TCONS_00022867 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022867
Unique NameTCONS_00022867
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1277

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022867 ID=TCONS_00022867|Name=TCONS_00022867|organism=Clytia hemisphaerica|type=transcript|length=1277bp
GATGTTTATGAAGATTTTAATATGGTTTGGTAGAAAGTACTCAAAATGGA
ATGGAATATGCTTCCTGCAGGTGTTGTGAAAAAGATATTGAGTGGTGGCA
AAGGTGAGCTGGCTTCTTTTCCAGATGGATCAAAGGTTTGGTTCCATTTT
AGAACATTTGTGATAAAAGAGGGTGATGAAAGGCAACTTTTGGATGACAG
CAGAGTTCAGAGTGATGCATTTGAGCTTTTGATTGGAAAACAATTTAAGT
TGGATGTATGGGAGAAGTTGATTAAAACAATGCGAATCAATGAAGTTGCT
GAATTCATTTGCCAGCCAGCTTTGGTTGGAAGTTACCCTATCGTCTCTAA
AAGCCTAAGAGGTATTTGGTCCAAAGATAAAGATAAAACTGAACACAAAC
ACCAGTGTGGATTCGCAGCTCTTTCTGAAGGATTGGGCTACAGTGACTTA
GATGAGTACGTAAAGAATCCTTCTCCACTTGCCTTTCAAATTGAGCTTGT
CAAACTTGAATTGCCAGGAGAATACGAGCAAGATCTCTGGTCAATTTCTA
TAGATGAGAAAGCTAAACTCATTCCCAAATGGAAAGAGGAAGGTAATCAG
TTGTATAAAGATGGTAAGTTTGATGCAGCAAGTAAGAAATATTCAGGGGC
GTTAGGATGTTTAGAGCAGTTGTCAACAAGGGAAAAGCCAGGGAGTAATG
AATGGCAAGAAATTGAACAacagaaaattccttttttgttgaatttctct
CAATGCATGTTGAAGACAAAAGAATACTATAAAGCTATTGAACATTTAAC
CACTGTATTAGAAAAAGACTCAAAGAATGTCAAAGCTTATTTCCGTCGTG
CTTCTGCCTatcattttgtttttaactttcATAAAGCAAAACTTGACTAC
AAACAAGCAAAAGAACTGGACAAATCATTGACTAAAACTATTGACAAAGA
GCTTGCACTAATTGACAAAGATGAAGCCCAGAAAAATAAAGaggataaag
aaaaatataagaatGCATTTGCAtgatattttatttaaatttatgTATAG
TGATGAGGTAAATTTCTGTAAAGCACTAAATTCAATTTAAGACttcgatt
ttatattttatgatcATTATGCGATCTTCGATCCATTTGTTCTCAAACTT
TTATCATAttcatcaatattttattagACTTCACTTATGTGGATTTTAAC
TTTAGGgatttaaattttattgaattatCAACTATGGTAATCTgactttt
tcaaagctctatattGCTCTGATAAGC
Run BLAST on NCBI

transcript from alignment at sc0000435:143583..154614-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022867 ID=TCONS_00022867|Name=TCONS_00022867|organism=Clytia hemisphaerica|type=transcript|length=11032bp|location=Sequence derived from alignment at sc0000435:143583..154614- (Clytia hemisphaerica)
GATGTTTATGAAGATTTTAATATGGTTTGGTAAGAATATTTCTGCCTTTT
CCTGGAGTTTTTGAAATATAACATAAAACTACCAGGCAATCCAATGTCAA
CAGAACAGACTGACAGGGTGATGTCATGAACCAGATCTGGCCAGAGAGAC
GACCCCAGTCAGGACCTCATTTCACTTTATCGATATTACGCAAACGGCAG
TGTGCGCTAAATAATCTTGGTTTCGCTTTCGATTTCAAGCAAAGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGGGTAAGAGAATTTTTTCTAGAAAGGGGGAAGTTTTT
AGAAAGGGGGGGGTTCATCTAGAAAGGGGGGGGTAAGATGTCAGTGGTAT
GTTTTTTTTTTGTGTTTTCCCAAATTAAAAGTTTTATTTTTGATTTACAA
TGCAACGTCTTCTTTATTAATTGTTTAGTATGTTTGAAACATTCGATTCA
AAATGATTCTATTATTTTCGNTCACGCTTTTAGCCTGAGACGTCCTATCT
CATTTACACTGGGTGACAAATACCCCATGCAAATGCTCACCCCGTTCATT
TGCCAGGATGTGCCTGACTGTAGGATCCATCATCGGAACGGCTCGATGAC
GGATCGATGTGATCGATGGATTACTTAATGATCCGGATAGGAGATCGATA
CTCAAGATTTTTTTAAGCTTTAAGCTTAAGTTATCGATTATTTATCGATC
TTTTATCGATCTTATCGACCCTATCGACTCATACTCGATTTACGATCAAT
AACAAATCGATTAACAACGATCGATGACGAATCGATTAACGATCGATGAC
GAATCGGTATACTCGATTGAAATACTAGCTCGATAATGGATCAATGAAGG
ATCGATACTCAAGACTTTAATGGCTAAATCTTCCATCGATCTCCTATCCG
GATCGTTAAGTAATCCATCGATCACATATCGATCCGTCATCAAGCCATTC
CGATTATCGATCCTATCGAGCGCGGACGTCTGGATATAATATGCAGGTGT
AATATTCTACACTTTTGTCTAAAAATTCGTTCCAACTAAAGTCTGTTCAT
GATAAGTGTGCACTCTTTTTTCTTTTACCTATAACTTTTGAAGGAATTCT
TCAATCTTTTTAAATTTGATATTGTTGGAAAGATATTTGTGAGTGGAACA
GTTTGAAATAAAAAGGTCTTTTAAAAAATTCTAAAAACAAAGATGAAAAT
AAAGAAGAAAAAAATGAAGATCTTGTAGAAAAGTGCTATAACTTTCATTT
TCACTGGAGAGATTCTTTGATCTTAGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAAATTTTGAGGGGGGTAGCATCAAATTTT
AAAAGGGGGAAGAACCTAGGGTAGGGGGGGTAGCTCTAGGGTAGGGGGGG
TAGTGACCCCCTTCCGAACTATGGCGTACATAGAAACGGGGCTGGTTAGA
AAAATCTAAACATAGTATAGACGACCCTGGACACCGCCGTACATTGCGCG
GTGGAGTCCGGTTAGGTTAGATCAAAAACACCGTACAAAATCCCACCGTA
CACAGAATTACCACCAATCGACTACTCACCGTGTATAATGTACGGGGCGG
TATTTTTCTTGTACGGTGGGACATGTGCGGTGGAGTAGTTCAGGGTCGTG
GTCAGAGTGTAAGGTGTGATGGATAACCTCTGTTAGCCATTCCGGGTTTG
CTTGTTTTTTATTCAACGCTCATGAAAATCTTCAATTTTAGGTCCAACTT
TGACAAGCAATTGTTCTTTTTTGTAGTTGAGCTATAAAATTAATTATTTT
TGAGTAATTTAGAGTTTTCTTTAAGCTTTCCAACCATATATAATCCAGAC
GTCCGCGCTCGATAGGACAGTCAGGCACATCCTGGCAAATGAACGGGGTA
TTTTTCACTTGCGACCATTGGCAAATGAACGGGGTCGAAAATGAAAGTGA
CGTAATAGTGCCGAATACCCAGTTTAATTGAACCGGNGAAGATCTTGTAG
AAAAGTGCTATAACTTTCATTTTCACTGGAGAGATTCTTTGATCTTAGGA
GGTCATCACTGTGAAGAAATTTTACTAAAATATTTATTCACTATAAAGTT
ATGATACCAAGTTTATAAGTGATTGACCCCAAAAAACAGCAGAAAACAGC
CTTTTTAGACGTCAATCAGCTTATAACTTTGTTTGATATCTTTTGACTGA
ATGATTATTTTTGAAAAAAATCTTCACAGTGATGACGTTCGATGATCAAG
GATTAATTTCAGTGAAAATGATAGTTATAGCACTTTTCTACAAGATCTTC
ATTTTCATCTTTATTTTTAGAATTTTTTTAAATATTTTTTTATTTAAAAT
TGTTCCACTCACTAATATCTTTCCGATGATACCAAATTTATAAAGATTGA
AGAATCCCTTCAAAAGTTATAGGTAAAAGAAAAAAGAGTGCACACTTATC
GTGAATAGACTTTAATTCCATTTTTAGAAAAATTAGATCTGTGGGAAACA
AAAAAATTCACAACACTCATCTTTGATTTCAAACAGCTGCGGAGGAAAAA
AATGTGACTCCTCAAGCGATTTGGAGTACACAAAAGACCGATTGGCCCAA
AGCAGGTAAAATACCGGTCTTAAAGCGGCCGAAGTAAAATCTTTAGCGGC
CCATTGTTCGTGAAGATCGGCCTCCAAGCGGACAAGAGAATTTTTGAAAG
GTCCCTTTGAGGCCGCTCTTTTAGCGGCCCTTTTTGAGCAATAACGTCAA
TAACGTTTCACATATTAAAATCTTTCGATATGAGCCATATATGATTAAGA
TATGTTGAAAAGGTGTATCGATAGTAAAATTATCTATCTTGTATCGATAA
GGAAGAGACGCTCATGAAAATTACAAAGAAAGCGAGTTGATAAAACTAAG
CATAAAAGACGCTCGTGAAAATTACGGAGGAAGCAAGTTTATAAACTAAG
CATAGCAGACTCTTTTAAACGCTACAAAGAAATCAAATTAAGAAAACTAA
GCATGAGAGATGCTTGTGAAAGCAATGTAGAAAACAAGTTTTATATTTGT
TGACTATTCTTGTTAAAACATACGAAGAAAAACAAGTTTGTAAAAGTATG
CATAAGAAACTCTAGTGAAATTTATGAATAAAACAACTATGCTTTTGTTA
CAAATAGATCGGCTCAATAAAAGTTCTGGCTAAGAGATAGGGGTGTTCTG
TTTCTTAAAAAGTCTGTTGACGTACTTGTGCAACCTACAATGTCTTTAGA
CATTTTTGTTTGTAAAAATTCGGACACTTAAAAACACTACAATGACTTCT
AAGTTGTATCGATAAATTTTTATCGCTAATTTTCTATTGCTAATTTTGTT
ATCGTTTTCGATTAGTTTCTATCGCTAAACTTTCATGGATCATTTATTGT
TAAACTTTTATAGATAAAGCTCCTTTCACTAATTTTCAATCGCTTATTTG
GGATCATTAAATTCTTATCGATAAAAGTCTATCGATAGGCCTATGTATCG
ATAGGTGAATCGATAATTTAATCGTATCAATAAAGTGTTGAGAGTGAAAG
TGATCCTTTTCCCATGGAATGTCAAATGTCCACGAATTTCCACTTTGTCA
AAAATTTCTATCATATCAAAAAAAAATCCAAATGATTTAAAACTGCACAG
TGGGTTTGACTGACAATTCCTGCATTAATAACACGCATGCGTAAGAAAAT
CTCAGTTTCCAATTTCACAACACACGGCAACTCGTTTTCCAAGAAACGAA
CTCAATGTTTACATTTTCGAAAAATGAAGTAAGAGTAAGTATATAAGTAA
AGAAATCAATAGCGGCCATAGGGAAGAAGCGTACCGGGCATTGGACTGCT
CGGGTCCCTTTAGCGGCCTCAAAGCCTCTTCTTTATGGCCGCTTTTCATG
ATCGGCCATGCATCGGCCTCTTTCGATATTTGAACAGCCTTAGCGGTAAA
AAGACCGGTCCAATAGAGGCCAAAGAGGAACGGTCATTAGACCGATCGGA
CTTTGGTGTACTCCAAATCGCTTGGGGAGTCACAAATGTTCAGGTAGAAA
AAAGGGTCAAAGTGAAACTTTCCATATTTATCAGAAACTACCTGAGAAAT
TCAATGGTGCTAGGCTCTGAAATTAATTCTTTCATTAAAGTTATTATTTT
TTACTTTTCATATTTTGGTATATAAGCATTTTCAGCCTGAAAATGAGGAC
TAGAATTATAAGAGACTGGTACCACTGAAAGTTATTTATATGCCATGGGG
GGTTTTTCCTCTGCAGCGCTTTGATTTCAAAGATAGGTAGGCTCAGCAAT
TTTAACTTCCGCTTTATAACGTTTTTATTGCTTTTTGCAATGCAATGTCT
TCTTTTTCAAAAAAAATTTCTTTTCATTTCTTCCTTGAAGTGTTAGCAAG
CTATTACAAAAAGAGTTTGATAAAAGTATGCAGTCAAAATGAAGATATCT
GGATTTTTCTTATTGAATTTTGAAATTGGAGAACTATCAAAAAGTGTATA
TTTCGGTGCCATTTTATATGCCATTTCTGGGCTAAATGGTCAACCTCAAA
TGTCTAAAAAGGTGCTATTTTAGCGGAACATAAATCTCAGTATCTCCAGA
ACCGCTTATCATTAGGAGGTGTATGACCCCTCATTTTTGGACTTACCTCC
GGGTACCCCGTGGAGGTCCTTTAAATTAACCCATGTCCGTTCGTTTGTCC
GTCTGTTGCCAGCTTTTCTCACGGGATTGGCTCATTAGTTTTTTCTGATT
TTTTGCACAATGATGCAAAATGGCAATGCCCAAAATGTGACGGAGCCCGA
TTTTCGGAAAAAAAATATTTCTGGTCAATAATGTCGGAAATATCCCAGAA
AAACTGGTTTTTTGGCACTTTCTCGAGATTTTATTATTAGTTTTTTCAGA
TTTTTTGCTCAAAGATGCGTATTAACAATGCCCAAAACATGGCCGAGTCC
GATTTTTGAGAAAATTTTTTTCCGGCCCAAAATGCCAGAAATAAGCCAGA
AATCGCCTTTTTTCTGGATTTTCATTGGGCTTTTTCCTTATAATTGGTTG
TTTTTTTTTCATTTAAAAACATTATCAATAGAAATGCCCACCATCAAGCA
TGTTTTAATTTTTAATAAAATTGATTTTTGAAGCCAGAACTATTCAAAAA
TCGCCGGAACAACCTATTTTCGCTGAAAAGACAGTATTTCTTGAATTTCT
TCAGCTGTACTTTATATTTTTTATGAAATTTTGCACACTGATGCAAGATG
ACAATACTTAAAATGTGAAATGTGACAGAGCCCGATTTTCGAAAAAACGT
TTTTTTCCGGCCGAAAATGCCGGAAATGTGCCGGTTTTTTGACATTTTCT
CGAATTTTCATCCTTATTTTTCTCTGATTTTTTGCAGAATGATGCGAATT
CGCAATGCTCAAAACATGACTGAGTTCGATTTTTGAGAAAATGCTTTTTA
CGACCAAAAAAGCCGGAAATTTCCATTTTTGCATATTTTCATTGGATTTT
TTTCGTTTAATGGCTTTGTTTTTTTTCAAACAAAAACATCATTTATAAGA
ATGTTCACGATTAAGCATGGTTCAATTTTCAATGAAACTGGTTTTGGGAC
AGGAACTTTCTAAAAATTGCCAGAACAGCCGAGAATCGCCGAATAACATG
AATTTCTCGAGTTGCTCTCGTATTATTCTGCATTTTCATACTATTGTTCT
AATTTTTCAATTGTCTTATTACGTCAATCTTCAGGTAGGTCCATTCAGAC
GCCTGATTGCAGAACAAACAACGTTGCAGCTCGTTTTATTGCATCATCAA
TTTTAGTTTTTCCCTATCAATCAACACACCAATTTCGTCGTGTCAATTCA
AGACAGCCTTAAGTCCATTTTTCCATTTTGAGATAATTGACTTTAAAGGT
TGGGATGTGTTGGCTACACATTTCATGTCAATGCTTCATAGAAAATGAAA
TTTGCACTAAAATTTAGGACTTTAAGGCTGTTTATGGTTGATATATTATG
GAACATTCTAAATTCTTATTTTTTTTGAATTGCAAAATACACCTCTTTCC
CATTAGAATTCTGTGAACTTAAGGCCATTTTTGGAAAACGTGCATGCTGA
AATAGGGGGTTATGGTCTTAAGTCAATTTTCGAAAAAATGGACTAGTAAT
AGTAAGATTGCATGAGTACGAACAGACTTTTTAAGAAAACGAACACCCCT
GTCTTTTAGCCACAACTTTTGTTGAGCTGAATTTGCTTTCTTTGAAGCGT
TTAAATGGGTCTCTCATGTTTAGTTTTCACGAGTGTCTCTTATGCTTAGT
TTTATCAACTGGCTTTCTTTTTTACTTTTACAAACGTCTCATGACCAATT
GCATCGATATACAACCATATCATTTTTAGCGATAGAATTTATTGATAGGA
TTTTTTAACAATAAAACTTTATCAAGAAAGAACTTTCCAACAATATATTT
CATAGAACTTTCTTATCAATACAAGCTAGCCTATCAATGAAAAATCTGCA
GTTATTGATAAAATAAATCAAGCTATGGATAATTTTACTATCAATACACC
TTTCCAACTATAATTATACATATCTGCCCCTTTCTGACAAAAGGAAGTAA
CCCACATTTTTATGAATTTTGACTTGTTGACTGAAATGGCTTCTTTGGGT
CAAAACTTAACTTTTTTGGCTTAGAAAAAAATTTTTTGAGTTGCCAATCT
GGAAAAAAAATTTTGAATAAAGAAGTAACTGACAGTTTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGGAAAAAAATTTTTGAATAAAGAAGTAACTGACAGTTT
TCTGGAGAATGTTTTCTGACAAAAAGAAGTAAATGACTGTTTTGCTTCTT
TTTGTCAGAAAAGGTATCACTTACTTCTTTTTGTCAGAAATATTCTTCAA
AAAAGTGGTCAGTTACTTCTTTCTTCAATTTCTTTTGGTTGAGGTTTACT
GACAAAACAAGGGTCTTGTTTTTCTCTGCAACAGTGAACATTGCGAGAAA
AGCAGTGATGCTCAAAACTAATCTTCAATGAGTAGAACAATAATCAGTCA
TTTGTTTTTTGATATGTACTATCTGCATTCGATGCCAGCATAAAACGTGT
TTGGTCTATTTTCTCAATTTTGACTTCATGTGGGTTACTTCTTTTTGTCA
GAAAGGGGCAGATATATGGCTCATAACGAAAGATTTTAAAATGCCAAACC
TTTATTAATGTCTCCTCAATTCTGTTTTTTAAGATTGTACTTTTGAGGAT
TGAGTAGTTTTTTAGAATCAGACTTTTTTGGACCGGACTTTTGATCACTC
CAGACGCCGCTTGGAAGTCTCTTGCTCAAGAAAGGGCCGCTAAAGGAGCG
GCCTCAAACCAACCTTTCTCTCCCCCGCCCGGAGGCCGATCTAAAAAAAA
TTACTTTGGCCGCTTTAAGGCCAGGGGTAACGCTTTGGGCTGGTCGGTCT
TTTGTGTACTCCAAATCGCTTGAGGAGTCACAAATTGTGTTCACTCATAA
TGTACCACCGTAACTTGTTCTAATGTCGCAGAATGTAGACTTCCCTTGTC
TAATTCCAAAACTCTTTTTTAGAGAGCTGAAAATAATAGAAAGGTGGAAA
CTTTTTTTCTTTGCTTAGTGGTCAGAAGTAAAAAATCCTTTTCAATCAGC
AATTCCATCTTTCATATTACACCTATCTCTTAACCCTATTCGGCCTAGGG
GGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCAAAAAGACCCACTAGATCAAAAGTTAAGGGGTGGTACAGGAAA
AGCCCCCCCCCCCTAGTTCTGAACCGCCCCTAAAAGCCTAGGTTGAATAG
GGTTAAGAAGGGTGTCGGGATGTTGATATTAGACCAACTTATGGTATTGA
CAGCTTTTGGCATTTCAGTCGATTTTGATCTTCATTTCCAATACACCTAT
AACAAGTGTGCATGTTTTTATTGTGTTTGCTGCTTCAATTGGTAGATCTT
GGGTGTTTTTGGTTGCAATTATAATATTATAATATTTCCTTATTCAACGC
GTACTAAGAATGTCAGTGAAAAATGTACACAAATGTACAAATTTTTACCA
TTTTTCATGTAAAATTCGAAAAATCCCTAGGAAAATGAAAAAATGTGAAA
GAAATGTGGCAAAACTGCAAAAATTAAATCATGCAAAAAACAAATCTTGC
AAAATGCAATTTGCTGGAACTTTTTAACAATCAGGAAAATCAGTTTCTAA
AAAATTATTCAAAATTAGTTCCCTTGATAAGGTAATGTGATTTTTTGCAT
CTTTATATTTCAAGGTAGAAAGTACTCAAAATGGAATGGAATATGCTTCC
TGCAGGTGTTGTGAAAAAAATATTGAGTGGTGGCCAAGGTGAGCTGANAA
ATGGAATGGAATATGCTTCCAGCAGGTGTTGTGAAAAAGATATTGAGTGG
TGGCAAAGGTGAGCTGGCTTCTTTTCCAGATGGATCAAAGGTTTGGTTCC
ATTTTAGAACATTTGTGATAAAAGAGGGTGATGAAAGGCAACTTTTGGAT
GACAGCAGAGTTCAGAGTGATGCATTTGAGCTTTTGATTGGAAAACAATT
TAAGTTGGATGTATGGGAGAAGTTGATTAAAACAATGCGAATCAATGAAG
TTGCTGAATTCATTTGCCAGCCAGCTTTGGTTGGAAGTTACCCTATCGTC
TCTAAAAGCCTAAGAGGTATTTGGTCCAAAGATAAAGATAAAACTGAACA
CAAACACCAGTGTGGATTCGCAGCTCTTTCTGAAGGATTGGGCTACAGTG
ACTTAGATGAGTACGTAAAGAATCCTTCTCCACTTGCCTTTCAAATTGAG
CTTGTCAAACTTGAATTGCCAGGAGAATACGAGCAAGATCTCTGGTCAAT
TTCTATAGATGAGAAAGCTAAACTCATTCCCAAATGGAAAGAGGAAGGTA
ATCAGTTGTATAAAGATGGTAAGTTTGATGCAGCAAGTAAGAAATATTCA
GGGGCGTTAGGATGTTTAGAGCAGTTGTCAACAAGGGAAAAGCCAGGGAG
TAATGAATGGCAAGAAATTGAACAACAGAAAATTCCTTTTTTGTTGAATT
TCTCTCAATGCATGTTGAAGACAAAAGAATACTATAAAGCTATTGAACAT
TTAACCACTGTATTAGAAAAAGACTCAAAGAATGTCAAAGCTTATTTCCG
TCGTGCTTCTGCCTATCATTTTGTTTTTAACTTTCATAAAGCAAAACTTG
ACTACAAACAAGCAAAAGAACTGGACAAATCATTGACTAAAACTATTGAC
AAAGAGCTTGCACTAATTGACAAAGATGAAGCCCAGAAAAATAAAGAGGA
TAAAGAAAAATATAAGAATGCATTTGCATGATATTTTATTTAAATTTATG
TATAGTGATGAGGTAAATTTCTGTAAAGCACTAAATTCAATTTAAGACTT
CGATTTTATATTTTATGATCATTATGCGATCTTCGATCCATTTGTTCTCA
AACTTTTATCATATTCATCAATATTTTATTAGACTTCACTTATGTGGATT
TTAACTTTAGGGATTTAAATTTTATTGAATTATCAACTATGGTAATCTGA
CTTTTTCAAAGCTCTATATTGCTCTGATAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012852XLOC_012852Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022867-exon-sc0000435-1575043694:154586..154614TCONS_00022867-exon-sc0000435-1575043694:154586..154614Clytia hemisphaericaexon
TCONS_00022867-exon-sc0000435-1575043694:144860..144900TCONS_00022867-exon-sc0000435-1575043694:144860..144900Clytia hemisphaericaexon
TCONS_00022867-exon-sc0000435-1575043694:143583..144789TCONS_00022867-exon-sc0000435-1575043694:143583..144789Clytia hemisphaericaexon
TCONS_00022867-exon-sc0000435-1510915933:154586..154614TCONS_00022867-exon-sc0000435-1510915933:154586..154614Clytia hemisphaericaexon
TCONS_00022867-exon-sc0000435-1510915933:144860..144900TCONS_00022867-exon-sc0000435-1510915933:144860..144900Clytia hemisphaericaexon
TCONS_00022867-exon-sc0000435-1510915933:143583..144789TCONS_00022867-exon-sc0000435-1510915933:143583..144789Clytia hemisphaericaexon
TCONS_00022867-exon-sc0000435-1491911889:154586..154614TCONS_00022867-exon-sc0000435-1491911889:154586..154614Clytia hemisphaericaexon
TCONS_00022867-exon-sc0000435-1491911889:144860..144900TCONS_00022867-exon-sc0000435-1491911889:144860..144900Clytia hemisphaericaexon
TCONS_00022867-exon-sc0000435-1491911889:143583..144789TCONS_00022867-exon-sc0000435-1491911889:143583..144789Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000435supercontigsc0000435:143583..154614 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.52177	4.45559	0.0620279	1.98703	21.8912	0.200475	11.657	6.74147	9.57794	12.4935	1.44344	4.99057	5.5071	5.46048	5.11777	6.3628	7.77159	6.61798	2.69954	4.29021	8.43152	4.55696	5.26623	18.7348	5.02089	1.09583	6.16209	2.11173	12.9018	17.5367
Blast
[Close]
BLAST of TCONS_00022867 vs. Swiss-Prot (Human)
Match: AIP (AH receptor-interacting protein OS=Homo sapiens GN=AIP PE=1 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 1.358e-92
Identity = 138/321 (42.99%), Postives = 211/321 (65.73%), Query Frame = 1 
Query:   70 GVVKKILSGGKGELASFPDGSKVWFHFRTFVIKEGDERQLLDDSRVQSDAFELLIGKQFKLDVWEKLIKTMRINEVAEFICQPALVGSYPIVSKSLRGIWSKDKDKTE-HKHQCGFAALSE--GLGYSDLDEYVKNPSPLAFQIELVKLELPGEYEQDLWSISIDEKAKLIPKWKEEGNQLYKDGKFDAASKKYSGALGCLEQLSTREKPGSNEWQEIEQQKIPFLLNFSQCMLKTKEYYKAIEHLTTVLEKDSKNVKAYFRRASAYHFVFNFHKAKLDYKQAKELDKSLTKTIDKELALIDKDEAQKNKEDKEKYKNAFA 1023
            G+ K+++  G+GEL  F DG+K  FH+RT  +   DE  +LDDSR +    EL+IGK+FKL VWE ++ TMR  E+A+F+C    V  YP+V+KSLR I +  KD  E  +H CG A + E   LG++DLD   +NP PL F +E++K+E PG Y+QD W+++ +EKAK +P   +EGN+LY++G    A+ KY  A+ CL+ L  +E+PGS EW +++QQ  P LLN+ QC L  +EYY+ ++H +++L K   NVKAYF+R  A+  V+N  +A+ D+ +  ELD +L   + +EL  ++    QK++EDK +++  F+
Sbjct:   12 GIQKRVIQEGRGELPDFQDGTKATFHYRT--LHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIAQFLCDIKHVVLYPLVAKSLRNI-AVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGTYQQDPWAMTDEEKAKAVPLIHQEGNRLYREGHVKEAAAKYYDAIACLKNLQMKEQPGSPEWIQLDQQITPLLLNYCQCKLVVEEYYEVLDHCSSILNKYDDNVKAYFKRGKAHAAVWNAQEAQADFAKVLELDPALAPVVSRELQALEARIRQKDEEDKARFRGIFS 329
The following BLAST results are available for this feature:
BLAST of TCONS_00022867 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AIP1.358e-9242.99AH receptor-interacting protein OS=Homo sapiens GN... [more]
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