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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022858 ID=TCONS_00022858|Name=TCONS_00022858|organism=Clytia hemisphaerica|type=transcript|length=1197bp
TAATAATTGAACAGAACAGAGCTGTCTTTAACAATTTATGTCGCAATTCG
AGTCATATATAAGTACTGGAAATTTTTGCACTTAGCATTGGAGGGAAAAT
TTCCCGTTTTTTATTGAGAGAGTTTCGATTTCCTTTTGAAGTTTGTGTAT
CGTGtgtgtaaaaattcaaaatggccaCTTTTGACATGACATCCCTTTAC
GATACCATTTTCCATTCCATCATGGACCGTCGCTTGAATATTGTCATCTA
TTTGGCTGTCATCTTCTTATTTTGTCAAGCACAAGTGCACACGACGTCTA
AAAGCCAATGCGTAAAGCATCGTAAATATATCGACGTAAAAGAAATCGAT
GAACATTTTCACGTACCTTCAAAACACATATGCGCAACAAGAATAGACTA
CTGCGCTGGACTATGTCATTCTGTAGACCAATTGCTTAGAGGAGATGGTG
ATTTACAAACTAAATGTGAATGTTGTCAACCGATCactttagaagaaaaa
aaagacactATTGTATATTGTGTGAATCGCAAatccaaatcaaaatattt
agcCTCCAAAACAGTTAAAGTACCTGTTATCAAATCATGTGGTTGCACGC
CGTGTCTATCTTTGAGAACGTCgtgattttcaaccgttacttGACTTTTT
GAACGTGGTCCGAAGGAGAtggattttgtttattttggatttttgtggTC
CATACATGTGGATGTGGACTATCTTAACACACTCTtgtgttttaaagatt
ttattttggaATATGATAACAACCTTGTAAATGAACTACGCGACCGCGTT
TGCCGTTGGGCGGAAAATTCTTCTTCCGCTGGTATGGAAGATTCGCCCCA
AGTTTCAGGCGGTTTTTTCATCAAGTGCGGGGCGGGCGGTGTTATTCTTC
CAACCAATTCAAAAACTATTCATTTGACAGTGTTTTCCAACTAAATACAc
actttgaaaaaagtttggTGATTTGCTACTGGAAATCTTATTCTTTTGTG
TAAATTTTGAAGAATTAttctttataaataaaaatagttatttattattt
tttttgcggttttatttatatattttaaaagaagaatactttttatttga
agaaattcagtaacaacaacaacaaacatcaataacaacaattttatgag
aaaaaaagcattaaaaatgaacaaaaataaagaaacttgGATGTGTC Run BLAST on NCBI transcript from alignment at sc0000435:78703..80034- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022858 ID=TCONS_00022858|Name=TCONS_00022858|organism=Clytia hemisphaerica|type=transcript|length=1332bp|location=Sequence derived from alignment at sc0000435:78703..80034- (Clytia hemisphaerica)
TAATAATTGAACAGAACAGAGCTGTCTTTAACAATTTATGTCGCAATTCG
AGTCATATATAAGTACTGGAAATTTTTGCACTTAGCATTGGAGGGAAAAT
TTCCCGTTTTTTATTGAGAGAGTTTCGATTTCCTTTTGAAGTTTGTGTAT
CGTGTGTGTAAAAATTCAAAATGGCCACTTTTGACATGACATCCCTTTAC
GGTGAGACACCCTTTGGGAATAAAACAATTTTTTAATTATCTCGGCTTAT
CCTTATTTAAATACAATTTTCTTTGTAATTTCCTTTACACGAAAAAAATC
ATGTATATAATTTTCTCGTATTATTTGTTTTTCTAGATACCATTTTCCAT
TCCATCATGGACCGTCGCTTGAATATTGTCATCTATTTGGCTGTCATCTT
CTTATTTTGTCAAGCACAAGTGCACACGACGTCTAAAAGCCAATGCGTAA
AGCATCGTAAATATATCGACGTAAAAGAAATCGATGAACATTTTCACGTA
CCTTCAAAACACATATGCGCAACAAGAATAGACTACTGCGCTGGACTATG
TCATTCTGTAGACCAATTGCTTAGAGGAGATGGTGATTTACAAACTAAAT
GTGAATGTTGTCAACCGATCACTTTAGAAGAAAAAAAAGACACTATTGTA
TATTGTGTGAATCGCAAATCCAAATCAAAATATTTAGCCTCCAAAACAGT
TAAAGTACCTGTTATCAAATCATGTGGTTGCACGCCGTGTCTATCTTTGA
GAACGTCGTGATTTTCAACCGTTACTTGACTTTTTGAACGTGGTCCGAAG
GAGATGGATTTTGTTTATTTTGGATTTTTGTGGTCCATACATGTGGATGT
GGACTATCTTAACACACTCTTGTGTTTTAAAGATTTTATTTTGGAATATG
ATAACAACCTTGTAAATGAACTACGCGACCGCGTTTGCCGTTGGGCGGAA
AATTCTTCTTCCGCTGGTATGGAAGATTCGCCCCAAGTTTCAGGCGGTTT
TTTCATCAAGTGCGGGGCGGGCGGTGTTATTCTTCCAACCAATTCAAAAA
CTATTCATTTGACAGTGTTTTCCAACTAAATACACACTTTGAAAAAAGTT
TGGTGATTTGCTACTGGAAATCTTATTCTTTTGTGTAAATTTTGAAGAAT
TATTCTTTATAAATAAAAATAGTTATTTATTATTTTTTTTGCGGTTTTAT
TTATATATTTTAAAAGAAGAATACTTTTTATTTGAAGAAATTCAGTAACA
ACAACAACAAACATCAATAACAACAATTTTATGAGAAAAAAAGCATTAAA
AATGAACAAAAATAAAGAAACTTGGATGTGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022858-exon-sc0000435-1575043694:79834..80034 | TCONS_00022858-exon-sc0000435-1575043694:79834..80034 | Clytia hemisphaerica | exon |
| TCONS_00022858-exon-sc0000435-1575043694:78703..79698 | TCONS_00022858-exon-sc0000435-1575043694:78703..79698 | Clytia hemisphaerica | exon |
| TCONS_00022858-exon-sc0000435-1510915933:79834..80034 | TCONS_00022858-exon-sc0000435-1510915933:79834..80034 | Clytia hemisphaerica | exon |
| TCONS_00022858-exon-sc0000435-1510915933:78703..79698 | TCONS_00022858-exon-sc0000435-1510915933:78703..79698 | Clytia hemisphaerica | exon |
| TCONS_00022858-exon-sc0000435-1491911889:79834..80034 | TCONS_00022858-exon-sc0000435-1491911889:79834..80034 | Clytia hemisphaerica | exon |
| TCONS_00022858-exon-sc0000435-1491911889:78703..79698 | TCONS_00022858-exon-sc0000435-1491911889:78703..79698 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000435 | supercontig | sc0000435:78703..80034 - |
Blast
The following BLAST results are available for this feature:
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