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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022848 ID=TCONS_00022848|Name=TCONS_00022848|organism=Clytia hemisphaerica|type=transcript|length=1457bp
ATGTGATAAGCGTTTGTAGATTTTATTGTGTATAATGCCAgtaaaaaagg
ttgaaagaaaCATGGgtgaaaagaagtaaaaaagtcatttaaaGTCCTTA
AAAGTCATTTCCAGtgattaaaagcaatgataagAAACAGCCTAacaaaa
tcgattttaaaccAAGCTaaaggtcatttttcaaaaccacGTTATCCCAA
AAACGAGGCACATCAAACATTTCACAAAGGTTTTCGACTTCAATTTTAAG
CTCGTCAGTAATAGGTGCTAAACCTAGTTTCAACTTCTCCTTATCAACAT
GTCGCGAAGAGAATGGTGTATCTTGCTGTGAATCGTTGGAGAAAGCATCC
TCAATATCAGGTAATTGATCCAAAGGGAGTTCCACGAATTCGAAGAAGTT
AGTAAGAACCTTCTTTGGGTTTGCAACCAAATGCTCATACTTCAGTGACT
TCATTTTAAGGTCACTTTGGAGAAGTCTCTCATAAGCCACTGCACTAAAA
ATCCAAATCAAAGCTATTTTAGCAAAATGGCTCAGATCCTCCAAGTTTAC
GCTTTCAATGCGTTGTAACGAGTCCTTCATCAGTCGATGTTTGCCGATGC
CACAGATCAACTTATGAATATGAGTTGGAAGGGGCTTCCAATCGTTTGCA
ATGAAAAGCTTTTCCCATGATCGTACAAATCCAATACCTTGACGGTACAT
GTAAACTTGTTTCATACTAGGTAAAACTTCAACCATTATATCCACTAAAA
ATAGggcataattttttaatttgataaatATACAAGTAGAATTTCTTGTA
TTTCCATGCTTAATGGTCATCAGTATCACAGATaaacaaagttttttcaa
agtttcgCGATTCTTGTTGCCGTTGTGTGATAACAATACAACGTCTGAAA
AGCCATTCGTTTCTGAAATCGACAATGCACCAGGAATGGCATCAAAGACT
TTGGTTAAAAGAGTGGATCCACAACGACCATGGTTAGCTAGATGAATAAT
CGGTATCTTGGGTACATTGACTTGTTTAGCGACAAGATGAAAGGAGTGTA
AAGGCATGGTCACCATTTTGACAGCATTTTTGTACTGGGTATCATAAACA
AATGCTTTGGTTTTATCAAAGATATCACAATCACCACAATCAACAAAAAT
GGCTTCATCATCTGTGAAAGTGTACAGAGAATAATTTTCAGCTAAAACAA
TATTTGGGTGAGAAAATTCTGTAAATAGAATCAGAAAATCGTTCTTCTTT
GAGTATGTGAATTCTTCTTTGTATCGATGGATTATTTTGTATACTGAAGC
ACTGTTCTCGTATTCATCTGTTGGTTTTTGCCATAAACTGTTGATGAAAT
TGAACAATATTTGTAGCCAGTTAAACAAGATCTTTTTGATTGCAGAAAAA
CCATTCTTGTCAAGAGCTCCCATccctttttatttgtttttaatcaaaat
actaaaa Run BLAST on NCBI transcript from alignment at sc0000435:130771..132227+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022848 ID=TCONS_00022848|Name=TCONS_00022848|organism=Clytia hemisphaerica|type=transcript|length=1457bp|location=Sequence derived from alignment at sc0000435:130771..132227+ (Clytia hemisphaerica)
ATGTGATAAGCGTTTGTAGATTTTATTGTGTATAATGCCAgtaaaaaagg
ttgaaagaaaCATGGgtgaaaagaagtaaaaaagtcatttaaaGTCCTTA
AAAGTCATTTCCAGtgattaaaagcaatgataagAAACAGCCTAacaaaa
tcgattttaaaccAAGCTaaaggtcatttttcaaaaccacGTTATCCCAA
AAACGAGGCACATCAAACATTTCACAAAGGTTTTCGACTTCAATTTTAAG
CTCGTCAGTAATAGGTGCTAAACCTAGTTTCAACTTCTCCTTATCAACAT
GTCGCGAAGAGAATGGTGTATCTTGCTGTGAATCGTTGGAGAAAGCATCC
TCAATATCAGGTAATTGATCCAAAGGGAGTTCCACGAATTCGAAGAAGTT
AGTAAGAACCTTCTTTGGGTTTGCAACCAAATGCTCATACTTCAGTGACT
TCATTTTAAGGTCACTTTGGAGAAGTCTCTCATAAGCCACTGCACTAAAA
ATCCAAATCAAAGCTATTTTAGCAAAATGGCTCAGATCCTCCAAGTTTAC
GCTTTCAATGCGTTGTAACGAGTCCTTCATCAGTCGATGTTTGCCGATGC
CACAGATCAACTTATGAATATGAGTTGGAAGGGGCTTCCAATCGTTTGCA
ATGAAAAGCTTTTCCCATGATCGTACAAATCCAATACCTTGACGGTACAT
GTAAACTTGTTTCATACTAGGTAAAACTTCAACCATTATATCCACTAAAA
ATAGggcataattttttaatttgataaatATACAAGTAGAATTTCTTGTA
TTTCCATGCTTAATGGTCATCAGTATCACAGATaaacaaagttttttcaa
agtttcgCGATTCTTGTTGCCGTTGTGTGATAACAATACAACGTCTGAAA
AGCCATTCGTTTCTGAAATCGACAATGCACCAGGAATGGCATCAAAGACT
TTGGTTAAAAGAGTGGATCCACAACGACCATGGTTAGCTAGATGAATAAT
CGGTATCTTGGGTACATTGACTTGTTTAGCGACAAGATGAAAGGAGTGTA
AAGGCATGGTCACCATTTTGACAGCATTTTTGTACTGGGTATCATAAACA
AATGCTTTGGTTTTATCAAAGATATCACAATCACCACAATCAACAAAAAT
GGCTTCATCATCTGTGAAAGTGTACAGAGAATAATTTTCAGCTAAAACAA
TATTTGGGTGAGAAAATTCTGTAAATAGAATCAGAAAATCGTTCTTCTTT
GAGTATGTGAATTCTTCTTTGTATCGATGGATTATTTTGTATACTGAAGC
ACTGTTCTCGTATTCATCTGTTGGTTTTTGCCATAAACTGTTGATGAAAT
TGAACAATATTTGTAGCCAGTTAAACAAGATCTTTTTGATTGCAGAAAAA
CCATTCTTGTCAAGAGCTCCCATccctttttatttgtttttaatcaaaat
actaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022848-exon-sc0000435-1491911889:130771..132227 | TCONS_00022848-exon-sc0000435-1491911889:130771..132227 | Clytia hemisphaerica | exon |
| TCONS_00022848-exon-sc0000435-1510915933:130771..132227 | TCONS_00022848-exon-sc0000435-1510915933:130771..132227 | Clytia hemisphaerica | exon |
| TCONS_00022848-exon-sc0000435-1575043694:130771..132227 | TCONS_00022848-exon-sc0000435-1575043694:130771..132227 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000435 | supercontig | sc0000435:130771..132227 + |
Blast
The following BLAST results are available for this feature:
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