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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022877 ID=TCONS_00022877|Name=TCONS_00022877|organism=Clytia hemisphaerica|type=transcript|length=1271bp
ttttttttcttttgagttattattattattattatttttttatttttatt
ttagcctCCCAtcttctctttctctctctttATGCCTAAGCCTAAAAAAA
CAACTAACAAAAAGCGCAATATTAAAAACCCCTGTGGTATCTGTTCTAAC
CCTGTAGCAACCACTCATAGAGCTGTTTGGTGTGATAACTGTAATTCCTG
GATTCACATCAAATGTAATAACACCTCAAAATCTGAATATGAACACTTGC
AGCTAGATGACGGTACATGGCTATGCCAAAGATGTTTTAACTTGGAAGTA
CCATTTGGACGCATTTCACATGAAGATCTTAAACTCACCCTTCAAGGTAA
GAACTTTGATTTGGTCCTTGACCCTAGCAATGACATAAACCTACAATTCT
TCAAAGACATAGACTCTGCACTGAATCAAGAGGAAGTTGAAAACAATCTT
CTCAATTTTGAATGTCCTTATCTCTCTCTTAGTGAAGTAaaccaaaaaca
taaaaacaatgacTCCATTTCGGCATTACATTTAAATATCGCTTCCCTTA
AACTTCATCATGGCGAACTCAAAACAATTCTCGGCAGCTGTGATATTCCC
TTTAATTTCATTGGTATAACCGAAACAGGCTTTAAAGATGAAATTTCTGC
TCAAAGTTCTGCTGAACTTACCAACTACAATCACTTTGACTGCTGCACCA
AGTCTAACCGAGGAGGTGCTAGAATCTATGTCTCTGAAGGATTTCACTCT
ATCCCAAGATCTGACCTAGTTATCTataaggaaaatgaaattgaatctGT
AGTCAGAGAAATTGTCTatgatcaaaattttattgttgCTTGTATCTACA
AACATCCAGAAGCTGATACCACTAACTTTCAATCCCTATACTCAAATTTA
CTTGATAAAATCGtatcagaaaagaaaaaagccaTAATATTAGGTGATTT
CAATCTGGATCTATTACAAGTAGACTCTAAACCTCACATAGAAGATTTCC
TTAACAGTAACTTATCTCATTTCTTCTTTCCTACAATTACAAGACCTACC
AGGATAACTCCATACTCAAAAACACTCattgacaatattttttcaagttt
tgttaCCACTGATATGTTCTCTTGTAACCTTATCAGCTCTATATCTGACC
ATCTCCCTCAGATTCTAAAGTTAAACCTCAAACCCAAAAAAGCTCCCAAA
ATTAAGATTTCTAAAAGGGACATGAGAAATTTCAACAAAGACGATTTTGT
AATGGACTTTCTGACTCTTGA Run BLAST on NCBI transcript from alignment at sc0000435:241475..242745- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022877 ID=TCONS_00022877|Name=TCONS_00022877|organism=Clytia hemisphaerica|type=transcript|length=1271bp|location=Sequence derived from alignment at sc0000435:241475..242745- (Clytia hemisphaerica)
TTTTTTTTCTTTTGAGTTATTATTATTATTATTATTTTTTTATTTTTATT
TTAGCCTCCCATCTTCTCTTTCTCTCTCTTTATGCCTAAGCCTAAAAAAA
CAACTAACAAAAAGCGCAATATTAAAAACCCCTGTGGTATCTGTTCTAAC
CCTGTAGCAACCACTCATAGAGCTGTTTGGTGTGATAACTGTAATTCCTG
GATTCACATCAAATGTAATAACACCTCAAAATCTGAATATGAACACTTGC
AGCTAGATGACGGTACATGGCTATGCCAAAGATGTTTTAACTTGGAAGTA
CCATTTGGACGCATTTCACATGAAGATCTTAAACTCACCCTTCAAGGTAA
GAACTTTGATTTGGTCCTTGACCCTAGCAATGACATAAACCTACAATTCT
TCAAAGACATAGACTCTGCACTGAATCAAGAGGAAGTTGAAAACAATCTT
CTCAATTTTGAATGTCCTTATCTCTCTCTTAGTGAAGTAAACCAAAAACA
TAAAAACAATGACTCCATTTCGGCATTACATTTAAATATCGCTTCCCTTA
AACTTCATCATGGCGAACTCAAAACAATTCTCGGCAGCTGTGATATTCCC
TTTAATTTCATTGGTATAACCGAAACAGGCTTTAAAGATGAAATTTCTGC
TCAAAGTTCTGCTGAACTTACCAACTACAATCACTTTGACTGCTGCACCA
AGTCTAACCGAGGAGGTGCTAGAATCTATGTCTCTGAAGGATTTCACTCT
ATCCCAAGATCTGACCTAGTTATCTATAAGGAAAATGAAATTGAATCTGT
AGTCAGAGAAATTGTCTATGATCAAAATTTTATTGTTGCTTGTATCTACA
AACATCCAGAAGCTGATACCACTAACTTTCAATCCCTATACTCAAATTTA
CTTGATAAAATCGTATCAGAAAAGAAAAAAGCCATAATATTAGGTGATTT
CAATCTGGATCTATTACAAGTAGACTCTAAACCTCACATAGAAGATTTCC
TTAACAGTAACTTATCTCATTTCTTCTTTCCTACAATTACAAGACCTACC
AGGATAACTCCATACTCAAAAACACTCATTGACAATATTTTTTCAAGTTT
TGTTACCACTGATATGTTCTCTTGTAACCTTATCAGCTCTATATCTGACC
ATCTCCCTCAGATTCTAAAGTTAAACCTCAAACCCAAAAAAGCTCCCAAA
ATTAAGATTTCTAAAAGGGACATGAGAAATTTCAACAAAGACGATTTTGT
AATGGACTTTCTGACTCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022877-exon-sc0000435-1575043694:241475..242745 | TCONS_00022877-exon-sc0000435-1575043694:241475..242745 | Clytia hemisphaerica | exon |
| TCONS_00022877-exon-sc0000435-1510915933:241475..242745 | TCONS_00022877-exon-sc0000435-1510915933:241475..242745 | Clytia hemisphaerica | exon |
| TCONS_00022877-exon-sc0000435-1491911889:241475..242745 | TCONS_00022877-exon-sc0000435-1491911889:241475..242745 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000435 | supercontig | sc0000435:241475..242745 - |
Blast
The following BLAST results are available for this feature:
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