TCONS_00022975 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022975
Unique NameTCONS_00022975
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length816

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022975 ID=TCONS_00022975|Name=TCONS_00022975|organism=Clytia hemisphaerica|type=transcript|length=816bp
CGAGAAAATAAGTTTAATTACCAACGTTTAAACTTAAATCTTCCCATCAA
CCGACCATCCAAGAAATCTGTTGACAAATCACTTTCAATTGTGAAAAGCA
GTTTGGTGGGCCTTGCGAAACATCAATTTGAACTGGTTGTAACTTCATTA
GTACATTACATTAAAGATATTCCAACAATTAATTTGTTACCCATAGAACA
ACAACCACTTGCAATCCAATCAAACTTGATTGTGGTTACGACAATTGAGC
ATTGCTTTGAAAAGCATTCTGAAGAAAGCTCATCATTATCGGATGAAACA
GTGAAAAGACAACTCTTGAATACTCTGTGCAGCCTGATAATTCATCCAGA
TGCATTCAACGAAGCTAACCAGAAAGTTGGCAGACATGTTGGAAATATCA
TCTATTTTATCAGTAAACATCACTTCTCATCAGTGTTCAGTAGGATTGTT
GAGAGGTTGTACTCTTTGGTAGAAAACAATGAGGACAGTACTATTGCAGA
TAATTTGGAATTGATACGATACTTACATGTTCCTATAGAAGGACTTAAAT
GCTTGTTTGAAGaatgcggaaaacattttaaatttctaaagaaATATTCT
CAACAAGTTGTCCTGAAAGGCTTATGCAAGTCCATATGGAATTGGATTGA
AACCTACCCTGAACAGTTTTGCAAcatttataaaaatccaaatacCCAAC
TATCAGaacTTAGTGAAAAGCTTTTTCAACTGGTGGAAAATTGGTCCGAA
AACTCGAAAAAAAGATCAATATCATGGCCACTGCAAGGATTGCTTCTCCT
TCTCTCACCTGTATGT
Run BLAST on NCBI

transcript from alignment at sc0000437:103331..115940-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022975 ID=TCONS_00022975|Name=TCONS_00022975|organism=Clytia hemisphaerica|type=transcript|length=12610bp|location=Sequence derived from alignment at sc0000437:103331..115940- (Clytia hemisphaerica)
CGAGAAAATAAGTTTAATTACCAACGTTTAAACTTAAATGTAAATTACTT ACTTACTTCGTGATACTTCGTTTTTGATTTTGCACTTTATGGTACCGTCA ACTGCTCCAACTTCGGACTATCGCAGGCGTAGTTAATCGATATAATTGAT AATCTTGAGTTAGTAATAGATAAATAATCGATAAATAATCGATGGATTAG ATATATCTATTAACCAATAGAATCGATAGGTAATCAGACCTTAAAAAAAT CTTGAGTATCGATCAGCGATCGATTATTTCCAAGCTATCGATTACTTATC GATCACATATCGACTACATACAACCTATCGTACTTATCAATAGACCTTTT CGCCTTTCCATCCGCCATAGGGCCAAATTGAAAAGTCCCGTTCCTGTCAC GGAAGGAAATCAGAGCCTTTTTTGGTCTTTTTTTGAAAAATGGTAAAATG AATGAAAATAGTATTAGTCCTGAATTNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNAAAGGCTCTAATTAGCATATTTCCATGGT GCTGAAGCGATTTAGAGGATTTAGAACCAGCTAGGAACAGTAGTTTTGCC AGAAAACCGGTTTTTAGGCCTCATGAGCCGCCTGGGCTTTACGCTGTAAG CTTACAGCGCTGTACTGGAGCCTTAGATTTAAGCTTATTCTGAGCTCCAT ACAAGGCTGAGCTGGTTCCCAATGGTCATAAACCTTGAAGGACACTCCCC TGCAATGGACTAGACCCATTTAAGTCCAGCGAAGGGGGCAGAACCGACAA ATTTTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTG TTATGACAGAAAGTATGATTGATAAACTTGGTGGAGTTATCAAAACAAAT TTGTTGTCAAAGAGATTTAACAGTAAGTGAAAATACAGACCAGAAATCAA CAAGTCCCATGTTGCGTACACTCGTCCCAAGTTGGAGCAGTTGACGGTAC TCATCCAATTCGTGGAATCCAATGATTGACCATTACTGATATACTGTTGG AATCAGCTCTCCTGAAGTTGAAATAATTAGGAAGCAGTGGTTTGTCTGGC AGTGTATTCAGGAATTGTTCAAGATGTTGTTTAAAAGTTTGTTTGGTACA TTTTGTAAGGTTTCGAAGGGATTTTGGCAGAGCGTTAAAAAGTCTTGGTC CTTCCTGTGAGAGACAATCTCTATTTTTATGTTTGACATTAACAGCTTTT GAATTACATTTTCTACCCAGTCTCTGGTTTGTGCACGCCGCCTGCATCAT CGCTGTAATTGAAGTTTGGAGTGATATCTTCTAGTATGCACCATGTGTAG ATTATTCTGTACCTTTCTCTTCTTCTTTCAAGACTGTATATTTTCAGTTG ACTCAATTTTTCCCAATAATTCAACTGGTTCAACGAAAAATGCCGTTCAA AAATGATTTTTGCAGTAGCTCCAATTGTTGGATGAGGCATCGCTTTGACG AAGACCATAGTTGGGAGCAATAGTCAAGATGTGGAATAGCAAGTGACTTC CAAAGGGTTAGCATTACATCAGTGTTCCATGTCTTGAAGGTTCGGAATAT CCATGAGCTGATGGCTTTGACTTTGCTGATTTGATTTTGGATGTGTTGAC TGTAGCTCATATCTACATCCAAAGTGAACTCCAAGGTCTTTGACTTGGTT TTTGGTTTCAATTTGGTCCTGGGTATCAGAATAATAAACTGAATTTGGTT TCAGCTCTTCATTTTTCCCATAACACATTATGTTCGAATTTCAGTCCATT GAGTTGCATGTTATTGATCTCTGACCATTTGTATACCCTATTGAGGTCAC TTTGAAGAAGCTGAACATCATCTTGACTGGACACTTCTTTCAGCAGTCGT GTATCGTCCGCAAATGAGGACAGCACTGTATGATAAATATCTTCATCAAT ATCCTAAATCATCACAAGAAACAGGAGGGACACAGTACGGAGCCTTGGGG CACCCCAGATAAAACATCTGCACTTTTGGAAAGCCTTGCGTTGACTGAGA CTCTGTGTTCTCTTTGTTAGGAACGATTTAATCCAACAGAGAAGTTTTCC ACAAATGCCATTTCTTTCAAGTTTATGCAGAAGTATTGAGTGGTCAACCC GATCGAATGCTGCTTTACTGAAGTCAAGGTAGATAACATCTACGCTGTCG CCAATTTCGATATGATGAATCAATCGTTCAATGTGGGCAAGCAAGTAATT GGCTAAGGCAGGATCTTTCTGACCTAAATCCGTGTTGGTTAGTATTATAT AGGTTGTTTCTTTCCAGGTGGTCTTGCATGTTTTTTCTTACAATCTTTTC AAAAACTTTGGTTACATGTGATGTAAGAGCAACAGGGCGGTAGTTTTCTG GTAATTCTTGATTTCCTTTTTTAAATATTGGGGTGGATGTAACTTGTTTT AAGTATCTTTGGGGTGAATCCTTTATCATGGATATTCTGACATATCAGCT TGAGTGGTTTTGCAAGCTGTGACTTGCTTTTAAGGAGAAACATAGCTGGA AAGCCATCTGGACCAGCAGCTGAGTTAGGAGAGAGGGTTTGTATTTCTCT AATGAAATCTTCCTCTGTGAAGTCAACATAATCAAGTTTCTCGGTCACTT GTGAAGGGCTGAGATTGGGGTTGTCATATTGGGGTTTTGGTGGTGTGAAT ACAGATGTATATTGGTCTTGAAGTATATTGGCCATCTGAAGATTGTTGTC TGCTAGCTTATTTGTAGTAGGATCCAATAACGGTCCAACTTTAGGTTTGG TTTGAGAAAATCTTTTTGCATAAGAGTAGAAGAACTTGGGGTTCACTTTG ATTTTTGAGATTGCATCTAGCTCTTGATTGTGCCTTTCGTTTGTATAACT GGTTTGTAATTTTAGCTCAATCAAACAATATCTATCAGTTTTGACTTTGT GTCCTTGTTGGGCTTTCTTTTCTTCAGTTTCTTTCTTTTTCGCATAAGAA TACGACGATCGCGTGGAACAATCTTTTTCTTTAATGGCTTTCGAAGTGGA ATGCTGTTTGTGGTGATAACGCCAATGCATTTCTTGATGAATACATTATA TTGCTCATCAGGGTTAGAGTCAGAAGTTTTAAAATACTGCCCCAATCAAT ATCATCCAAAGTTTTATTGATTTTTCCCAGTCTATTTTTTCACTGTAAAA GTTGAATTTGTCAAAATCATTGTTAATTTTTTTTCTCTGAATCAGTAGTT GATGTCGTCTTGTTAAAGGATAAGTGTCTAACAACCTCAATGTTGAAGTG ATCTGAATATATAGTAGGTGATGCATTTGCACATGGTCTCGTGTAATTTT TGTTTTGTAAAGTTTGATTTCTCACGCATTTTGAATTTTTGAGAAAATTT TTCCTGTTTTTCCAATTTTTGGAAAAAAGTTTTCCCAATTTCCCGATTTC CTGATTTTCCGAAAAAAAAGTTTTCCCGATTTCCCAATTTCCCAATTTTT GGAAAAATGTTTACCTGATTTTCCGATTTTCGGAAAAAAGTTTCTTTATT TTACGGATTTTTCTAGGTAGTGCCCGGTAGTAAATGGGGGGTATGGGGTG GTTTTGGTTTTTTTCCAGGTACTACCCAGTAGTAAATAAGGGGTATGGGG TGGTTTTGGGATTTTTCCATGTAGTATGGTGTACTTCAGGGGTGGGTGGG TGTCAAGTTTTGAAAAATACCTTGTAGTACACATACATGCCGCCTTCTAG TACACTGACCCCCCCTGTTCAGAAGGTGCTCAAAAACATAAAATTATGTT AAAATCAGTCAGTCCAATGGTTTTCTTTTTACAGTCATGATGCCAATGAC ATCAATTTGAAATTGTTTTTTCAAGTAAAGAGGCATCAATGCTGAAGTTT ATAGTTTTGTATTACATTAATCAAAATATTAAGGGAAATTGCAAAAAAAA TTTCCAGCTGCCTGTTTGAGATTTCTTTTTGTCAGAAAAAGGTAAAAAAA CAAACTACTTTCTCCTAGTCTAACCAGTTAGATCCATAATAATATCTCTT TTTTTTCTTTTTTTCTGTGATTGAAGAGCAAAGAGAGCAGTTTTAATAAT CGCTTTTTTATTTATATGATTCAGCTTCCCATCAACCGACCATCCAAGAA ATCTGTTGACAAATCACTTTCAATTGTGAAAAGCAGTTTGGTGGGCCTTG CGAAACATCAATTTGAACTGGTTGTAACTTCATTAGTACATTACATTAAA GATATTCCAACAATTGTAAGTTTACATAATCCTGTATGAAATCAAATTGG AAATCTAAACCTTGCTTGAATTACAATGGAATAAAAATATTAAAAGTTTA AATTAGGGTATTGTATTCATGATATTATAGCTATGCATCGGTTTTGTATT TTGAAGTTTATTCTCTAACTTCAATATCTACTACCAGGCCATTTTTTATG CCCTTTTAGCGTCCGATGACCGGACGCTGCCCCTCCTGAAATCACTAAAA TTTTGGTAAAAACAGCCTTTTTAGCGGAAAAACACAAGAAAAAGTGCCCT TTGTGCCACCAATGGACGCTGCCCTGCCTTTCTAAAATATGGCCTGACTA CTTCTTGTTTCCCAACTGGAAAAAGTTTTGTATCAGTACAACATTTCTAA CCATACCCTTTGGTGTATCATAATAAGCAAGTACATTAATTCTTACTTCC TTTTGTTTTAGAATTTGTTACCCATAGAACAACAACCACTTGCAATCCAA TCAAACTTGATTGTGGTTACGACAATTGAGCATTGCTTTGAAAAGGTAAG ATAGCCAGATTATCCATATCTTAAAATAGCCTAAAATGAGGCCAAGCCTA TATCTATGAGTCTTCGAAATGATCTTTTGAAAGATTTTTTTTGCAAACTG AAGATGTCCACAATTTTTTCTTAATTTTTTGTATTCTTCTTTACTCAACA AATATTCTTTTTATGTAGCATTCTGAAGAAAGCTCATCATTATCGGATGA AACAGTGAAAAGACAACTCTTGAATACTCTGTGCAGCGTAAGTAATAACA ATTTTATATTCAAATGGTTAAAAAATTATTCTGTTATTACTTTTATAATT GAATATCACTACTACAAATTGAAATAACTTCTTCAAAGAAATCATTGTAT TTGAAGTAATTTTTTGGTTAAAAACTTTTCAGCATGGAATTTTGCTTTTT TTGACGTATTTCCGGGGGACTTATATACCAAATTAAATCTATTCATCAAG CTTTATCAGATTGTATAATCAGTTTCTCTAATACTTATTTTAATGTCCTT GCTCTATACTATATTTTTCAGCTTTGCCAGCTTGGAAAAAACAGGTTTTG AAGTCTCAAGGGACCAATTAATGAAAAATTAAAATGGAAACCCATCTATA CTACTTTTTAGAATTTAGAAAATATTTCATTCGGCTGATGATTCTTGTTC ATACCGATGGCATGAGACTAAGTAGTCAAAATTTTACAAGTCTCACACTT AATGTTTTCAACATAATGGTTCAAAATCATTTTAATCTTGTTTATTATTT TAGCTGATAATTCATCCAGATGCATTCAACGAAGCTAACCAGAAAGTTGG CAGACATGTTGGAAATATCATCTATTTTATCAGTAAACATCACTTCTCAT CAGTGTTCAGTAGGATTGTTGAGAGGTAAGTGTTTTTTTTATCTCTTCAA CTATCCCTAATCCTTTTTCATTCAATATAACAGGCATGACAAAAAAATTT TAATTTTGGCACAAAAATTTAGGTAATTTTACTGACGAAAAGAGAAATTT GATTGCTTTTTAAAAATCTGATACAATGATATGCCTTTAAAATTAATGGA CAATCTTGGTTTTCTATAAAGGAACGGCCTTTTTCAATTTGCTGTGATTG TGAAATGCTTGCAGGGACACATATCATTGATTTTGATCATTTCTGAGGGA AGCCTTGACACAAAATATGATTTTTATGCTACAGCAAGAGCCTGGAATCA AGGGGTGTCACAACATTTGAAAAAGTTGCAATGTGGAATAGACTTTATTA TTATTACTATGTTATTATTTTGAATTTATTTTTTCAATTCCAGGTTGTAC TCTTTGGTAGAAAACAATGAGGACAGTACTATTGCAGATAATTTGGAATT GATACGATACTTACATGTTCCTATAGAAGGACTTAAATGCTTGTTTGAAG GTAACTCTTCTTGTTTCTATTCTCTTTTGTAGCTCATAGTGGAGATTTTA TTAAAATACAAAAAATCGTTTGAGATTAAACCTATTACTTTAATAATTGA TTACATATCTTGACCTTACTGAAATTTTGATATTAATTAGGCTGAGAATA GACCCAGTCTGACTTAAAATGAATGAATTGAAAGTAAAAATTCTATTTTA TTTGAGCTCGCTCTTTGCCCAAAGGGTTTTTCTGGTCCTGTTTAATGTAT CACTGATAGATTTTTCTTTTAAAAGAATGATAGTTGGATCTGTTTTTTTC ATTATAAACATTTTTTTCCTTTAAGAATGCGGAAAACATTTTAAATTTCT AAAGAAATATTCTCAACAAGTTGTCCTGAAAGGCTTATGCAAGTCCATAT GGAATTGGATTGAAACCTACCCTGAACAGTTTTGCAACATTTATAAAAAT CCAAATACCCAACTATCAGGTAACTAACTAACTTATTTGTGCTAAGGCCT GAGTGCCGTGAGGAATTTAATCTTTAGTGTATGGTTTGTTTGCACTACAG AAAACAAATTATTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNAATATGATTAAACGATTGACTTTTTATTTT AATGTTTTTTGTTTTCATAATGACCCATAAAGTCTGTCAAAATGGAAAAA TGAGCTAAAATTGCTTGATACACGGCAAATTTTCGTTCTGTTTACTTGAT ATTTTTCGTGCAAATTTACATGGGATCAAAGCTAAAGCTAAGCAAAAATT TAATTCGAAACCCGTGTATTGATATTACAAAGTTAGATTTGTTTTGTTAG ACAGGAGTCATTTATAAATCNAATTGATATTACAAAGTTAGATTTGTTTA GTTAGACAGGAGTCGTTTATAAATTATAATCTGTGTACCTTATTAGAACG AATTGCACTTTTTTGCAGTTTACCCTTTTTGGACAAATTTCTTTCATTTT CCTAGGGATTTTTTCAGATTTTTTCAGATTTTTTCGATAAAATTGGAATT CTCTGAATGAGTCGTCTAGCATGCTAGATTATATTTAGTTGACAAAAAGA AAATGCTTAGCCAACTCAAAAATAATAGTCCTATTTCTTTTCAAATTTAG AACTTAGTGAAAAGCTTTTTCAACTGGTGGAAAATTGGTCCGAAAACTCG AAAAAAAGATCAATATCATGGCCACTGCAAGGATTGCTTCTCCTTCTCTC ACCTGTATGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012908XLOC_012908Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022975-exon-sc0000437-1575043694:115902..115940TCONS_00022975-exon-sc0000437-1575043694:115902..115940Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1575043694:106926..107066TCONS_00022975-exon-sc0000437-1575043694:106926..107066Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1575043694:106396..106479TCONS_00022975-exon-sc0000437-1575043694:106396..106479Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1575043694:106154..106222TCONS_00022975-exon-sc0000437-1575043694:106154..106222Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1575043694:105516..105637TCONS_00022975-exon-sc0000437-1575043694:105516..105637Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1575043694:104991..105097TCONS_00022975-exon-sc0000437-1575043694:104991..105097Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1575043694:104522..104665TCONS_00022975-exon-sc0000437-1575043694:104522..104665Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1575043694:103331..103440TCONS_00022975-exon-sc0000437-1575043694:103331..103440Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1510915933:115902..115940TCONS_00022975-exon-sc0000437-1510915933:115902..115940Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1510915933:106926..107066TCONS_00022975-exon-sc0000437-1510915933:106926..107066Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1510915933:106396..106479TCONS_00022975-exon-sc0000437-1510915933:106396..106479Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1510915933:106154..106222TCONS_00022975-exon-sc0000437-1510915933:106154..106222Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1510915933:105516..105637TCONS_00022975-exon-sc0000437-1510915933:105516..105637Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1510915933:104991..105097TCONS_00022975-exon-sc0000437-1510915933:104991..105097Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1510915933:104522..104665TCONS_00022975-exon-sc0000437-1510915933:104522..104665Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1510915933:103331..103440TCONS_00022975-exon-sc0000437-1510915933:103331..103440Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1491911889:115902..115940TCONS_00022975-exon-sc0000437-1491911889:115902..115940Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1491911889:106926..107066TCONS_00022975-exon-sc0000437-1491911889:106926..107066Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1491911889:106396..106479TCONS_00022975-exon-sc0000437-1491911889:106396..106479Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1491911889:106154..106222TCONS_00022975-exon-sc0000437-1491911889:106154..106222Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1491911889:105516..105637TCONS_00022975-exon-sc0000437-1491911889:105516..105637Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1491911889:104991..105097TCONS_00022975-exon-sc0000437-1491911889:104991..105097Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1491911889:104522..104665TCONS_00022975-exon-sc0000437-1491911889:104522..104665Clytia hemisphaericaexon
TCONS_00022975-exon-sc0000437-1491911889:103331..103440TCONS_00022975-exon-sc0000437-1491911889:103331..103440Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000437supercontigsc0000437:103331..115940 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.227059 0.295225 0.72033 0.198416 9.60917 2.73195 5.23135 8.16696 4.39262 4.28235 3.58486 3.23175 2.97576 3.00758 2.01444 4.04666 2.18495 5.29987 3.53118 1.88728 7.26462 6.86456 1.96753 4.08755 4.43464 4.53234 6.02632 2.64519 3.01574 2.81924
Blast
BLAST of TCONS_00022975 vs. Swiss-Prot (Human)
Match: NF1 (Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 4.651e-38
Identity = 78/255 (30.59%), Postives = 144/255 (56.47%), Query Frame = 1
Query:   25 RLNLNLPINRPSKKSVDK-SLSIVKSSLVGLAKHQFELVVTSLVHYIKDIPTINLLPIEQQPLAIQSNLIVVTTIEHCFEKHSEESSSLSDETVKRQLLNTLCSLIIHPDAFNEANQKVGRHVGNIIYFISKHHFSSVFSRIVERLYSLVENNEDSTIADNLELIRYLHVPIEGLKCLFEECGKHFKFLKKYSQQVVLKGLCKSIWNWIETYPEQFCNIYKNPNTQLSELSEKLFQLVENWSENSKKRSISWPLQ 786
            R +  LPI    + +  K S    K  L+ ++K++F LV++ L   +K++  + +     +     S LI++ T+E C     +++  L +  + +QLL  +C  +      N+   ++      +++ +S ++F++VFSRI  RL  L   +ED+    ++EL++Y++V    LK L +E    FK LKK +Q  V+  L K+ WNW+E YP++F  +Y+ P T ++E +EKLF LV+ ++E++K+++  WPLQ
Sbjct:   16 RFDEQLPIKTGQQNTHTKVSTEHNKECLINISKYKFSLVISGLTTILKNVNNMRIFGEAAEKNLYLSQLIILDTLEKCLAGQPKDTMRLDETMLVKQLLPEICHFLHTCREGNQHAAELRNSASGVLFSLSCNNFNAVFSRISTRLQELTVCSEDNVDVHDIELLQYINVDCAKLKRLLKETAFKFKALKKVAQLAVINSLEKAFWNWVENYPDEFTKLYQIPQTDMAECAEKLFDLVDGFAESTKRKAAVWPLQ 270          
The following BLAST results are available for this feature:
BLAST of TCONS_00022975 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NF14.651e-3830.59Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2[more]
back to top