTCTTTTTGATTCAACACTCACAACCATTCA
ACCAAAGCTGTTTGGACTTGATCAATAATGAAGAAAGAAACCATTTGAAA
TCTATTACAACAATCGTAAGAAAGAGCCAAGAATGCCACCAAATCAACAA
ACCTACTTCAAATGGAAACCAGGTTTATTATGGCCAGTTAAATGGTACCT
TCCAAGTACTGAGAAATATCCGAATTAAAAAACCAACCATATTTTTAAAA
CACGAAAAAAACAAATCGCCAACCCTGGTGTTCGGTGTCATAGATTTCCC
TGGAATCTCACTTAAACTAATTGAAGAGAACAATGTAGTAATCAAAATCA
ATAATGATGATGAAATTACAATAAAGACTTTTGGTAAAATCAATTTCAAA
CCATCTTGGGTTGACACTAATCTAGTGAATATACAGAGATTCAAAAGTCG
AAAAATCCAGTATATCTCACGCTACAATATCAATTATTTCACCAATTTAG
AAGTCAGTCAGGATACAAGATTATTGGGTACTGAAAATAGCATTATTATG
CAAGATGGAAATTCAACATTCAAAACACTTTATCCTAACATGGAGAAATC
AGAAATTGAACATTACCACGATGTAGAATCTGAAATGTTGATTCTTGGAC
ATGATTTTCTTGGAGTTTATCTAAGTTTAGAGATGGTTGAAACGAAACAT
TTGTTAAAAATGATATTACCGAGATTTCTACATCGAAGTGTTTCCACCCC
AAAAATGAAGgcGAACATAGTTCTACTACGTGGTCCTAAAAATTTGAAGC
TTGATCAATACGACACGATGGAGAGACAGGAGAAACTAATGAAAGTATCG
ACTGTCTATAGCTTGATGAACAAGTACAGATTCTACAATGGTCTGCTGAT
TGAGCTGTTTGGAGCAACACCGAGCCGATATGATACTAACTCCAAATTCC
CTTCGTATATCTATCCAGAATCACAAGTTCAAGTTATCATAAAGTATTCC
AAAATAATGAAAGTTCAAATACTTTTCCACAGACAAAACGACACAAAATG
CATGTCAACAAAGGATGAATCTTGGTCAAGCCTACGAAACACTTTGTCAA
AAATGAAGAAGTCctcatcaaaaacaaaacatgaagAACATTCAATATCA
CATTTAATACACCCATATTGTGACCATGACCAATATCTTTTACACTCAAT
CGAGGTCGAATTTGACAGCTCAAGATTAATGGGTGTTTATAATATGGTTG
TGGAATATTTGAATGGCGGAAAGCTTAATGTTGATCACTTTAGTGGagca
aatatttctttatattcAGTTATGTTTTTTATGTTCAAAGGAACTTAAAT
GGCATTTAAAAGTCAGGGCGttagttcaaaatttccttttgcaaaagttt
taaTCAATACGCAAGGTAGCAAGCAAGCAGGAGGAAGAATGCTGAAAAAG
gttgtatgGTTATTTACTTTTGTGATATCTCTACTGGTGGTCAGAGCATA
TTCCACCAAAGggaaaattgattttgacattAGCGAGCAAAACGAAAAAG
ACTTCAAATCTTTTTGGCTCTTTTTGATTCAACACTCACAACCATTCAAC
CAAAGCTGTTTGGACTTGATCAATAATGAAGAAAGAAACCATTTGAAATC
TATTACAACAATCGTAAGAAAGAGCCAAGAATGCCACCAAATCAACAAAC
CTACTTCAAATGGAAACCAGGTTTATTATGGCCAGTTAAATGGTACCTTC
CAAGTACTGAGAAATATCCGAATTAAAAAACCAACCATATTTTTAAAACA
CGAAAAAAACAAATCGCCAACCCTGGTGTTCGGTGTCATAGATTTCCCTG
GAATCTCACTTAAACTAATTGAAGAGAACAATGTAGTAATCAAAATCAAT
AATGATGATGAAATTACAATAAAGACTTTTGGTAAAATCAATTTCAAACC
ATCTTGGGTTGACACTAATCTAGTGAATATACAGAGATTCAAAAGTCGAA
AAATCCAGTATATCTCACGCTACAATATCAATTATTTCACCAATTTAGAA
GTCAGTCAGGATACAAGATTATTGGGTACTGAAAATAGCATTATTATGCA
AGATGGAAATTCAACATTCAAAACACTTTATCCTAACATGGAGAAATCAG
AAATTGAACATTACCACGATGTAGAATCTGAAATGTTGATTCTTGGACAT
GATTTTCTTGGAGTTTATCTAAGTTTAGAGATGGTTGAAACGAAACATTT
GTTAAAAATGATATTACCGAGATTTCTACATCGAAGTGTTTCCACCCCAA
AAATGAAGgcGAACATAGTTCTACTACGTGGTCCTAAAAATTTGAAGCTT
GATCAATACGACACGATGGAGAGACAGGAGAAACTAATGAAAGTATCGAC
TGTCTATAGCTTGATGAACAAGTACAGATTCTACAATGGTCTGCTGATTG
AGCTGTTTGGAGCAACACCGAGCCGATATGATACTAACTCCAAATTCCCT
TCGTATATCTATCCAGAATCACAAGTTCAAGTTATCATAAAGTATTCCAA
AATAATGAAAGTTCAAATACTTTTCCACAGACAAAACGACACAAAATGCA
TGTCAACAAAGGATGAATCTTGGTCAAGCCTACGAAACACTTTGTCAAAA
ATGAAGAAGTCctcatcaaaaacaaaacatgaagAACATTCAATATCACA
TTTAATACACCCATATTGTGACCATGACCAATATCTTTTACACTCAATCG
AGGTCGAATTTGACAGCTCAAGATTAATGGGTGTTTATAATATGGTTGTG
GAATATTTGAATGGCGGAAAGCTTAATGTTGATCACTTTAGTGGagcaaa
tatttctttatattcAGTTATGTTTTTTATGTTCAAAGGAACTTAAATGG
CATTTAAAAGTCAGGGCGttagttcaaaatttccttttgcaaaagtttta
aTCAATACGCAAGGTAGCAAGCAAGCAGGAGGAAGAATGCTGAAAAAGgt
tgtatgGTTATTTACTTTTGTGATATCTCTACTGGTGGTCAGAGCATATT
CCACCAAAGggaaaattgattttgacattAGCGAGCAAAACGAAAAAGAC
TTCAAATCTTTTTGGCTCTTTTTGATTCAACACTCACAACCATTCAACCA
AAGCTGTTTGGACTTGATCAATAATGAAGAAAGAAACCATTTGAAATCTA
TTACAACAATCGTAAGAAAGAGCCAAGAATGCCACCAAATCAACAAACCT
ACTTCAAATGGAAACCAGGTTTATTATGGCCAGTTAAATGGTACCTTCCA
AGTACTGAGAAATATCCGAATTAAAAAACCAACCATATTTTTAAAACACG
AAAAAAACAAATCGCCAACCCTGGTGTTCGGTGTCATAGATTTCCCTGGA
ATCTCACTTAAACTAATTGAAGAGAACAATGTAGTAATCAAAATCAATAA
TGATGATGAAATTACAATAAAGACTTTTGGTAAAATCAATTTCAAACCAT
CTTGGGTTGACACTAATCTAGTGAATATACAGAGATTCAAAAGTCGAAAA
ATCCAGTATATCTCACGCTACAATATCAATTATTTCACCAATTTAGAAGT
CAGTCAGGATACAAGATTATTGGGTACTGAAAATAGCATTATTATGCAAG
ATGGAAATTCAACATTCAAAACACTTTATCCTAACATGGAGAAATCAGAA
ATTGAACATTACCACGATGTAGAATCTGAAATGTTGATTCTTGGACATGA
TTTTCTTGGAGTTTATCTAAGTTTAGAGATGGTTGAAACGAAACATTTGT
TAAAAATGATATTACCGAGATTTCTACATCGAAGTGTTTCCACCCCAAAA
ATGAAGgcGAACATAGTTCTACTACGTGGTCCTAAAAATTTGAAGCTTGA
TCAATACGACACGATGGAGAGACAGGAGAAACTAATGAAAGTATCGACTG
TCTATAGCTTGATGAACAAGTACAGATTCTACAATGGTCTGCTGATTGAG
CTGTTTGGAGCAACACCGAGCCGATATGATACTAACTCCAAATTCCCTTC
GTATATCTATCCAGAATCACAAGTTCAAGTTATCATAAAGTATTCCAAAA
TAATGAAAGTTCAAATACTTTTCCACAGACAAAACGACACAAAATGCATG
TCAACAAAGGATGAATCTTGGTCAAGCCTACGAAACACTTTGTCAAAAAT
GAAGAAGTCctcatcaaaaacaaaacatgaagAACATTCAATATCACATT
TAATACACCCATATTGTGACCATGACCAATATCTTTTACACTCAATCGAG
GTCGAATTTGACAGCTCAAGATTAATGGGTGTTTATAATATGGTTGTGGA
ATATTTGAATGGCGGAAAGCTTAATGTTGATCACTTTAGTGGagcaaata
tttctttatattcAGTTATGTTTTTTATGTTCAAAGGAACTTAAATGGCA
TTTAAAAGTCAGGGCGttagttcaaaatttccttttgcaaaagttttaaT
CAATACGCAAGGTAGCAAGCAAGCAGGAGGAAGAATGCTGAAAAAGgttg
tatgGTTATTTACTTTTGTGATATCTCTACTGGTGGTCAGAGCATATTCC
ACCAAAGggaaaattgattttgacattAGCGAGCAAAACGAAAAAGACTT
CAAATCTTTTTGGCTCTTTTTGATTCAACACTCACAACCATTCAACCAAA
GCTGTTTGGACTTGATCAATAATGAAGAAAGAAACCATTTGAAATCTATT
ACAACAATCGTAAGAAAGAGCCAAGAATGCCACCAAATCAACAAACCTAC
TTCAAATGGAAACCAGGTTTATTATGGCCAGTTAAATGGTACCTTCCAAG
TACTGAGAAATATCCGAATTAAAAAACCAACCATATTTTTAAAACACGAA
AAAAACAAATCGCCAACCCTGGTGTTCGGTGTCATAGATTTCCCTGGAAT
CTCACTTAAACTAATTGAAGAGAACAATGTAGTAATCAAAATCAATAATG
ATGATGAAATTACAATAAAGACTTTTGGTAAAATCAATTTCAAACCATCT
TGGGTTGACACTAATCTAGTGAATATACAGAGATTCAAAAGTCGAAAAAT
CCAGTATATCTCACGCTACAATATCAATTATTTCACCAATTTAGAAGTCA
GTCAGGATACAAGATTATTGGGTACTGAAAATAGCATTATTATGCAAGAT
GGAAATTCAACATTCAAAACACTTTATCCTAACATGGAGAAATCAGAAAT
TGAACATTACCACGATGTAGAATCTGAAATGTTGATTCTTGGACATGATT
TTCTTGGAGTTTATCTAAGTTTAGAGATGGTTGAAACGAAACATTTGTTA
AAAATGATATTACCGAGATTTCTACATCGAAGTGTTTCCACCCCAAAAAT
GAAGgcGAACATAGTTCTACTACGTGGTCCTAAAAATTTGAAGCTTGATC
AATACGACACGATGGAGAGACAGGAGAAACTAATGAAAGTATCGACTGTC
TATAGCTTGATGAACAAGTACAGATTCTACAATGGTCTGCTGATTGAGCT
GTTTGGAGCAACACCGAGCCGATATGATACTAACTCCAAATTCCCTTCGT
ATATCTATCCAGAATCACAAGTTCAAGTTATCATAAAGTATTCCAAAATA
ATGAAAGTTCAAATACTTTTCCACAGACAAAACGACACAAAATGCATGTC
AACAAAGGATGAATCTTGGTCAAGCCTACGAAACACTTTGTCAAAAATGA
AGAAGTCctcatcaaaaacaaaacatgaagAACATTCAATATCACATTTA
ATACACCCATATTGTGACCATGACCAATATCTTTTACACTCAATCGAGGT
CGAATTTGACAGCTCAAGATTAATGGGTGTTTATAATATGGTTGTGGAAT
ATTTGAATGGCGGAAAGCTTAATGTTGATCACTTTAGTGGagcaaatatt
tctttatattcAGTTATGTTTTTTATGTTCAAAGGAACTTAAATGGCATT
TAAAAGTCAGGGCGttagttcaaaatttccttttgcaaaagttttaaTCA
ATACGCAAGGTAGCAAGCAAGCAGGAGGAAGAATGCTGAAAAAGgttgta
tgGTTATTTACTTTTGTGATATCTCTACTGGTGGTCAGAGCATATTCCAC
CAAAGggaaaattgattttgacattAGCGAGCAAAACGAAAAAGACTTCA
AATCTTTTTGGCTCTTTTTGATTCAACACTCACAACCATTCAACCAAAGC
TGTTTGGACTTGATCAATAATGAAGAAAGAAACCATTTGAAATCTATTAC
AACAATCGTAAGAAAGAGCCAAGAATGCCACCAAATCAACAAACCTACTT
CAAATGGAAACCAGGTTTATTATGGCCAGTTAAATGGTACCTTCCAAGTA
CTGAGAAATATCCGAATTAAAAAACCAACCATATTTTTAAAACACGAAAA
AAACAAATCGCCAACCCTGGTGTTCGGTGTCATAGATTTCCCTGGAATCT
CACTTAAACTAATTGAAGAGAACAATGTAGTAATCAAAATCAATAATGAT
GATGAAATTACAATAAAGACTTTTGGTAAAATCAATTTCAAACCATCTTG
GGTTGACACTAATCTAGTGAATATACAGAGATTCAAAAGTCGAAAAATCC
AGTATATCTCACGCTACAATATCAATTATTTCACCAATTTAGAAGTCAGT
CAGGATACAAGATTATTGGGTACTGAAAATAGCATTATTATGCAAGATGG
AAATTCAACATTCAAAACACTTTATCCTAACATGGAGAAATCAGAAATTG
AACATTACCACGATGTAGAATCTGAAATGTTGATTCTTGGACATGATTTT
CTTGGAGTTTATCTAAGTTTAGAGATGGTTGAAACGAAACATTTGTTAAA
AATGATATTACCGAGATTTCTACATCGAAGTGTTTCCACCCCAAAAATGA
AGgcGAACATAGTTCTACTACGTGGTCCTAAAAATTTGAAGCTTGATCAA
TACGACACGATGGAGAGACAGGAGAAACTAATGAAAGTATCGACTGTCTA
TAGCTTGATGAACAAGTACAGATTCTACAATGGTCTGCTGATTGAGCTGT
TTGGAGCAACACCGAGCCGATATGATACTAACTCCAAATTCCCTTCGTAT
ATCTATCCAGAATCACAAGTTCAAGTTATCATAAAGTATTCCAAAATAAT
GAAAGTTCAAATACTTTTCCACAGACAAAACGACACAAAATGCATGTCAA
CAAAGGATGAATCTTGGTCAAGCCTACGAAACACTTTGTCAAAAATGAAG
AAGTCctcatcaaaaacaaaacatgaagAACATTCAATATCACATTTAAT
ACACCCATATTGTGACCATGACCAATATCTTTTACACTCAATCGAGGTCG
AATTTGACAGCTCAAGATTAATGGGTGTTTATAATATGGTTGTGGAATAT
TTGAATGGCGGAAAGCTTAATGTTGATCACTTTAGTGGagcaaatatttc
tttatattcAGTTATGTTTTTTATGTTCAAAGGAACTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012947XLOC_012947Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023042-exon-sc0000439-1491911889:190010..190198TCONS_00023042-exon-sc0000439-1491911889:190010..190198Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1510915933:190010..190198TCONS_00023042-exon-sc0000439-1510915933:190010..190198Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1575043694:190010..190198TCONS_00023042-exon-sc0000439-1575043694:190010..190198Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1491911889:195689..195749TCONS_00023042-exon-sc0000439-1491911889:195689..195749Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1510915933:195689..195749TCONS_00023042-exon-sc0000439-1510915933:195689..195749Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1575043694:195689..195749TCONS_00023042-exon-sc0000439-1575043694:195689..195749Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1491911889:196947..197743TCONS_00023042-exon-sc0000439-1491911889:196947..197743Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1510915933:196947..197743TCONS_00023042-exon-sc0000439-1510915933:196947..197743Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1575043694:196947..197743TCONS_00023042-exon-sc0000439-1575043694:196947..197743Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1491911889:198633..198935TCONS_00023042-exon-sc0000439-1491911889:198633..198935Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1510915933:198633..198935TCONS_00023042-exon-sc0000439-1510915933:198633..198935Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1575043694:198633..198935TCONS_00023042-exon-sc0000439-1575043694:198633..198935Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1491911889:199404..200634TCONS_00023042-exon-sc0000439-1491911889:199404..200634Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1510915933:199404..200634TCONS_00023042-exon-sc0000439-1510915933:199404..200634Clytia hemisphaericaexon
TCONS_00023042-exon-sc0000439-1575043694:199404..200634TCONS_00023042-exon-sc0000439-1575043694:199404..200634Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023042-proteinTCONS_00023042-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000439supercontigsc0000439:190010..200634 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0889992 0.200048 0.140745 0.0476531 0.150624 0.891246 1.37343 2.59497 1.34695 2.91545 1.97508 1.1403 1.01501 0.0200652 0.064599 7.25067 8.97618 0 0 0.907746 0.643756 0 0.0368349 0 0.0677195 0.0484532 0 0.0392206 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023042 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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