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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022900 ID=TCONS_00022900|Name=TCONS_00022900|organism=Clytia hemisphaerica|type=transcript|length=1255bp
TATTGGTGATGTAGGCTGAGCTTTAAGCCCTGGGATTTCCCTATATTACA
TGGAAACAAATATGGTAGAGAAGCCGTGAATTTGTAAACAATctcaaaaa
agaacatttttctgcaaaaaaatactGCTAGCACCGCTAGCACCAGCACG
ATGTCAACATCAAGGCCAAAATACTTCACTCCAAATGAAGTAAGTGTTCA
CAATACACAGAAAGACATATGGGTTTCCTTTTTGGGAAAGGTGTACGATT
TGACTCCTTTGAGTGTTCAACATCAAGgtGATGTACTTTTAAAACCTATC
ATAGCAAACGGTGGTAAAGATTTATCTCATTGGTTTGACAAGAAAACTAA
AGATattcGAATGTACGTAGACCCGATCACCAAATGTCAGTTTCCCTATA
CTCCTTTTGGACGTATCATACACACACCTCCTCTTTGTCCAAGGACGGAT
TGGGCAAATGATTTTGGGAGACCCTGGTGGAAGAATGAAAATTACTGTAT
TGGTGTACTTTCTCAAAAAACGCGAAAGATTCGAATTGTAAACACGTTAA
CTTCCCAAGAACAAGTTCTAGAGGTTTGCTCGGAAGAGAATATGCGAGAA
ATCCAGAACCGTTATTTTCACTACAACAAGCATGCTGGTAGTTACACTTG
GAAATTCAATGGACAAAATTTGAACATGGAAAGAACTTTACAAGAAAACA
ATGTAAAAGATGAAAGTgaagatttttatgttttgggAATGGATGAAGAG
CAGTATTTGCCAGCTCTTCACCTATATTTCAATGATGATCTGACTGAGGC
TTGATTACGAAGTATGTACGATCTCGAAAAGCGTGAACATCTCTCATtgt
aaaatattggtaaaataCCGTAGAACGCCTGACTGTTCTTGTTTTCTGGA
AAACTTTCCTGGCGCATTTCATTATCAGNACGCCTGACTGTTCTTGTTTT
CTGGAAAACTTTCCTGGCGCATTTCATTATCAgaattatttgtttttatc
GAGCATAACAAACTAACAACGGCAAAAAGGCAAAGAAAGTTTATCCGTTC
TTCGGTAGAGATGGTTTTAGATTGACGGCTGACTAGTggaaatttctctt
ttttttatgGGTAAATTATTCGAAACACATTTTATtgtaaaaataacttt
ttgtaaATACTTCGCGATAAAAATAATATTGCTTCCATTacctttaaaaa
attgaatatgatgtTAATACTTTACTGCGCAGGGGAGTCAATAAATTTAT
TGGAG Run BLAST on NCBI protein sequence of TCONS_00022900-protein >TCONS_00022900-protein ID=TCONS_00022900-protein|Name=TCONS_00022900-protein|organism=Clytia hemisphaerica|type=polypeptide|length=217bp
MSTSRPKYFTPNEVSVHNTQKDIWVSFLGKVYDLTPLSVQHQGDVLLKPI
IANGGKDLSHWFDKKTKDIRMYVDPITKCQFPYTPFGRIIHTPPLCPRTD
WANDFGRPWWKNENYCIGVLSQKTRKIRIVNTLTSQEQVLEVCSEENMRE
IQNRYFHYNKHAGSYTWKFNGQNLNMERTLQENNVKDESEDFYVLGMDEE
QYLPALHLYFNDDLTEA Run BLAST on NCBI transcript from alignment at sc0000436:236292..246390+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022900 ID=TCONS_00022900|Name=TCONS_00022900|organism=Clytia hemisphaerica|type=transcript|length=10099bp|location=Sequence derived from alignment at sc0000436:236292..246390+ (Clytia hemisphaerica)
TATTGGTGATGTAGGCTGAGCTTTAAGCCCTGGGATTTCCCTATATTACA
TGGAAACAAATATGGTAGAGAAGCCGTGAATTTGTAAACAATctcaaaaa
agaacatttttctgcaaaaaaatactGCTAGCACCGCTAGCACCAGCACG
ATGTCAACATCAAGGCCAAAATACTTCACTCCAAATGAAGTAAGTGTTCA
CAATACACAGAAAGACATATGGGTTTCCTTTTTGGGAAAGGTGTACGATT
TGACTCCTTTGAGTGTTCAACATCAAGGTATGTTTGTAGctttttttatc
caatttttttatgttttgaactATACATACTTTTACTGGACTGGTGGTGT
TCTGATATTATGCGTATACATCATTGACATTGTGTTATTTTTAATACTCA
ATTTATTTGACATGGTCAGGCTCTGGAGGTCACtcacagttacatcaata
tgccttcttacctgtctttaaaaatataaataaaagtaatcacggaaaag
gacgcgaaaaaaaaagacataagtgtgagaacagagtaatcaaactcgtc
agaaaaagtaccattagaagtcataaaaaatcaacctaaataaatgaaat
caaaatcccagagaacttcataattccccaaacaacattacattactatg
tcaaactcccattacataaattttacaattacgtcagagNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNgaaagggtaattacattttattgttcgcttctt
ttttaaagattggccgggttggaaaagtatgaatttctttgtacatattt
tatctACCCCAAATATtaaggaggctgagttttaaacaaatggtcaagtt
gaaacgaacgataaatgtatcaaggtctgttttatttaccccctggtgac
ttaacaaaagagacttaactcgatgttacaatccaattattgaaagtttg
tctcttcctttttataatgagcgagacatacgttctctgattacgcaatt
ttcatattgacattttcgaggcattttgatgtaactgactcACAGTCACT
CACagtcagtctgggaaatcctctcaattgcacgcttatgttccgagggc
aTAAGCGGGCAATTGCATGgtggttataatttacgcccgctcacgccccg
gttgaaattgcttagggatttcaaggggttcagaattctctaattcgggc
gaaggcatggtttaacaggcaatccatttttacggaatcttcttcTACGA
TAAATTTTGAGTAAAACTGCCCGCCTAGGGCAAAATTATTTTAGGGAACC
AAAATGCAAAAAGTGCATCTGggagctgaaaattttttttcagtaaacat
tttcaaatttatatgtaTCATTTCTCATAGTATCTTAAACTCATTTGCAG
TTGTTTTAGAGCTAACAGCACTTCCGAAACttgattttgccatttttcag
gctaaaaagccttgaaattaaagctttttagcttaaaaacaGCCACAGCC
ATATCACAAAAATACAATGAATGCTGCAGTTTTAGTTATTCAAAATCCAA
CATAGGCCAACAATTGATCAAGAAAACTCATTTACAGCATGTTTGGCCTT
CCCTGGATTGAACGGTTGaggattttattttccaaaaatcttggttacgg
aatgacggaaaaattaaaaatgctgtaatattttaaggaaacattttcaa
attaaaatatttggcaagttTCTACCTCTTACTGAGTACTTTCAAATCAG
GCATAAATTGATTGCCATTGGGAGAAGACTGGTTTTTaattgagaaatca
tttttggtTACGGAATGATGGAAAATTATCTTACTttactgaaataaaaa
ttatgaaattttcacttaACCATATCACctcaaacattttttaagcTGAA
ACAGTAACTTTGTATCAAAATCTAAGCATTTGATACATCTTGAAAACCTT
TCCATTAACTCTATATAGGGTTCTAAAGTTGAATAAGATTTTTACAGCAG
ATTCTGTTTCATATCATGTGTACTGCATTcatgataaatttgaaaaattg
gttgagtgttaccaaaaatctttttgattttctcaaagtgTTATCGTTGC
TATGGCTAAAAATCATGACTTTGATGGCATAAACAACAGTCAGTGTCAAT
TTATTAACCACTTTAACAATGCAAATTTTTGGGTGACACTCTGTTTCATG
GAAAAAATCGGCAgtttttgagctttaaaatgCCATAACTTTAGTTTCGC
TTGTGCTACAGACTTGTATGTGCTctcatttttcagcattttttattgta
catcctctgaaatcaaaatcattcaaTGACAATCTCCACTTTATGCACAA
TATCCTTTTGAAATAAAGGTGGTCTCTGgttccctttaaaataattttgc
cccctaggcttttgaaatacacctttcccgtaattcaaatttctcagaaa
tggcccgggaaaatgtgcgctccaccgttgtgtataaaattgtttgggag
gtaaaaaacgcgttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNgcgcattagttttacgaattacgggaaa
ggtgtattcaacagagctttcggaaggaattgcgtgtcaaaaatataaga
aatttaaaagcgtgcaattgcacgcttaccgcAAAAGCCGTCACCTGTCA
ACcttgcttaacgcttaccgcccgtttcagaacaatttcgataggCCTgt
ataaaaattctgccattttgattaaccgtgcaattgcgcgcttacggcct
cAGAACATAAGcctgcaattgagaggatttcccagactgacaGTATATAA
GTTTTGGGATGTGCTGGGCTGCTGGTTGACCAAAAACCggtcagaaaaaa
atattaagctttGTTTGTATCTGGCAGCTCGTGAAATTTTTCCGTCCAAG
CATTAAAAACTGCTTTCAGAAAGAAACATCGTGTCCATCTTATATCTTAT
CAGATTACAACAGATAGCAcctctcttttattttatgtCATCAAGGAAGA
TTCAAGGTCAGCAGCAGGACCCTCTCGGCGCTCCGGAAACTTCCTGAGTT
TTCTggagcagctaaaaaaacaatatttttctcTCCGAAAAGTTCTGGAG
CTCTTCCCTTGCTTCCGGAGTAAGTGATTCTTAACACAGTTCCGGTGCAG
ACCAATCGCCGAAAATCGTGCTCCAGAATTTTCCAGTAGTATTTCGGAGC
ACGAAAAAAACAGCACTTTTAGCTCCGGATGTTTCTGGAtcggagcgccg
ggagggtccttcAGTAGCCCCTGTAGGTTTATATGATTAAAGAAAAAAGG
TTTATCTTTTAGATCATCAAAAGCCATGAGTTTTTTGTgataaaaaataa
tggaaaatgGGGAACTTCCCtaaattctgcataatttatgcaaaattaaa
ggtATTTTTTACTACTAAAACGTTCATATGGTACCATCTGATCTATAAAA
GTTGGAAAGTTGTTGTACTgtagtatattttttttctcagtttgCAAAGC
TCTATCAGGTGACTATAATATATGAATACCTTAAGGGACagtaaaggaag
aaattttcgtggaATTTTATTTCGCGGTTCACTTATCACAGCTAGCTCAA
AATTTGGAAGTTTcacagaatttaattttgtggttgagagaaaaaccgca
aaattttaAATCCCGTAAAAATTTattctgcaaaaatttcttcccatgAA
AATTTCTCCCCTTAAGGTAAATTTTCCAAACTTATAAACTTTTGCTGGTG
TACCCAGGGccttgtttttaaaaaagacTATCatatgatagagctcttca
aactgagcaaaaaagtgtattacaccaaagtcccaacttctctagatcaa
aagttatgagcctatttgtggtcaaaaaggtgtttaattttgcataaatt
aatgcagattgtggggaaatatcctgttttccatcagatttttaccacaa
atgggccaataaattttgatctagagaagttgggactttggtgtaataca
cttttttgctcagtttaaagagctctatcatgtgatataggtctttttta
atttgaagaccccccaaaaatcgccaattactcgttacttgcacgataat
atcgtggaaactttttgattttggaatctacatatactaattcgcgagtt
tccaccaaaaaaagttagttctaagatgtgtgtcacgaaatgaaacattt
atcgacctcagcagcgggactatcataaaaagagagaaagactGAATGCA
ATACATAATAGAAGAAAATTAAAATGCTTTCCTGCTAATTGGTGAACGAT
AAACCATATATTCAACGTGATAAATTCGATATCGAAATTATTTAGTCTTG
CTTTAATGATATTCGTATCAAGTTATATAtcatcaagctcgactgaataa
ttttcgatatccgatttttcttgtcgaatatctgcttattagcgtattat
gtgattaattaatagaactagaactagaaaattatgatttttctggcctt
aaaataataaataataaaacagAACTACGCAAAAACTACGGGCTTTCAAG
CTTGGTAATATTTAAATTCCAAATCAGCACCctcgaaatcttgaaaataa
gtGAAGCATTTTGAGGGGGCATGCCGTGTATAGTTTCATTATTAAAATGT
CACTGGAACttcaaaaaaaacatgttttagcATGATACaatgtaactttt
tatttttgagtttAGATCTGAAGATGATCAAATTGATCggaaataaatct
attgtcaaattaaataccgggtgcgccacaaaaaagtttctctctttaaa
agtaattttctcgaaatctaaaaattttaaaagaaccattcctattttat
tggNtaaatttaaagtaaaaatttgataggtcaatttttaacgttttcga
gcactttctgaaagtaacatttttattcaattggacATAAcctttgatct
aatgaatcaaatttaataaatgacccatcaaaattcaagtctatctttct
tctttccaatgaaataagaatggttcttttaaaatttttagatttcgaga
aaattagtttcaaagagagaaactttttNataaaaaaattacttttggaa
agtgctcaaaaatgttaaaaatcgacctatcaaattattcagaagcataa
ttacatgatgtatcagtatttttgtttcagtcattaaaaagNTACCATTT
TTGGTCTTTTTATCTAGCAAAATTGTTGACTTGACTCAACTTTTTACCAA
ATTGTATGAGATTAATAAAAAATTGCGATGTATTTCTGATACATACTTCT
ACCCAAATTGAAGTTCAGTCAAAAACCAATCATTTTCAAGCACTTAAAAT
GCCTATTCTTGCCATTCGTGctgattttgttgttgttattttttgttttc
ttcttttaggtGATGTACTTTTAAAACCTATCATAGCAAACGGTGGTAAA
GATTTATCTCATTGGTTTGACAAGAAAACTAAAGATGTAAGTATTATTAG
ATCACCACAATCCCTCAATTCATACTTTCACAAGCTTCACTAGAACATCC
TTCTACATCGGAATTAAAATAAAGCCGCTCGTCAGGAAAAGCagctttca
aaaacttttagctGAGTGTGCAGTGATTTAAATAAGATGAAGTTACTTAA
GCTGCATATTATGGAAGAATTCTGGATTGTTTTGGTATGATACATTTAGC
AGTTAAATCACAACACTCTTTTTTCTTCAGATTCGAATGTACGTAGACCC
GATCACCAAATGTCAGTTTCCCTATACTCCTTTCGGGCGAATCATACACA
CACCTCCTCTTTGTCCAAGGACGGATTGGGCGAATGATTTTGGAAGACNT
AAAaatgtaataaagtctctctaagggtataacttttttcaaaaatcgaa
aaaaaaaattcaaaaagtctctctaagggtcaccttttcagcaaaaatca
gtctctctaagagtcggttttcggaggtcccgtccgcacatacccctcat
tcgtcAACCCTAGTACCTCCCGGGTACTTTTACAAGCTTCACTAGAACAT
CTTCTACATCGGAATTAAAATAAAGCCGCTCGTCAGGAAAAGCAGCTTTC
AATAACTTTTCACTGAGTGTGCAGTGCAGGGCCGGCGAAACtgggggggg
ccggggggccatggccaccccacttttttgctaagaaagtcccgtcggcg
ccaactatggtggcgcctccttagaacacagtcaaaaattgtgtgacatt
tttggaaagtcaaaaaattgctctttttggtaaatttagaataaaatcat
aaataatcatttttaggctttgaNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTTTTGATATGGTAACC
TCAAAATTCCACCAGATATGGTATCAGATATGACAGAAGGTAGAAATGTC
ACAAAACCCCCCTTTATTTTTGACTGTGTtccttagacacttactatttg
gcccctccactttcaaaattgattcgccggccctgcAGTGATTTAAATAA
CATAAAGTTACTTAAAGCTGTATTTTATGGAAGAATTCTGGATTGTTTTT
GTATGATACATTTAGCAGATAAATCACAACacacttttttcttcagattc
GAATGTACGTAGACCCGATCACCAAATGTCAGTTTCCCTATACTCCTTTT
GGACGTATCATACACACACCTCCTCTTTGTCCAAGGACGGATTGGGCAAA
TGATTTTGGGAGACCCTGGTGGAAGAATGAAAATTACTGTATTGGTGTAC
TTTCTCAAAAAACGCGAAAGATTCGAATTGTAAACACGTTAACTTCCCAA
GAACAAGTTCTAGAGGTAAcatattgtaattttttttttttttcaaatcg
taTTTGATCAAGCATTGAATCAAGTTTGCGAGTCAGATTTTAAAGAGCGG
AACACATGAAAACTGAATCTTTTTTCgactttctaaaaataaagataGTC
CACCAATAGGGCTAAAGGGTATCATTCGATGCCATCTATTGGTGTTgcat
ttttgatttgaaaaagaaCGTTTCTGCATCTTGCAGAAAGATGAAATAAT
TGTTTTGTTGATTCTGCTTTTTCAGCATAAGTTATGCGCCTCTTTTTTTT
ATATCATTAAACgtcttttttttcaagaaaattcttaacagaagaccaac
tttttcatcttttacAGGTTTGCTCGGAAGAGAATATGCGAGAAATCCAG
AACCGTTATTTTCACTACAACAAGCATGCTGGTAGTTACACTTGGAAATT
CAATGGACAAAATTTGAACATGGAAAGAACTTTACAAGAAAACAATGTAA
AAGATGAAAGTgaagatttttatgttttgggAATGGATGAAGAGCAGTAT
TTGCCAGCTCTTCACCTATATTTCAATGATGATCTGACTGAGGCTTGATT
ACGAAGTATGTACGATCTCGAAAAGCGTGAACATCTCTCATtgtaaaata
ttggtaaaataCCGTAGAACGCCTGACTGTTCTTGTTTTCTGGAAAACTT
TCCTGGCGCATTTCATTATCAGNACGCCTGACTGTTCTTGTTTTCTGGAA
AACTTTCCTGGCGCATTTCATTATCAgaattatttgtttttatcGAGCAT
AACAAACTAACAACGGCAAAAAGGCAAAGAAAGTTTATCCGTTCTTCGGT
AGAGATGGTTTTAGATTGACGGCTGACTAGTggaaatttctctttttttt
atgGGTAAATTATTCGAAACACATTTTATtgtaaaaataactttttgtaa
ATACTTCGCGATAAAAATAATATTGCTTCCATTacctttaaaaaattgaa
tatgatgtTAATACTTTACTGCGCAGGGGAGTCAATAAATTTATTGGAG Coding sequence (CDS) from alignment at sc0000436:236292..246390+ >TCONS_00022900 ID=TCONS_00022900|Name=TCONS_00022900|organism=Clytia hemisphaerica|type=CDS|length=2616bp|location=Sequence derived from alignment at sc0000436:236292..246390+ (Clytia hemisphaerica)
ATGTCAACATCAAGGCCAAAATACTTCACTCCAAATGAAGTAAGTGTTCA
CAATACACAGAAAGACATATGGGTTTCCTTTTTGGGAAAGGTGTACGATT
TGACTCCTTTGAGTGTTCAACATCAAGgtGATGTACTTTTAAAACCTATC
ATAGCAAACGGTGGTAAAGATTTATCTCATTGGTTTGACAAGAAAACTAA
AGATattcGAATGTACGTAGACCCGATCACCAAATGTCAGTTTCCCTATA
CTCCTTTTGGACGTATCATACACACACCTCCTCTTTGTCCAAGGACGGAT
TGGGCAAATGATTTTGGGAGACCCTGGTGGAAGAATGAAAATTACTGTAT
TGGTGTACTTTCTCAAAAAACGCGAAAGATTCGAATTGTAAACACGTTAA
CTTCCCAAGAACAAGTTCTAGAGGTTTGCTCGGAAGAGAATATGCGAGAA
ATCCAGAACCGTTATTTTCACTACAACAAGCATGCTGGTAGTTACACTTG
GAAATTCAATGGACAAAATTTGAACATGGAAAGAACTTTACAAGAAAACA
ATGTAAAAGATGAAAGTgaagatttttatgttttgggAATGGATGAAGAG
CAGTATTTGCCAGCTCTTCACCTATATTTCAATGATGATCTGACTGAGGC
TTGAATGTCAACATCAAGGCCAAAATACTTCACTCCAAATGAAGTAAGTG
TTCACAATACACAGAAAGACATATGGGTTTCCTTTTTGGGAAAGGTGTAC
GATTTGACTCCTTTGAGTGTTCAACATCAAGgtGATGTACTTTTAAAACC
TATCATAGCAAACGGTGGTAAAGATTTATCTCATTGGTTTGACAAGAAAA
CTAAAGATattcGAATGTACGTAGACCCGATCACCAAATGTCAGTTTCCC
TATACTCCTTTTGGACGTATCATACACACACCTCCTCTTTGTCCAAGGAC
GGATTGGGCAAATGATTTTGGGAGACCCTGGTGGAAGAATGAAAATTACT
GTATTGGTGTACTTTCTCAAAAAACGCGAAAGATTCGAATTGTAAACACG
TTAACTTCCCAAGAACAAGTTCTAGAGGTTTGCTCGGAAGAGAATATGCG
AGAAATCCAGAACCGTTATTTTCACTACAACAAGCATGCTGGTAGTTACA
CTTGGAAATTCAATGGACAAAATTTGAACATGGAAAGAACTTTACAAGAA
AACAATGTAAAAGATGAAAGTgaagatttttatgttttgggAATGGATGA
AGAGCAGTATTTGCCAGCTCTTCACCTATATTTCAATGATGATCTGACTG
AGGCTTGAATGTCAACATCAAGGCCAAAATACTTCACTCCAAATGAAGTA
AGTGTTCACAATACACAGAAAGACATATGGGTTTCCTTTTTGGGAAAGGT
GTACGATTTGACTCCTTTGAGTGTTCAACATCAAGgtGATGTACTTTTAA
AACCTATCATAGCAAACGGTGGTAAAGATTTATCTCATTGGTTTGACAAG
AAAACTAAAGATattcGAATGTACGTAGACCCGATCACCAAATGTCAGTT
TCCCTATACTCCTTTTGGACGTATCATACACACACCTCCTCTTTGTCCAA
GGACGGATTGGGCAAATGATTTTGGGAGACCCTGGTGGAAGAATGAAAAT
TACTGTATTGGTGTACTTTCTCAAAAAACGCGAAAGATTCGAATTGTAAA
CACGTTAACTTCCCAAGAACAAGTTCTAGAGGTTTGCTCGGAAGAGAATA
TGCGAGAAATCCAGAACCGTTATTTTCACTACAACAAGCATGCTGGTAGT
TACACTTGGAAATTCAATGGACAAAATTTGAACATGGAAAGAACTTTACA
AGAAAACAATGTAAAAGATGAAAGTgaagatttttatgttttgggAATGG
ATGAAGAGCAGTATTTGCCAGCTCTTCACCTATATTTCAATGATGATCTG
ACTGAGGCTTGAATGTCAACATCAAGGCCAAAATACTTCACTCCAAATGA
AGTAAGTGTTCACAATACACAGAAAGACATATGGGTTTCCTTTTTGGGAA
AGGTGTACGATTTGACTCCTTTGAGTGTTCAACATCAAGgtGATGTACTT
TTAAAACCTATCATAGCAAACGGTGGTAAAGATTTATCTCATTGGTTTGA
CAAGAAAACTAAAGATattcGAATGTACGTAGACCCGATCACCAAATGTC
AGTTTCCCTATACTCCTTTTGGACGTATCATACACACACCTCCTCTTTGT
CCAAGGACGGATTGGGCAAATGATTTTGGGAGACCCTGGTGGAAGAATGA
AAATTACTGTATTGGTGTACTTTCTCAAAAAACGCGAAAGATTCGAATTG
TAAACACGTTAACTTCCCAAGAACAAGTTCTAGAGGTTTGCTCGGAAGAG
AATATGCGAGAAATCCAGAACCGTTATTTTCACTACAACAAGCATGCTGG
TAGTTACACTTGGAAATTCAATGGACAAAATTTGAACATGGAAAGAACTT
TACAAGAAAACAATGTAAAAGATGAAAGTgaagatttttatgttttgggA
ATGGATGAAGAGCAGTATTTGCCAGCTCTTCACCTATATTTCAATGATGA
TCTGACTGAGGCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022900-exon-sc0000436-1491911889:236292..236568 | TCONS_00022900-exon-sc0000436-1491911889:236292..236568 | Clytia hemisphaerica | exon |
| TCONS_00022900-exon-sc0000436-1510915933:236292..236568 | TCONS_00022900-exon-sc0000436-1510915933:236292..236568 | Clytia hemisphaerica | exon |
| TCONS_00022900-exon-sc0000436-1575043694:236292..236568 | TCONS_00022900-exon-sc0000436-1575043694:236292..236568 | Clytia hemisphaerica | exon |
| TCONS_00022900-exon-sc0000436-1491911889:242501..242577 | TCONS_00022900-exon-sc0000436-1491911889:242501..242577 | Clytia hemisphaerica | exon |
| TCONS_00022900-exon-sc0000436-1510915933:242501..242577 | TCONS_00022900-exon-sc0000436-1510915933:242501..242577 | Clytia hemisphaerica | exon |
| TCONS_00022900-exon-sc0000436-1575043694:242501..242577 | TCONS_00022900-exon-sc0000436-1575043694:242501..242577 | Clytia hemisphaerica | exon |
| TCONS_00022900-exon-sc0000436-1491911889:245138..245356 | TCONS_00022900-exon-sc0000436-1491911889:245138..245356 | Clytia hemisphaerica | exon |
| TCONS_00022900-exon-sc0000436-1510915933:245138..245356 | TCONS_00022900-exon-sc0000436-1510915933:245138..245356 | Clytia hemisphaerica | exon |
| TCONS_00022900-exon-sc0000436-1575043694:245138..245356 | TCONS_00022900-exon-sc0000436-1575043694:245138..245356 | Clytia hemisphaerica | exon |
| TCONS_00022900-exon-sc0000436-1491911889:245709..246390 | TCONS_00022900-exon-sc0000436-1491911889:245709..246390 | Clytia hemisphaerica | exon |
| TCONS_00022900-exon-sc0000436-1510915933:245709..246390 | TCONS_00022900-exon-sc0000436-1510915933:245709..246390 | Clytia hemisphaerica | exon |
| TCONS_00022900-exon-sc0000436-1575043694:245709..246390 | TCONS_00022900-exon-sc0000436-1575043694:245709..246390 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000436 | supercontig | sc0000436:236292..246390 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001199 | Cyt_B5-like_heme/steroid-bd |
Blast
BLAST of TCONS_00022900 vs. Swiss-Prot (Human)
Match: CB5D1 (Cytochrome b5 domain-containing protein 1 OS=Homo sapiens GN=CYB5D1 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 2.066e-85 Identity = 121/210 (57.62%), Postives = 158/210 (75.24%), Query Frame = 1
Query: 169 KYFTPNEVSVHNTQKDIWVSFLGKVYDLTPLSVQHQGDVLLKPIIANGGKDLSHWFDKKTKDIRMYVDPITKCQFPYTPFGRIIHTPPLCPRTDWANDFGRPWWKNENYCIGVLSQKTRKIRIVNTLTSQEQVLEVCSEENMREIQNRYFHYNKHAGSYTWKFNGQNLNMERTLQENNVKDESEDFYVLGMDEEQYLPALHLYFNDDLTE 798
+YFTP EV+ HN +D+WVS+LG+VYDLT L+ +++G++LLKPI+ G+D+SHWFD KT+DIR ++DP+T C TP GR +H PP P +DWANDFG+PWW+ Y +G LS KTR IRI+NTLTSQE LEV E++ EI +RY YN HA SYTWK+ G+NLNM+ TL+EN ++DE E+F L MD + PA+ LYFNDDLTE
Sbjct: 18 RYFTPAEVAQHNRPEDLWVSYLGRVYDLTSLAQEYKGNLLLKPIVEVAGQDISHWFDPKTRDIRKHIDPLTGCLRYCTPRGRFVHVPPQLPCSDWANDFGKPWWQGSYYEVGRLSAKTRSIRIINTLTSQEHTLEVGVLESIWEILHRYLPYNSHAASYTWKYEGKNLNMDFTLEENGIRDEEEEFDYLSMDGTLHTPAILLYFNDDLTE 227
The following BLAST results are available for this feature:
|
