TCONS_00022916 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022916
Unique NameTCONS_00022916
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2148

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022916 ID=TCONS_00022916|Name=TCONS_00022916|organism=Clytia hemisphaerica|type=transcript|length=2148bp
CTTAAacttttttaaggtttttatcATTTACTAGGGTCTTGTGCAATGTT
CATCAGAAGTGTAACGTTGCACAGATCTTTTCAAAGATTGCTTTCCAAAA
ATTGCCTACCTACGCTCTGTACACAGCAACAACTAAAAAGAGAGATGTCT
TCAACCAAAGATGATTGGTCTGTCTTTGATGggaaagaacatttcaagac
cAGATCTTCCATTATCCAGCCACTCATTGCTCAAGTTTTGAAAGACAAAC
TTTTAGATGATGCGAGTGACTCACATCTTGTTGATGTTTATGATCTTGAT
GCTTTTGATGAACGGATTGAGAATCTTCTTGAAGCATTTCACGAACCGTT
TTTCCTTCACGCGCTTGCCGTTAAATCGCAACCTTTTGCAGGTATACTGA
AACATGCCACAACGAAATATCCacagctgattggtttagaATGTGCTTCT
TTTGAAGAAGCTTCCTTAGCTCGAGCTATCGGTACCAAGAGCGATCACAT
TGTTTACGACAGTCCTGTCAAAACACAACAAGAGCTCGAAAAGGCCATCG
AGTGTGGTTTCTATATCAATACTGATAACATAAGTGAAATGGAGATGATT
GATAGTATCTTAAAGAAACCAGGTCTGCAAACATCCTCGACTTTTGGAGT
ACGAATCAACCCTTTGGTTGGAGAAGGGGGTATCGCAATGTCCAGCACTG
CTGGTAAAAGTTCCAAGTTTGGATTGTTCTACTGTGATGAGACCTTCGAT
TCTTTACTGGAAGTTTTTAAAAGGTTTCCATGGCTACAAGGGGTGCATTG
TCATGTTGGATCACAAGGATGTTCTCTAGATCTTCTTTCCAACGGTGCAC
TTGCCATTTACCGAGCAGCTGAACGTCTCAATGCAGCCCTGGGTGAACAA
CAAATCAAATGTCTGGATATCGGTGGAGGTGTACCCACATCCTATACCAG
AGATAAGGAAGCTGTTTCTTTTACCGAGTACCGAAAAGTTTTACAACAAA
AGGAACCCGACTTTTTCTCCGGTAAGTACCGAGTTATTACCGAGTTTGGT
CGGTCGGTTTTCACGAAATATGGTATGACGCTAACTCATATCTCATGCGT
AAAAGGCAGTGATGTCGATTCAGTAGATGCATTTGATCGTTTCCGCGgga
aatctaatgaaaatcgaATCCTGTTGACGCACGTGGGATCCAATGCACTC
ATGCGTGAAGCATATCAATTAGCTATTAAAGCATGGCGACGTCGGTTCAC
TGTATTCAATAAAGAAGGCTCTGAGAAAGAAATCGATTCACAGGATTTCT
GTAAATATGATGTTGCTGGTCCGTTATGTTTCCAAGGTGATTATATTGCC
AAAGATGTGTTGTTGCCAAGGGATATCTCTAATGGTGACATTCTGGCTAT
CCACGATACAGGGGGTTATACATATTCACTATACAGTCATTACAACAGCC
GATCACCGCATGCTGTTTACACTGTACAAAAGAATCATAATGGAAAGCTC
GAGTTGAAATGCATCAAACCCAAAGCAACAGTCAATGAAACAATTCAGTT
TTGGAACTACGaacaatttcaataattttataGTGTTATATAGATATTTC
AAACAAGAGCTcataattttatcattttttaagatatttgataCTCTTAG
AAGTATTATCTTTAAACTTCTATTGATTTTAGTTTGacttattattttca
aaatggacttttccagaaaaaaaccgtatacccctattgaggaggtccat
catttTGTGGGTGGAAATGCtgcaaccccctggaattccaggcaatttca
ggcttaaactcctctggaattctgaattttagtaggatttaaaaggctac
ccccatggaattccagttatttttgacagatttttgtatctccctatgga
attccgccacatatcaaaccttacccccttggaacggaaatggacctcct
caacagggggtatacggttttttttttctggaaaagtccaatgaactGCT
TTTCAATAAACATAGACATTCGTTTAACTTAAATCAATTTAAAGCGAATC
TCTTTCCCGTCGAATTTCTATAGATCACTTGAGCCTTCAACTGATCAATG
CCAATAAAGTATGGTCAACAAACTTGAAAATACACGCCTCAATCTTCC
Run BLAST on NCBI

protein sequence of TCONS_00022916-protein

>TCONS_00022916-protein ID=TCONS_00022916-protein|Name=TCONS_00022916-protein|organism=Clytia hemisphaerica|type=polypeptide|length=509bp
MFIRSVTLHRSFQRLLSKNCLPTLCTQQQLKREMSSTKDDWSVFDGKEHF
KTRSSIIQPLIAQVLKDKLLDDASDSHLVDVYDLDAFDERIENLLEAFHE
PFFLHALAVKSQPFAGILKHATTKYPQLIGLECASFEEASLARAIGTKSD
HIVYDSPVKTQQELEKAIECGFYINTDNISEMEMIDSILKKPGLQTSSTF
GVRINPLVGEGGIAMSSTAGKSSKFGLFYCDETFDSLLEVFKRFPWLQGV
HCHVGSQGCSLDLLSNGALAIYRAAERLNAALGEQQIKCLDIGGGVPTSY
TRDKEAVSFTEYRKVLQQKEPDFFSGKYRVITEFGRSVFTKYGMTLTHIS
CVKGSDVDSVDAFDRFRGKSNENRILLTHVGSNALMREAYQLAIKAWRRR
FTVFNKEGSEKEIDSQDFCKYDVAGPLCFQGDYIAKDVLLPRDISNGDIL
AIHDTGGYTYSLYSHYNSRSPHAVYTVQKNHNGKLELKCIKPKATVNETI
QFWNYEQFQ
Run BLAST on NCBI

transcript from alignment at sc0000436:105425..110476-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022916 ID=TCONS_00022916|Name=TCONS_00022916|organism=Clytia hemisphaerica|type=transcript|length=5052bp|location=Sequence derived from alignment at sc0000436:105425..110476- (Clytia hemisphaerica)
CTTAAACTTTTTTAAGGTTTTTATCATTTACTAGGGTCTTGTGCAATGTT
CATCAGAAGTGTAACGTTGCACAGATCTTTTCAAAGATTGCTTTCCAAAA
ATTGCCTACCTACGCTCTGTACACAGGTATTTATATACTTTTTGCAATAT
GTTTCTCTTGATTCTACCTTTGGGTAAAAAAAAATGTCTTGTTTCCGGAA
ATCGGCCGGGTGAACTTTTTTTTGACAGTCACCAGGCTCCAAAAAGAATT
TTTTTTTGTGCTGTCGAAGAAAATAATTTTTTTTTCGAACTAAATATTTT
AGACAGGACTCAAAAGCAAAACGCTTTTTCAAGAAAACACAAAAGTTTTA
TAACAGAGTAAATATAACAGCAAAGACGAACGAACGTTCTTATATATTTG
TATTGTAAGATAGACTACACGTTTTTTTTTATTAGAACCCAGTTTATAAG
AACATTGAGGCTGAAATTCGTCGGAAAATTAAGAACATCGTAAGAACATG
CCCAGCCTCAGTTTGGAAAAAAATGACAAGAAACTACAATTTTTTCCTCT
TTTCAAGCAGTTTTAACCCAACTTAAGCATGGATTTTCTAAAATCGAGAG
TCCAAATTGTACCAATTTTAAGTGCTCTTTTTTTTGCATGATATTATCAA
TTTAGAGTACACGCTTTTTTTTTATAAGAATGGTATTTTTTCATTTCATC
ATGGATATTCTTAACTTTTTGGCGAAATTAATCCAAAAATATTCTTACGG
TGGATTAAAACTAAAATCTATCGCTAGATTTCAAAAAATGTAGTCCTCCA
AAACAAAGGAACCGCTACTGTAGATACAATCCGTTGTCATGATTACGGCG
CGTTCCATGCGCTTTTTGGATGGGAAATAAGTAGCTTCAATTTCTCTTGC
CTGAAAAGGGTTAAAGTTTCACCTCTAGTCCTTCAGGTTTGAAACTCAAT
GGTTGCGACCAAATTCATTGTTTGTTCCGTTTGTTCTAACAATGCTTTTG
TTTGTTTCACATGCGTTCGATCGCAAACATTTTATATAACTGAGATAAAA
AGAGAGAAAAAGCTCAAAAGCATTTTTGATTTATAAGAGAGAACTTGTAA
CCACAATTAAGAAAGTTTTTACTTGTGAAACTTTTCGAGAGATCCTCATA
GATGTTTACGACGCAGCAAAAGATACCTCTGATATTCAAGTCAACGTGTC
TAGTTCTCATCGGGGGCGGGGGGGGGGGGGTTTGGGAAAAAAAAAAAAAA
GGGATTGGGGGCCGGGGGGGGGGGGGTTTGGGAAAAAAAAAAAAAAGGGA
TTGGGGGCCGGGGGGGGGGGGGTTTGGGAAAAAAAAAAAAAAGGGATTGG
GGGCCGGGGGGGGGGGGGGGCTACTTAGGCAAAAATGGATGCAGGGTATG
TGCGGACGGTAAGGGTCGGTTTTTCACCTTTGAAAGTCTCTCTAAGGGTT
GCAAAATTCATAAAAATTTAAATTAGTCTCTCTAAGGGTCGCTAGGGATT
TCTAGGAAATCATTTTTGATTTAGAGTGACAATTTCTGTTGTGTTTTTTT
TTGCTCAGTTTAACCCTGTACTGTACTGTATTACGGTTCTGTAATCCTAG
TATTCTTGGCTACGTTTACACATTTGGGTCAAGCGTTATCGTTTGCAATC
GCCAAATTATCTAAAAAGTTTTTATGTTACAAAATAGTAAAACCTGATTG
CTTATAAAAAAATGTGTATTTTTCGATAGGATATTTTACGCTGTATCATT
TTAGTCTATTGCAGTGCCGAGGGAAGCATTTTCATATTGGGGGGGCTGAA
GTTTAGTGACACCGCGAGGGCCAACCATGGTTTGGCCCGAGGGGGGGAAT
TTTGAAAATTTGAGCTCTAGATTGCTTAAAAATACACTCAAAACATGCAC
TTAAAGACAATTATGACAAATTAAAAAAGAAAAACTTTGCATTTTGCAAA
ATAACCATTTTTGAAAAAATCATTGGGGGGGGCATAGCCCCCCCCCCAGT
TGCTACGGCACTGTATTGAAACTGTAAAAACAATCTATATCCCTATTTCG
CTACGCAAATAATCTATATTCCTAAAGAAAATCAAATAACCAATAAAAAC
ACGCAAATAAGTTTAGTATTTCTGCTTAAAAAGAAAAATCAAGAGTGTAA
AGCTAAGGCTACACTGATAGTTTTTTCAGGCGGCTGCAATGCAATTGTTT
GCAATTGTTGCAATTCTAGCCATCGAAAAAAAGGAACCAGGAAAAACTTC
AAAAAAACATTCTGAAATTAAATGTAAAAGAAATTGTTTTGCGGCCGGTC
GGGTGAGTTTTTTTTTCGTCATCTGCCGTTCCGGAAACAAGACTCTTTTT
TTTGGCCTTAATCACACAAGTTAGAATGTATCAAGGAGGTGACATTTTAT
CTGTCAGCAAGATAGTTTTCTGTCTCCTTGAATATAGCTTTGTTGCAAAT
CTGACTCAACAATCTGATTCAACAAATTGCTACCATTTTGGTCGAGTGGT
ATATCAGTCAAGGCGCAGTAATGTAGTGGTCATCGTTCTTGACTTCCGTG
CTGGAGGTCAGGGTTCGATTCCCACTCGGTGCTGCGATTTACTTGACAAG
TGAATGTACCTTGGCCCGGGTCAACCCATCCCATGTGAGGGGAATAGGGT
ACCGTCACTCTGATACAAGAGTGTGGGGAGTTATGCTGGACATTGAATAT
GGTGTGGTGATGGTACTCATATGTTCAATACCTGTGAGAACGCAAGGTGT
TCCCGTACTGTTCGAGTATCATCATCGATACAGCACGGCTCTGATGTGTC
GCGAGCACAGAGTACAATGTCTGGTAAGTACTCTGATTTACCTATCTAGG
GGTAGGAAACTATCCCGGGATAGGGCCCGGTCCGATGATATCGGAGGGTC
AGCTTCTCAGCTTCTTTTCCATCGGTATTTCAGTCAGTATAGAGATAAAT
TTATTTATCTGATACTCGGAGTTTCGTGCCGTTTCAGGGCAGTTTTCAGT
CTTAAATTGTATATGCTTTTACATTTTCAGCAACAACTAAAAAGAGAGAT
GTCTTCAACCAAAGATGATTGGTCTGTCTTTGATGGGAAAGAACATTTCA
AGACCAGATCTTCCATTATCCAGCCACTCATTGCTCAAGTTTTGAAAGAC
AAACTTTTAGATGATGCGAGTGACTCACATCTTGTTGATGTTTATGATCT
TGATGCTTTTGATGAACGGATTGAGAATCTTCTTGAAGCATTTCACGAAC
CGTTTTTCCTTCACGCGCTTGCCGTTAAATCGCAACCTTTTGCAGGTATA
CTGAAACATGCCACAACGAAATATCCACAGCTGATTGGTTTAGAATGTGC
TTCTTTTGAAGAAGCTTCCTTAGCTCGAGCTATCGGTACCAAGAGCGATC
ACATTGTTTACGACAGTCCTGTCAAAACACAACAAGAGCTCGAAAAGGCC
ATCGAGTGTGGTTTCTATATCAATACTGATAACATAAGTGAAATGGAGAT
GATTGATAGTATCTTAAAGAAACCAGGTCTGCAAACATCCTCGACTTTTG
GAGTACGAATCAACCCTTTGGTTGGAGAAGGGGGTATCGCAATGTCCAGC
ACTGCTGGTAAAAGTTCCAAGTTTGGATTGTTCTACTGTGATGAGACCTT
CGATTCTTTACTGGAAGTTTTTAAAAGGTTTCCATGGCTACAAGGGGTGC
ATTGTCATGTTGGATCACAAGGATGTTCTCTAGATCTTCTTTCCAACGGT
GCACTTGCCATTTACCGAGCAGCTGAACGTCTCAATGCAGCCCTGGGTGA
ACAACAAATCAAATGTCTGGATATCGGTGGAGGTGTACCCACATCCTATA
CCAGAGATAAGGAAGCTGTTTCTTTTACCGAGTACCGAAAAGTTTTACAA
CAAAAGGAACCCGACTTTTTCTCCGGTAAGTACCGAGTTATTACCGAGTT
TGGTCGGTCGGTTTTCACGAAATATGGTATGACGCTAACTCATATCTCAT
GCGTAAAAGGCAGTGATGTCGATTCAGTAGATGCATTTGATCGTTTCCGC
GGGAAATCTAATGAAAATCGAATCCTGTTGACGCACGTGGGATCCAATGC
ACTCATGCGTGAAGCATATCAATTAGCTATTAAAGCATGGCGACGTCGGT
TCACTGTATTCAATAAAGAAGGCTCTGAGAAAGAAATCGATTCACAGGAT
TTCTGTAAATATGATGTTGCTGGTCCGTTATGTTTCCAAGGTGATTATAT
TGCCAAAGATGTGTTGTTGCCAAGGGATATCTCTAATGGTGACATTCTGG
CTATCCACGATACAGGGGGTTATACATATTCACTATACAGTCATTACAAC
AGCCGATCACCGCATGCTGTTTACACTGTACAAAAGAATCATAATGGAAA
GCTCGAGTTGAAATGCATCAAACCCAAAGCAACAGTCAATGAAACAATTC
AGTTTTGGAACTACGAACAATTTCAATAATTTTATAGTGTTATATAGATA
TTTCAAACAAGAGCTCATAATTTTATCATTTTTTAAGATATTTGATACTC
TTAGAAGTATTATCTTTAAACTTCTATTGATTTTAGTTTGACTTATTATT
TTCAAAATGGACTTTTCCAGAAAAAAACCGTATACCCCTATTGAGGAGGT
CCATCATTTTGTGGGTGGAAATGCTGCAACCCCCTGGAATTCCAGGCAAT
TTCAGGCTTAAACTCCTCTGGAATTCTGAATTTTAGTAGGATTTAAAAGG
CTACCCCCATGGAATTCCAGTTATTTTTGACAGATTTTTGTATCTCCCTA
TGGAATTCCGCCACATATCAAACCTTACCCCCTTGGAACGGAAATGGACC
TCCTCAACAGGGGGTATACGGTTTTTTTTTTCTGGAAAAGTCCAATGAAC
TGCTTTTCAATAAACATAGACATTCGTTTAACTTAAATCAATTTAAAGCG
AATCTCTTTCCCGTCGAATTTCTATAGATCACTTGAGCCTTCAACTGATC
AATGCCAATAAAGTATGGTCAACAAACTTGAAAATACACGCCTCAATCTT
CC

Coding sequence (CDS) from alignment at sc0000436:105425..110476-

>TCONS_00022916 ID=TCONS_00022916|Name=TCONS_00022916|organism=Clytia hemisphaerica|type=CDS|length=3060bp|location=Sequence derived from alignment at sc0000436:105425..110476- (Clytia hemisphaerica)
CAACAACTAAAAAGAGAGATGTCTTCAACCAAAGATGATTGGTCTGTCTT
TGATGGGAAAGAACATTTCAAGACCAGATCTTCCATTATCCAGCCACTCA
TTGCTCAAGTTTTGAAAGACAAACTTTTAGATGATGCGAGTGACTCACAT
CTTGTTGATGTTTATGATCTTGATGCTTTTGATGAACGGATTGAGAATCT
TCTTGAAGCATTTCACGAACCGTTTTTCCTTCACGCGCTTGCCGTTAAAT
CGCAACCTTTTGCAGGTATACTGAAACATGCCACAACGAAATATCCACAG
CTGATTGGTTTAGAATGTGCTTCTTTTGAAGAAGCTTCCTTAGCTCGAGC
TATCGGTACCAAGAGCGATCACATTGTTTACGACAGTCCTGTCAAAACAC
AACAAGAGCTCGAAAAGGCCATCGAGTGTGGTTTCTATATCAATACTGAT
AACATAAGTGAAATGGAGATGATTGATAGTATCTTAAAGAAACCAGGTCT
GCAAACATCCTCGACTTTTGGAGTACGAATCAACCCTTTGGTTGGAGAAG
GGGGTATCGCAATGTCCAGCACTGCTGGTAAAAGTTCCAAGTTTGGATTG
TTCTACTGTGATGAGACCTTCGATTCTTTACTGGAAGTTTTTAAAAGGTT
TCCATGGCTACAAGGGGTGCATTGTCATGTTGGATCACAAGGATGTTCTC
TAGATCTTCTTTCCAACGGTGCACTTGCCATTTACCGAGCAGCTGAACGT
CTCAATGCAGCCCTGGGTGAACAACAAATCAAATGTCTGGATATCGGTGG
AGGTGTACCCACATCCTATACCAGAGATAAGGAAGCTGTTTCTTTTACCG
AGTACCGAAAAGTTTTACAACAAAAGGAACCCGACTTTTTCTCCGGTAAG
TACCGAGTTATTACCGAGTTTGGTCGGTCGGTTTTCACGAAATATGGTAT
GACGCTAACTCATATCTCATGCGTAAAAGGCAGTGATGTCGATTCAGTAG
ATGCATTTGATCGTTTCCGCGGGAAATCTAATGAAAATCGAATCCTGTTG
ACGCACGTGGGATCCAATGCACTCATGCGTGAAGCATATCAATTAGCTAT
TAAAGCATGGCGACGTCGGTTCACTGTATTCAATAAAGAAGGCTCTGAGA
AAGAAATCGATTCACAGGATTTCTGTAAATATGATGTTGCTGGTCCGTTA
TGTTTCCAAGGTGATTATATTGCCAAAGATGTGTTGTTGCCAAGGGATAT
CTCTAATGGTGACATTCTGGCTATCCACGATACAGGGGGTTATACATATT
CACTATACAGTCATTACAACAGCCGATCACCGCATGCTGTTTACACTGTA
CAAAAGAATCATAATGGAAAGCTCGAGTTGAAATGCATCAAACCCAAAGC
AACAGTCAATGAAACAATTCAGTTTTGGAACTACGAACAATTTCAATAAA
TGTTCATCAGAAGTGTAACGTTGCACAGATCTTTTCAAAGATTGCTTTCC
AAAAATTGCCTACCTACGCTCTGTACACAGCAACAACTAAAAAGAGAGAT
GTCTTCAACCAAAGATGATTGGTCTGTCTTTGATGGGAAAGAACATTTCA
AGACCAGATCTTCCATTATCCAGCCACTCATTGCTCAAGTTTTGAAAGAC
AAACTTTTAGATGATGCGAGTGACTCACATCTTGTTGATGTTTATGATCT
TGATGCTTTTGATGAACGGATTGAGAATCTTCTTGAAGCATTTCACGAAC
CGTTTTTCCTTCACGCGCTTGCCGTTAAATCGCAACCTTTTGCAGGTATA
CTGAAACATGCCACAACGAAATATCCACAGCTGATTGGTTTAGAATGTGC
TTCTTTTGAAGAAGCTTCCTTAGCTCGAGCTATCGGTACCAAGAGCGATC
ACATTGTTTACGACAGTCCTGTCAAAACACAACAAGAGCTCGAAAAGGCC
ATCGAGTGTGGTTTCTATATCAATACTGATAACATAAGTGAAATGGAGAT
GATTGATAGTATCTTAAAGAAACCAGGTCTGCAAACATCCTCGACTTTTG
GAGTACGAATCAACCCTTTGGTTGGAGAAGGGGGTATCGCAATGTCCAGC
ACTGCTGGTAAAAGTTCCAAGTTTGGATTGTTCTACTGTGATGAGACCTT
CGATTCTTTACTGGAAGTTTTTAAAAGGTTTCCATGGCTACAAGGGGTGC
ATTGTCATGTTGGATCACAAGGATGTTCTCTAGATCTTCTTTCCAACGGT
GCACTTGCCATTTACCGAGCAGCTGAACGTCTCAATGCAGCCCTGGGTGA
ACAACAAATCAAATGTCTGGATATCGGTGGAGGTGTACCCACATCCTATA
CCAGAGATAAGGAAGCTGTTTCTTTTACCGAGTACCGAAAAGTTTTACAA
CAAAAGGAACCCGACTTTTTCTCCGGTAAGTACCGAGTTATTACCGAGTT
TGGTCGGTCGGTTTTCACGAAATATGGTATGACGCTAACTCATATCTCAT
GCGTAAAAGGCAGTGATGTCGATTCAGTAGATGCATTTGATCGTTTCCGC
GGGAAATCTAATGAAAATCGAATCCTGTTGACGCACGTGGGATCCAATGC
ACTCATGCGTGAAGCATATCAATTAGCTATTAAAGCATGGCGACGTCGGT
TCACTGTATTCAATAAAGAAGGCTCTGAGAAAGAAATCGATTCACAGGAT
TTCTGTAAATATGATGTTGCTGGTCCGTTATGTTTCCAAGGTGATTATAT
TGCCAAAGATGTGTTGTTGCCAAGGGATATCTCTAATGGTGACATTCTGG
CTATCCACGATACAGGGGGTTATACATATTCACTATACAGTCATTACAAC
AGCCGATCACCGCATGCTGTTTACACTGTACAAAAGAATCATAATGGAAA
GCTCGAGTTGAAATGCATCAAACCCAAAGCAACAGTCAATGAAACAATTC
AGTTTTGGAACTACGAACAATTTCAATAAATGTTCATCAGAAGTGTAACG
TTGCACAGATCTTTTCAAAGATTGCTTTCCAAAAATTGCCTACCTACGCT
CTGTACACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012880XLOC_012880Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022916-proteinTCONS_00022916-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022916-exon-sc0000436-1575043694:110351..110476TCONS_00022916-exon-sc0000436-1575043694:110351..110476Clytia hemisphaericaexon
TCONS_00022916-exon-sc0000436-1575043694:105425..107446TCONS_00022916-exon-sc0000436-1575043694:105425..107446Clytia hemisphaericaexon
TCONS_00022916-exon-sc0000436-1510915933:110351..110476TCONS_00022916-exon-sc0000436-1510915933:110351..110476Clytia hemisphaericaexon
TCONS_00022916-exon-sc0000436-1510915933:105425..107446TCONS_00022916-exon-sc0000436-1510915933:105425..107446Clytia hemisphaericaexon
TCONS_00022916-exon-sc0000436-1491911889:110351..110476TCONS_00022916-exon-sc0000436-1491911889:110351..110476Clytia hemisphaericaexon
TCONS_00022916-exon-sc0000436-1491911889:105425..107446TCONS_00022916-exon-sc0000436-1491911889:105425..107446Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000436supercontigsc0000436:105425..110476 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.577351	0.465411	0.857145	1.41655	2.57518	2.64629	27.2528	29.0864	21.1268	13.0263	12.4292	15.9406	19.4624	18.2748	20.0227	29.83	7.85598	5.79296	17.8284	16.8314	5.6102	5.37931	5.80902	6.26649	3.44877	2.88866	3.72376	2.50642	14.5222	7.99851
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000183Orn/DAP/Arg_de-COase
IPR022643De-COase2_C
IPR009006Ala_racemase/Decarboxylase_C
IPR022644De-COase2_N
IPR029066PLP-binding_barrel
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022916 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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