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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022859 ID=TCONS_00022859|Name=TCONS_00022859|organism=Clytia hemisphaerica|type=transcript|length=1487bp
attcatctatataaaaattcttgataaataaataagaaaattcttTAATA
GTATACTGGCTAAACACTGTGCCATCGCTTATTATTTTAAAGAGTACCCT
TGTCTCTTAATCGGCTTTGAGCAATCGACCTCAACTTTTCGAGTTGATAT
ATGTAAGAGATTAAAGCTATGAATCACTGTGTGCAAGTATAAAACCAAGT
GCTGTGCTTTTATAAATGCCATTAGCATTTTTGCATTCTTTCGATGCGGA
CGGGCTCTATTAATCGATAttgtttgttgaaaaaaaacGTCCTTAGTTTT
TCCTCTCTCATTTGATCACGAAGTTGTTGTCGACAAGGCAGTCTGTAGTA
CCTCTTGACTAATGATAAACTAGACcgaacttttgaagaatttgtttttg
attAGCTGGATAGCTCGCTGTTGTAATTCAAGTGTTGTGTATTTGTTTAT
TCGAATTGAACTTAAAATGGAGACATTATCAAGACTATCAGATACCATTT
TCCATTCCATCATGGACCGTCGCTTGAATATTGTCATCTATTTGGCTGTC
ATCTTCTTATTTTGTCAAGCACAAGTGCACACGACGTCTAAAAGCCAATG
CGTAAAGCATCGTAAATATATCGACGTAAAAGAAATCGATGAACATTTTC
ACGTACCTTCAAAACACATATGCGCAACAAGAATAGACTACTGCGCTGGA
CTATGTCATTCTGTAGACCAATTGCTTAGAGGAGATGGTGATTTACAAAC
TAAATGTGAATGTTGTCAACCGATCactttagaagaaaaaaaagacactA
TTGTATATTGTGTGAATCGCAAatccaaatcaaaatatttagcCTCCAAA
ACAGTTAAAGTACCTGTTATCAAATCATGTGGTTGCACGCCGTGTCTATC
TTTGAGAACGTCgtgattttcaaccgttacttGACTTTTTGAACGTGGTC
CGAAGGAGAtggattttgtttattttggatttttgtggTCCATACATGTG
GATGTGGACTATCTTAACACACTCTtgtgttttaaagattttattttgga
ATATGATAACAACCTTGTAAATGAACTACGCGACCGCGTTTGCCGTTGGG
CGGAAAATTCTTCTTCCGCTGGTATGGAAGATTCGCCCCAAGTTTCAGGC
GGTTTTTTCATCAAGTGCGGGGCGGGCGGTGTTATTCTTCCAACCAATTC
AAAAACTATTCATTTGACAGTGTTTTCCAACTAAATACAcactttgaaaa
aagtttggTGATTTGCTACTGGAAATCTTATTCTTTTGTGTAAATTTTGA
AGAATTAttctttataaataaaaatagttatttattattttttttgcggt
tttatttatatattttaaaagaagaatactttttatttgaagaaattcag
taacaacaacaacaaacatcaataacaacaattttatgagaaaaaaagca
ttaaaaatgaacaaaaataaagaaacttgGATGTGTC Run BLAST on NCBI transcript from alignment at sc0000435:78703..81013- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022859 ID=TCONS_00022859|Name=TCONS_00022859|organism=Clytia hemisphaerica|type=transcript|length=2311bp|location=Sequence derived from alignment at sc0000435:78703..81013- (Clytia hemisphaerica)
ATTCATCTATATAAAAATTCTTGATAAATAAATAAGAAAATTCTTTAATA
GTATACTGGCTAAACACTGTGCCATCGCTTATTATTTTAAAGAGTACCCT
TGTCTCTTAATCGGCTTTGAGCAATCGACCTCAACTTTTCGAGTTGATAT
ATGTAAGAGATTAAAGCTATGAATCACTGTGTGCAAGTATAAAACCAAGT
GCTGTGCTTTTATAAATGCCATTAGCATTTTTGCATTCTTTCGATGCGGA
CGGGCTCTATTAATCGATATTGTTTGTTGAAAAAAAACGTCCTTAGTTTT
TCCTCTCTCATTTGATCACGAAGTTGTTGTCGACAAGGCAGTCTGTAGTA
CCTCTTGACTAATGATAAACTAGACCGAACTTTTGAAGAATTTGTTTTTG
ATTAGCTGGATAGCTCGCTGTTGTAATTCAAGTGTTGTGTATTTGTTTAT
TCGAATTGAACTTAAAATGGAGACATTATCAAGACTATCAGGTAATATGT
CATATCATATCGATATCAACTGTGCTATTTTTCACGATATCGCAAAATAA
TAAATACTTTTGCGGTTTTTTTTCTTCCTATTCGAGGAGGCGTTGATGAT
CTTTATTAGATTTTTGCGCCCGGAAATGTTTATTTAGTCCCTATGGTGGT
CTTTTTCTTTTAGTTTTAGGGTCTCAATATCCATCTTTCTATGTTATCAC
CCCTAAAAAAATCGGCCTTATCACCTAATGCACCCTACCGTACCAAATAA
ACATCGGATTGAATGAAAACAGTATTGTGAGACTTCGTCAAACATTGGAC
AAAATAATAATGAGATAGCCAACATCATTTTTAATATAAAAAACACATAG
ATTCATTTCAGTTTGAAAGGGTTCCTTTTTTTCATTCGTGAAAATTAAAT
TATGATGATAAATGGTTTTGCGCTCAGTTCCCTTTACATGAAATTAAGCA
AAGGAAATGATCGTTCTTAGGGACTGTATTAATAATTGAACAGAACAGAG
CTGTCTTTAACAATTTATGTCGCAATTCGAGTCATATATAAGTACTGGAA
ATTTTTGCACTTAGCATTGGAGGGAAAATTTCCCGTTTTTTATTGAGAGA
GTTTCGATTTCCTTTTGAAGTTTGTGTATCGTGTGTGTAAAAATTCAAAA
TGGCCACTTTTGACATGACATCCCTTTACGGTGAGACACCCTTTGGGAAT
AAAACAATTTTTTAATTATCTCGGCTTATCCTTATTTAAATACAATTTTC
TTTGTAATTTCCTTTACACGAAAAAAATCATGTATATAATTTTCTCGTAT
TATTTGTTTTTCTAGATACCATTTTCCATTCCATCATGGACCGTCGCTTG
AATATTGTCATCTATTTGGCTGTCATCTTCTTATTTTGTCAAGCACAAGT
GCACACGACGTCTAAAAGCCAATGCGTAAAGCATCGTAAATATATCGACG
TAAAAGAAATCGATGAACATTTTCACGTACCTTCAAAACACATATGCGCA
ACAAGAATAGACTACTGCGCTGGACTATGTCATTCTGTAGACCAATTGCT
TAGAGGAGATGGTGATTTACAAACTAAATGTGAATGTTGTCAACCGATCA
CTTTAGAAGAAAAAAAAGACACTATTGTATATTGTGTGAATCGCAAATCC
AAATCAAAATATTTAGCCTCCAAAACAGTTAAAGTACCTGTTATCAAATC
ATGTGGTTGCACGCCGTGTCTATCTTTGAGAACGTCGTGATTTTCAACCG
TTACTTGACTTTTTGAACGTGGTCCGAAGGAGATGGATTTTGTTTATTTT
GGATTTTTGTGGTCCATACATGTGGATGTGGACTATCTTAACACACTCTT
GTGTTTTAAAGATTTTATTTTGGAATATGATAACAACCTTGTAAATGAAC
TACGCGACCGCGTTTGCCGTTGGGCGGAAAATTCTTCTTCCGCTGGTATG
GAAGATTCGCCCCAAGTTTCAGGCGGTTTTTTCATCAAGTGCGGGGCGGG
CGGTGTTATTCTTCCAACCAATTCAAAAACTATTCATTTGACAGTGTTTT
CCAACTAAATACACACTTTGAAAAAAGTTTGGTGATTTGCTACTGGAAAT
CTTATTCTTTTGTGTAAATTTTGAAGAATTATTCTTTATAAATAAAAATA
GTTATTTATTATTTTTTTTGCGGTTTTATTTATATATTTTAAAAGAAGAA
TACTTTTTATTTGAAGAAATTCAGTAACAACAACAACAAACATCAATAAC
AACAATTTTATGAGAAAAAAAGCATTAAAAATGAACAAAAATAAAGAAAC
TTGGATGTGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022859-exon-sc0000435-1575043694:80523..81013 | TCONS_00022859-exon-sc0000435-1575043694:80523..81013 | Clytia hemisphaerica | exon |
| TCONS_00022859-exon-sc0000435-1575043694:78703..79698 | TCONS_00022859-exon-sc0000435-1575043694:78703..79698 | Clytia hemisphaerica | exon |
| TCONS_00022859-exon-sc0000435-1510915933:80523..81013 | TCONS_00022859-exon-sc0000435-1510915933:80523..81013 | Clytia hemisphaerica | exon |
| TCONS_00022859-exon-sc0000435-1510915933:78703..79698 | TCONS_00022859-exon-sc0000435-1510915933:78703..79698 | Clytia hemisphaerica | exon |
| TCONS_00022859-exon-sc0000435-1491911889:80523..81013 | TCONS_00022859-exon-sc0000435-1491911889:80523..81013 | Clytia hemisphaerica | exon |
| TCONS_00022859-exon-sc0000435-1491911889:78703..79698 | TCONS_00022859-exon-sc0000435-1491911889:78703..79698 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000435 | supercontig | sc0000435:78703..81013 - |
Blast
The following BLAST results are available for this feature:
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