|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022903 ID=TCONS_00022903|Name=TCONS_00022903|organism=Clytia hemisphaerica|type=transcript|length=717bp
GCCCCATTGTCAAAATGTCGTCGTCCAAAGTAGCTGTAGTTTTGGTCGCT
GGAGGGGCTTTAACtgttggatttcattttttgatgCAGTCCATTTCACC
TTCGAAAGATGATATGATCAGAAGACTCCCGCCTGACAAGGTTACACCAG
AAGCTCTATCAAAGATTGAGAAGCGCAATCAACTGATATTTGATTCTTTG
AAAGAAACTATGAACTCTGATGAGCCTGTTTGGAAATTACAAGCCAAAGT
TCAAGAGATGCAGAAGAAAATGCCCCGAGAACGTTAGGAATTGATTAAGC
TAAATTGAAATGGTGTTGTAGAGTGCAAAAAATGGTTTGTAGGGTGAAAA
AATGGTTTGAATCTTACCATTGCAATactcctttttttataagaacaatg
agactCAAAATCGCCGAAAATATGAAGAATTTAAGTACAATGCTTGTTga
tgagcctgaaattactcaatttcaagcaatttaggggttaaagtagtaaa
aactgtgtataacgcctaaaataccttAGTTACACCCTGTAAATAAAAGA
ATATGATTAGAACTATTTGAgactcaaagtgccaaaaaaaataagaacag
gctcagcattttactggttcttataaaaacaagtgatactttgatggacc
tacctggattatgcatttaacacgtttataagttaggtcacgttttttta
gctgaaatataccccaa Run BLAST on NCBI transcript from alignment at sc0000436:7996..8899- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022903 ID=TCONS_00022903|Name=TCONS_00022903|organism=Clytia hemisphaerica|type=transcript|length=904bp|location=Sequence derived from alignment at sc0000436:7996..8899- (Clytia hemisphaerica)
GCCCCATTGTCAAAATGTCGTCGTCCAAAGTAGCTGTAGTTTTGGTCGCT
GGAGGGGCTTTAACTGTTGGATTTCATTTTTTGATGCAGTCCATTTCACC
TTCGAAAGATGATATGATCAGAGTAAGTATATTTTTTTACATCTTAGCCC
TAAGAAGTCCGAGAATCATTTTGCAGTCTTTGCATTTTGACGAGTTTCTA
TCTATTATATGTATGTTGAGTTGCATAACTTTCCAATAATAATTTTTATA
GCTATATATATAACTGTTTTAAACCACTTTAACCCTACTATATGTATTTT
CTTTTACAGAGACTCCCGCCTGACAAGGTTACACCAGAAGCTCTATCAAA
GATTGAGAAGCGCAATCAACTGATATTTGATTCTTTGAAAGAAACTATGA
ACTCTGATGAGCCTGTTTGGAAATTACAAGCCAAAGTTCAAGAGATGCAG
AAGAAAATGCCCCGAGAACGTTAGGAATTGATTAAGCTAAATTGAAATGG
TGTTGTAGAGTGCAAAAAATGGTTTGTAGGGTGAAAAAATGGTTTGAATC
TTACCATTGCAATACTCCTTTTTTTATAAGAACAATGAGACTCAAAATCG
CCGAAAATATGAAGAATTTAAGTACAATGCTTGTTGATGAGCCTGAAATT
ACTCAATTTCAAGCAATTTAGGGGTTAAAGTAGTAAAAACTGTGTATAAC
GCCTAAAATACCTTAGTTACACCCTGTAAATAAAAGAATATGATTAGAAC
TATTTGAGACTCAAAGTGCCAAAAAAAATAAGAACAGGCTCAGCATTTTA
CTGGTTCTTATAAAAACAAGTGATACTTTGATGGACCTACCTGGATTATG
CATTTAACACGTTTATAAGTTAGGTCACGTTTTTTTAGCTGAAATATACC
CCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022903-exon-sc0000436-1575043694:8778..8899 | TCONS_00022903-exon-sc0000436-1575043694:8778..8899 | Clytia hemisphaerica | exon |
| TCONS_00022903-exon-sc0000436-1575043694:7996..8590 | TCONS_00022903-exon-sc0000436-1575043694:7996..8590 | Clytia hemisphaerica | exon |
| TCONS_00022903-exon-sc0000436-1510915933:8778..8899 | TCONS_00022903-exon-sc0000436-1510915933:8778..8899 | Clytia hemisphaerica | exon |
| TCONS_00022903-exon-sc0000436-1510915933:7996..8590 | TCONS_00022903-exon-sc0000436-1510915933:7996..8590 | Clytia hemisphaerica | exon |
| TCONS_00022903-exon-sc0000436-1491911889:8778..8899 | TCONS_00022903-exon-sc0000436-1491911889:8778..8899 | Clytia hemisphaerica | exon |
| TCONS_00022903-exon-sc0000436-1491911889:7996..8590 | TCONS_00022903-exon-sc0000436-1491911889:7996..8590 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000436 | supercontig | sc0000436:7996..8899 - |
Blast
The following BLAST results are available for this feature:
|
