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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023002 ID=TCONS_00023002|Name=TCONS_00023002|organism=Clytia hemisphaerica|type=transcript|length=1058bp
ACCAAAGATTCCTTGTATGTTACCAAAAACCTTTCTGTTCCCATTCAATA
CCACTATCCCTCAGACGAACCTAATGACTTGATTCTTTGGGAAACAAAGC
ATACCTTAGCTCATGATTTTATAGATATAAAGCCCATTTCTGCACAAGTC
ACAATACAAAAACTCGAAAATTACATTCACATTCCCTCGTTAGAGATTGG
AGGAGAAATCTCCTTTAATCATCCTCTATCAGATAAAAATGGTCAGTGGT
ATACTCTTGACAACGGAATTTTAGTGGAGGGTAATGGTTCCAGATTTGAT
TACAGGCGTGCATCCTTTAAGAAAATCGTTTTCCTagccaaaaaattttc
gaaagaacAAGGTCTACCTTTGGTACAGGCCCACTTAATAGAAAATCTCA
TTAACATAAAAGAACAAACCCTGCGTGAGGCCAAACGTACCTGTTTTGTA
CAGAAAGAAATAAGATCTATCCACAAATGGTTATCTTCTCATTTCCCTGA
CATGGTGGCTGAGTTGGTTTTTGGAAGAACAGATATTGTCGCACACCCTG
CCGGAGATGCATTTGAGATTAGCGAGTGTCGCCATGTCCACTACCAGTGC
TTAGTCCTTGACCGCAGAGCCAATGATCCCTTTGTTAATGGTACTTGTTA
TCAGTACTTTCCCCTTGAGTCTCCAAAGTCTGCGCCTGTGCAGTTTGTTC
ATTTGCCCTCCCGGCGGGTTTACTTTCATTCTCCCAGAATTGGTTGTCAA
AAACTCCCCCAGCAAGTGGTTATCAACTCGGACCAGGGTCCCATCGCAGT
AAGCCCGGAAGGAAATTTTGAGCATATAAATCTAACAAAAGTCAATTACT
CTCCTAAATTGTGGATGACCCCGTTGAAACACACTTACGGTTTTTCGTCG
AAACTCTTTGTGAAGCTTCCAAAACGCAGTGAGCCTTATCCGTTGTTAGG
AATGATGGCTGAGTTCCATAAAAGTATGAGGCAGCTGCAAGAGCAAGTTG
ACCAGCTTTCTTCGGGATCACCCACAAACGTATTTGCAGCTGTGGCAGCC
GATCTGGG Run BLAST on NCBI protein sequence of TCONS_00023002-protein >TCONS_00023002-protein ID=TCONS_00023002-protein|Name=TCONS_00023002-protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
TKDSLYVTKNLSVPIQYHYPSDEPNDLILWETKHTLAHDFIDIKPISAQV
TIQKLENYIHIPSLEIGGEISFNHPLSDKNGQWYTLDNGILVEGNGSRFD
YRRASFKKIVFLAKKFSKEQGLPLVQAHLIENLINIKEQTLREAKRTCFV
QKEIRSIHKWLSSHFPDMVAELVFGRTDIVAHPAGDAFEISECRHVHYQC
LVLDRRANDPFVNGTCYQYFPLESPKSAPVQFVHLPSRRVYFHSPRIGCQ
KLPQQVVINSDQGPIAVSPEGNFEHINLTKVNYSPKLWMTPLKHTYGFSS
KLFVKLPKRSEPYPLLGMMAEFHKSMRQLQEQVDQLSSGSPTNVFAAVAA
DL Run BLAST on NCBI transcript from alignment at sc0000438:68392..69449 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023002 ID=TCONS_00023002|Name=TCONS_00023002|organism=Clytia hemisphaerica|type=transcript|length=1058bp|location=Sequence derived from alignment at sc0000438:68392..69449 (Clytia hemisphaerica)
CCCAGATCGGCTGCCACAGCTGCAAATACGTTTGTGGGTGATCCCGAAGA
AAGCTGGTCAACTTGCTCTTGCAGCTGCCTCATACTTTTATGGAACTCAG
CCATCATTCCTAACAACGGATAAGGCTCACTGCGTTTTGGAAGCTTCACA
AAGAGTTTCGACGAAAAACCGTAAGTGTGTTTCAACGGGGTCATCCACAA
TTTAGGAGAGTAATTGACTTTTGTTAGATTTATATGCTCAAAATTTCCTT
CCGGGCTTACTGCGATGGGACCCTGGTCCGAGTTGATAACCACTTGCTGG
GGGAGTTTTTGACAACCAATTCTGGGAGAATGAAAGTAAACCCGCCGGGA
GGGCAAATGAACAAACTGCACAGGCGCAGACTTTGGAGACTCAAGGGGAA
AGTACTGATAACAAGTACCATTAACAAAGGGATCATTGGCTCTGCGGTCA
AGGACTAAGCACTGGTAGTGGACATGGCGACACTCGCTAATCTCAAATGC
ATCTCCGGCAGGGTGTGCGACAATATCTGTTCTTCCAAAAACCAACTCAG
CCACCATGTCAGGGAAATGAGAAGATAACCATTTGTGGATAGATCTTATT
TCTTTCTGTACAAAACAGGTACGTTTGGCCTCACGCAGGGTTTGTTCTTT
TATGTTAATGAGATTTTCTATTAAGTGGGCCTGTACCAAAGGTAGACCTT
gttctttcgaaaattttttggctAGGAAAACGATTTTCTTAAAGGATGCA
CGCCTGTAATCAAATCTGGAACCATTACCCTCCACTAAAATTCCGTTGTC
AAGAGTATACCACTGACCATTTTTATCTGATAGAGGATGATTAAAGGAGA
TTTCTCCTCCAATCTCTAACGAGGGAATGTGAATGTAATTTTCGAGTTTT
TGTATTGTGACTTGTGCAGAAATGGGCTTTATATCTATAAAATCATGAGC
TAAGGTATGCTTTGTTTCCCAAAGAATCAAGTCATTAGGTTCGTCTGAGG
GATAGTGGTATTGAATGGGAACAGAAAGGTTTTTGGTAACATACAAGGAA
TCTTTGGT Coding sequence (CDS) from alignment at sc0000438:68392..69449 >TCONS_00023002 ID=TCONS_00023002|Name=TCONS_00023002|organism=Clytia hemisphaerica|type=CDS|length=1056bp|location=Sequence derived from alignment at sc0000438:68392..69449 (Clytia hemisphaerica)
CAGATCGGCTGCCACAGCTGCAAATACGTTTGTGGGTGATCCCGAAGAAA
GCTGGTCAACTTGCTCTTGCAGCTGCCTCATACTTTTATGGAACTCAGCC
ATCATTCCTAACAACGGATAAGGCTCACTGCGTTTTGGAAGCTTCACAAA
GAGTTTCGACGAAAAACCGTAAGTGTGTTTCAACGGGGTCATCCACAATT
TAGGAGAGTAATTGACTTTTGTTAGATTTATATGCTCAAAATTTCCTTCC
GGGCTTACTGCGATGGGACCCTGGTCCGAGTTGATAACCACTTGCTGGGG
GAGTTTTTGACAACCAATTCTGGGAGAATGAAAGTAAACCCGCCGGGAGG
GCAAATGAACAAACTGCACAGGCGCAGACTTTGGAGACTCAAGGGGAAAG
TACTGATAACAAGTACCATTAACAAAGGGATCATTGGCTCTGCGGTCAAG
GACTAAGCACTGGTAGTGGACATGGCGACACTCGCTAATCTCAAATGCAT
CTCCGGCAGGGTGTGCGACAATATCTGTTCTTCCAAAAACCAACTCAGCC
ACCATGTCAGGGAAATGAGAAGATAACCATTTGTGGATAGATCTTATTTC
TTTCTGTACAAAACAGGTACGTTTGGCCTCACGCAGGGTTTGTTCTTTTA
TGTTAATGAGATTTTCTATTAAGTGGGCCTGTACCAAAGGTAGACCTTgt
tctttcgaaaattttttggctAGGAAAACGATTTTCTTAAAGGATGCACG
CCTGTAATCAAATCTGGAACCATTACCCTCCACTAAAATTCCGTTGTCAA
GAGTATACCACTGACCATTTTTATCTGATAGAGGATGATTAAAGGAGATT
TCTCCTCCAATCTCTAACGAGGGAATGTGAATGTAATTTTCGAGTTTTTG
TATTGTGACTTGTGCAGAAATGGGCTTTATATCTATAAAATCATGAGCTA
AGGTATGCTTTGTTTCCCAAAGAATCAAGTCATTAGGTTCGTCTGAGGGA
TAGTGGTATTGAATGGGAACAGAAAGGTTTTTGGTAACATACAAGGAATC
TTTGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023002-exon-sc0000438-1491911889:68392..69449 | TCONS_00023002-exon-sc0000438-1491911889:68392..69449 | Clytia hemisphaerica | exon |
| TCONS_00023002-exon-sc0000438-1510915933:68392..69449 | TCONS_00023002-exon-sc0000438-1510915933:68392..69449 | Clytia hemisphaerica | exon |
| TCONS_00023002-exon-sc0000438-1575043694:68392..69449 | TCONS_00023002-exon-sc0000438-1575043694:68392..69449 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000438 | supercontig | sc0000438:68392..69449 . |
Blast
The following BLAST results are available for this feature:
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