TCONS_00022812 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022812
Unique NameTCONS_00022812
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2461

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022812 ID=TCONS_00022812|Name=TCONS_00022812|organism=Clytia hemisphaerica|type=transcript|length=2461bp
tttagagaaaaaataaaagaaatgtagCTGAAAATTGATATAACAAGCAA
TAGCATTTTTTGGGAATGTTTTGGAAACCATCACCATGCTTAGAAGACTC
TTGTTTGGTAACCCTTATGAGACAAGAACAGAAATAGAGGGAGTTGTTCA
AGAGATAGATGATAATGAAAGCGGCCACAACTTTGATGAAGTTCAAATTC
TTTCTGGACACAATGATATTGTCGACTTGATCATTAATATTGATGATCAG
AGaatcttaACCACTGGGCAAGACAAGAAAGGAATAGTCTGGGATTGCAA
GACTGGAAAGATGGTCTGTGAGCTTGTTGGTCACAAGAGAGCCATCACAG
CTGCAATTATTATCCGAAAATACTTGGATTCCATCGAAGATTTCTCTGAT
GTTATCGTAACTGCTTCCTCAGATGAAGCCATTAAGATTTGGGATGTGTT
GACAGGACGGTGCAAACGAACCATCACAGAACACAAAGGTACAGTCAAGt
gtttttctatTGGTCGAAGTGAGCCATGCGTTGTGATCACAGCTGGACAA
GACATTTGTCTGTGGGATGCTTCTTTCAATTTGCTGGCCATATTTCAAAG
GAATTCATTAGATTACATCCATAGTGCAATTTTCGTAAAGACGGATCGCA
TTGTCGTTGCAACAGATCAACCGACATTAGTTGTGTACAACGTACCCACA
TTGAACGACGATGATGACGTATCACAACAAATCACAGAATGCAAGAAACT
TTTACCACACCGTGAATCCGTCACTGCTCTGACACTAGTCTCAGATGCCA
TTTTTACGTCAGCCTCAATGGACGGCGGTATAATTATTTGGACAACGCAC
AGGCTAGTGGCAACACGCAAGTTCAACCATTACGATAATTTTATGAATAT
TACCGATCATACATACCCTTATTCTGTTCAACATTTAATGGTCGCTGAAT
CGCATTATGTACTAGCAGCAATTGGGTGTGGCTTTGCTATTTTCGATGCA
CGATTTGATGACAGCAAGAAATGCATAGCACGTGTCACAAACGCCCATCA
TTCTCAAGTCACCGCCCTGGCCTTGCTAAATAAAGGAAAGTACTTGGCCA
CTGCATCTTTGGATGGAACTGTCCGTTTGTGGTCAGGTGTTCCCCTGGat
ttagATGTGGCACAGAAAGAACAACCTATGCTGAAAAGTCTTCTTTCAAG
ATTGTTCGAGAGGAAcTTAAGTGAAGTCAAGAGATTTCCACTACCATTGC
ATTTAGTTGGTCAATGTTACGCTCATTCAAATTCTGTGAAGggAATCACA
GAATGTGGCAATGAAGGATTTGTTTCTTTTGATAACGATGGACTTGTCAT
TCTGTGGAAGGACTCTTTAAAGAAAAGGCTTGGTGACGATAAAGCTATCA
GAATGGTGCTCGAAAAACTGGGCTGGAACAAAACTAATTCATAGTTAAAT
GTTGTTTTGAACGTcgagtcttcatttttggagaaatatTGTTGGTCCat
attttgtacaattattaATCGAATGcgatatttttgtttgaaataattGC
TTCAGCTTTTTCAGCGTCCAAAATGATTTTTAATTAGTATATtatgtaat
cgtcagccgtgcaaaattactcgaatctgattggtttagaggagtgcgat
taatcgttaattgcactattaccactttttgcactcttcggcggggggac
acttttgtccccttattcttttctctcccaaatcctgtgtcagagacttt
tttactatataataaaaaacaaagacattttttttcttcaatataaaaac
gaaaagaaaaattacactgcaatgttttctttttaaacaaaaactatgat
ttactaatgattatttactgacgattaccaaACCATATAttgttgtttat
agattttctttctcacaaaactaatttcgaatgcaattaaaacgttcgat
gaaaaaagaatataagaaaaaacattaaaatcaattttgtaaaattggcg
ctgcattgaagagtgtgattaacgattaattgctctctaaaggatgcaat
taacgattaattgctctctttgaaggcgcgccaaataagaaaaaatagct
catcgtgcgattataaaTCTAATTGTTCTATGAGCTCAGTTTATGTTAAG
TTTTAAGCTACACTTTTTTATCTGCGATCAAACTCTACCTACTTGCATAG
GGTCTCTTTGCCTTGCCACACATTGGGTTGCAGAGTGAAAAAGAGAAACG
AACAGCAATGAAGCATAGATGGAAAGTAAAATGGTCCCATTCGAGGTGGG
AATGGCAAAATTTTCGCCCACCTTAGTAGGGACCgcgaaagacgggggta
aaatggCTGGAATCgaccaaaatgttgtttttaggttttagacCACCTAT
AACCATGGGATAAGTTTTAGAAGCATTCTTATCATTAAATAAATGTCCTG
TAAAAGTTTGN
Run BLAST on NCBI

transcript from alignment at sc0000434:53433..66094+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022812 ID=TCONS_00022812|Name=TCONS_00022812|organism=Clytia hemisphaerica|type=transcript|length=12662bp|location=Sequence derived from alignment at sc0000434:53433..66094+ (Clytia hemisphaerica)
tttagagaaaaaataaaagaaatgtagCTGAAAATTGATATAACAAGCAA
TAGCATTTTTTGGGAATGTTTTGGAAACCATCACCATGCTTAGAAGACTC
TTGTTTGGTAACCCTTATGAGACAAGAACAGAAATAGAGGTCAAAATTAC
TTCAATTTATCTCTTCTACCTTATTCCAAGACACTGCTTAAATCTATAGA
AGCGGAAGACAGTTTCTCCATACcgaccatttttcatttttcatcttcac
tatACCGGTCTGTAATACGGGTCCTCATTCCAAGACAGAGTTTTtaatca
aaactttgaaaatttgctcaaatttatAGAAGCTGAATACAGTTTCTCCA
TACCGACCAACCAACCAAAAATCTTtcatcagaattttttttaattggca
ATGTAAGTGATAATAGTACACAAAAGCAGTGTAGATGCATTGAGagtgct
agatctactttttCTTGAATATTCAGTGATGATGTAGCACGGTTTGACCT
GAAATTGCTTATAacattgtttcatttttcatttatagGGAGTTGTTCAA
GAGATAGATGATAATGAAAGCGGCCACAACTTTGATGAAGTTCAAATTCT
TTCTGGACACAATGATATTGTCGACTTGATCATTAATATTGATGATCAGA
GGTAATTAAAGTTTTTATTcgagtaccgtaagttggtctaatctcgacat
ccgtcttctaatttcgacacccttctttagagataggattAATATGAAAG
TTAGAATcggtgattgaaaaagaatttttcctctattaccactaagcaaa
gaaaattagtttcgacctttctattattttcagctctagaaaagggtgtc
gaatttagatgagggatgtcgacattagaccaagttatggTATAACCTTG
TATAACCACTGACCTTTCATTTCGAGtataaccactgacctttatatata
ccctggaccaagtttctcaatcccggccaagcaaaatctttgatgggagt
tttttgaaatgtgctaccctaatggcggcactactcaatagcagTGTAGA
TGCATCAAGAGTGCTAcatctactttccctcgaaaatttttgatgatgta
gcgccgttaatttttaacattgaaaTGGCTGCTTTACGGgtactaattaa
aaaaaaacgttgatcaaagatagcggatatagcttggtccaggcaTATCT
AAAGGTCAGTAGGGAGAACCAATcctaatcaatcaatcaatatacTTGTA
TTCAGACAGGCAATCTTTGGGccaactaaaatttgggccgactaaaattt
gggccaaatttataaaagtttataattaagctttctTTAACCCACTTTTC
ATATCGGTATtactttaacaaaaaatttacaaattaatctcatggttgat
tgaaattcgattgacgtttttgcttacgttaatttgtaacttcctgcgaa
cttgtaatttccctcctagcttttgtaatttccctcctagcttttgtaat
ttcccgcaaaagtaaaatttccatcgtttggaaattcatcacctttttcg
aatttcttttACTAACTTAgaagtaaatggaatactatccaattaaaact
cgattcacgtttctatgacttttttgagacctctttttaaagtttcagat
tgatttccagtgttaaattgacgtttttgaggattgttagaatttcaatc
cgaactatgagattaaccaggaatcccatgcttgttttcgtgaaattctg
gataaattaccctcggtcaaatttcgaaatgttttaaatttcccttgttg
cactcgggaaatttcaaaaaatttcaaaattgacctcgggaaatttatcc
tgaatttccctcataaccatgagattactagtacataAAATTAAGGCCAA
CTAAAATTAAAGTTAAATTACAATAAGCTTTTTGAAAGGTTGGATTCTTC
ATATCCTTTGGAATTTATTagccttaacttgtttttatcATGCTCTTATT
TTAAGTGTACAATTGTgatttattttaggctttataGCAAAACCCACTTT
ACTGTATTTACCTTTATTTTCTTAAGCTGAAGTCATCAAAAGATTAAGGA
TCTTTTTTGCATCCATccagtattcatgatatgcaccgctggagagtctt
ctgtgaacttttaaaattttccaaccaatacgtcacttaaacaatagaaa
aagtgacgtattgggtggaacaaaaaaaaaacagaaaagttgcataattt
cgtgaagtcgttaatgtggtgcatatcatgaattcattTAGAATATTAAT
TTTTGATTATGATGCTATTACACTTCGCATATGCAATTAATTTCCCACGT
tgatttttttagaatcttaACCACTGGGCAAGACAAGAAAGGAATAGTCT
GGGATTGCAAGgtgtgaatattttttaaagtgaaCTTTCTATTTAGTTGT
CACCTCTCCTCGAATTGTGATGAACAAAACTTGTCTGTTGCACCAAAAGT
AGATTGTATTATTTATTTAGGATACAATCTATTTTATAAGCACcaataaa
cattttttgagaCCTGATTGTCTTTACGATTTGGGTATTTTTGAGCCTCG
AATTGTTTTCATCATGCTCTTAATGAAATTGAGGTATCTGATGCATGAAA
TTTAGCACCATGATTTTACTTCTCTTTCCCACAATTTACTAaaaattctc
tctttttttttttttgcattctcgAACTTGATCCTTACTTTAAAAATGCT
CCTTCTGCGTAGAAGATAGATTTAAAGATAATCTTTTTGAAGATATATGG
AGGCACACCTCTTGCAAAGCGTTGACACAGCAGAATTAATGCGATGCGGA
GTGatgaaatttattctttcttttgttaaataaaatgctgtgtaagcaaa
tggtaggagataccTTAAATGATGTCCTTTAACTTCCCACTGTACGTCTA
CAGGATTAGAAAATGCATCAAGACTATTTCAACATGATAGTCTTAATTTT
TTCTAGACTGGAAAGATGGTCTGTGAGCTTGTTGGTCACAAGAGAGCCAT
CACAGCTGCAATTATTATCCGAAAATACTTGGATTCCATCGAAGATTTCT
CTGATGTTATCGTAACTGCTTCCTCAGATGAAGCCATTAAGGTGGGTTCA
CAAAATACCCTGGTGTTAACGGTGTGAAGAGGGAGGTGATCCTATGGGAA
GATGGGGGGAATCAACTTTTGCCCTGGAGGGGGAAGTGAGTATTTTCACC
TTGATGGGGGGACTAATGCAAATGGGGGATTTCAGGAAATTTTATGGGAA
GTGGGGGTAGAAAGTGTAAAGATTaggtaaaatatttcaaatagatGATT
ATGTGTCTATATTTCTAGCATTTGTGTGTTCATTGCAGGAAATTGTCATT
TTTCTTAAGTTATTATACAAAATATAGCGAATCAGTTGGTCACAAAAATA
ATCTTCCAATGGGAGAGAAGGTTTTAGGGTTTTAGGCCCCAGATGGGGGT
ACATGAAAACCTGGAGAACACAATGGACCTAGAAGGTATGCAGGTATCAT
TTTTCGTTAGGTAACGGCGCTGAGCCTCTCTCAAACAAATCTCAAAATCT
ACTTTCAAACCAATCACATGAAATACACTTCCATTCTTGTTTTTCATAGA
TTTGGGATGTGTTGACAGGACGGTGCAAACGAACCATCACAGAACACAAA
GGTACAGTCAAGGTAATTCAAATTGACATTTACTTTGATATCTTTAAAAA
GGGCAAATTTAccgttttaaaatgaaagagtacataaattttttttgcat
aaccAAACTTTGATGGGTCAATATGGTATTTAAGTTGACTTTTTCATATA
GTCTGTAAAAGTGACACCAAATCGAAGCTGTTCGTATTACTAATTATTCT
TGTTGAACTTAAGTCCAAACTGTACTCAGAATAGAACAGTAGAACCTttt
ttaattcgaacctctataactcgattatcaccttaactcgaacaatctTT
CTCGTCCCTTTAGTTAACAGTGCGCTAAGCCTTACTCccaaactcaaaat
ttccttccaaatttcaaacaaatttgtgttccccgtgcgagttcgagtta
tggagactctactgcatttcttttcagtgtttttctatTGGTCGAAGTGA
GCCATGCGTTGTGATCACAGCTGGACAAGACATTTGTCTGTGGGATGCTT
CTTTCAATTTGCTGGCCATATTTCAAAGGAATTCATTAGATTGTAAGAGT
TCTtgtcaatacaccgtttagtagtgttgactgcgcacgcgtccaaacaa
ttttccattgttttgattttagcgctCTTTCCCGtaaaaaaaacggtagg
taaaattCCGGTTCTCGTAAGGAAACctagcagagaaatggtaggtctTT
TAATCATaattcttttcctcttgatgaatttttatgaaattttcaggaga
gatccataaaattatcattgatatcatgttcaaacatctaaatcattctc
tttaaaggaaagaaaaaaattgacaatgtttacattcctttaaccttcca
cagtactaaagtgcgcatttttacctaccgtttttacGGTTGAACACGGT
GGAGATAGCGAGactactaaacggtgtattaaagAATCCGAAATCTTTGT
CTGtcaggaaagaaagaaagaaagtgtTTTCTGAATAGAAGAGTGCATTC
AATGAGAGGAGAATTCTTCGATGAATAATTTGCCTGAAATTCCATGTACA
CAAGGATACCTGGTATTTGAACAAACTAAATTCTATACCTTTGGTTTGTA
TTTGTATTCGCTGTATTGATTTGTATTTGTACGAACTTCTTTTTCTCAGA
CATCCATAGTGCAATTTTCGTAAAGACGGATCGCATTGTCGTTGCAACAG
ATCAACCGACATTAGGtataacaaatatttttcaaaataagttctctcTT
GGTGATAAACTGTTCTTGTTATGACTACAATCAAGGACATGCTTCAACAG
TGGTTTTTCAAGTTGACTAAGTTACGTACCTTCCGCCATTTTGGaagcaa
acattcgatttgtggAGGGAGTTGCTTCTACAAATTCGAACGCTTGCTTC
CAAAATGGCTATGTAACATTTTCTGAACCCAAAAAACCATTTTGATAAGA
ACCTTTTTTAtttcgattcttttttttttgatggtATTATGTGCCCACTT
TCTCAAAATGTGAAAGCTTCGAATGAATCAAATGAAAGGGTACTGGTGAC
AAGTGATCTACAAAATCTCGAATTTCATACAGTAGGTACATAAGTTTTGT
TGTAAGTAGGTAAGTGTAAGTTTTTCATCGTGTCTATCGTGTACGTTATA
GGTATATATTATATCTTAATTTATCTTTTACCGCCATTCAGTTGTGTACA
ACGTACCCACATTGAACGACGATGATGACGTATCACAACAAATCACAGAA
TGCAAGAAACTTTTACCACACCGTGAATCCGTCACTGCTCTGACACTAGT
CTCAGGTTTATATTGAATTTGTTTTTGTATAAAACATAGTTCTACATTTc
ctgctggcacacaacgttgtttcaacgttcatctaacgttatatagacgt
tgtgaacgttaaataaacgttgaaataacgttgtgtgccagctgggttct
TATTGCTTTAAGGAGATGGACCTATGATATGATATTTTCACTAATTTTAG
GCTGATTGACGAAAATTTATTCCtgcaaaatgtaaaaattttgtcAGTTA
GCTCATTCGCCCTTCGGAAGAAGAAGGAAAACAAAACACGCtcataattt
gaataaattcttgaaatttgaagaaattaCGATTAGCTTGTTACAGATCT
CGACAACTAATATCCTGCTACAAGAGAACAACAATCTTTGTTAAACTTCA
GTTGGATCCAGTAGCTTCTGAATTCATAGAAAGTGTGGACTACTACACCC
TATTAACCCttagtaccttaagggaagaaattttcgggagaagaaatttt
cgcggaatttaatttcgcaaatttgggcgtaattcgcgaaattaaattcc
gcgaaacacaccaaaatgacTNtaagggaagaaattttcgcgagaagaaa
ttttcgcggaatttaatttcgcaaatttgggcgtaattcgcgaaattaaa
ttccgcgaaacacaccaaaatgactaaatcgcgagattaaattccgcgaa
atccGACTTTTTGGAGGAAGAAGGCGGCGATCAAGTTTAATCATGACTTA
TCatagaaacattcgaatatttgattttattattttgttgttaaagtTTG
TTAATGTGACTAAAATATGTcttgaaatcgatgaaaaatatgaaaaacat
tttttctgtaaaaaaaattattttgaaatttctcaagcgcgaaattaaat
tccgtgaaactttagAAActggctcattcgcgaaattaaattccgcgaag
tATGctattttgaaactctgattcgcgaaattaaattccgcgaaaatttc
ttgcCTTAAGGCATCATGTTCTGCTTTTGAGGGGACTGctaatgaattta
caaggagAATCTTCTTAACATTCTCACGAACTAAGGGTTTTTTAATTGAA
ACAGTACTGCTTAATTTTTAGTCATAATTTCCTAACTTGATTTCTCTTGT
AGATGCCATTTTTACGTCAGCCTCAATGGACGGCGGTATAATTATTTGGA
CAACGCACAGGCTAGTGGCAACACGCAAGTTCAACCATTACGATAATTTT
ATGAATATTACCGATCATACATACCCTTATTCTGTTCAACATTTAATGGT
CGCTGAATCGGTTAGAATACTGTCGCTTTGTATTCATGATTtgcatcact
gcaatgtctttGACATCACACCATAGACCCAACGGCTGATTGGttataag
tgacgtaaaatcagtcgatatgtcacttgcaaccaatcagctgttgtgtt
cgtgatgtaatgttagaagacattgcaatggtgcataccaTGACTTTGGC
TATTGCAGGAGTAGTATCAACCCTCTTTGTTGAAAAGGTCTACCGTCCAG
GGTGatgtggaaaataaaaaaatccagggatgtctggtttcaatggtttt
tcgagtgtaaaaattCAGGGTGGTCGCCAAAActaggtcgaaaatccagg
atGTTCTggaagattgaaaaaaaaacaggggCCACCTTTTCCAAAAAAGA
CCTCAACAAAGgcgataaaaaatttttctggaatagcccattcaTTATTG
GTATTATCATTGCTTCAAGAGTGTTTGAAGATTTTCATctatttgagaaa
ttttcaatccTATGATTCACATAAAGGACACATTCCTATaaccttttttg
gacctacctccgggtaccccggtggaggtcctttaaattaacacatgtcc
gtccgttcgtccgttcgttcgtctgatGCCAGCTCTTCTCAGGATTTGCT
CATTagctttttgtgattttttgcacaatgatgcaaaatgacattACCTg
aaatgtgacggagtccgattttcgaaaaacattttttccggccgaaaatg
ccggaaatatgccggaaaaaccggttttttttatattttctcgaattttc
atccttatttttctctgattttttgcagaatgatgcgtattcgcaatgct
caaaacatgaccgagttcgatttttgagaaaatgtttttccggccaaaaa
agctggaaatttccgtttttgcagattttcattggatttttttgtttcat
gtattttcaaacaaaaacatcatttataagaatgtccacgattaagcatg
gttcaattttcaatgaaactgattttggtacaggaactttctaaaaatcg
ccagaacagcagagaatcgccggattccatgaatttctcgagttgttctc
gtattattctgcattttcatactagtgttctcatttttcaattgttttat
tacatcaatcctcaggtaggtccattcagcatgtagcttgttttctCTTA
TCAAGGTCAAATCTTCTTTTGGCATTAGTTAGCCCGGAAAACTGAGGCAT
CACATATCGAAAGTAtccttttttacaatttttttttacactaAAACTGA
TTATTTCTCTTTGATCATTTAGCATTATGTACTAGCAGCAATTGGGTGTG
GCTTTGCTATTTTCGATGCACGATTTGATGGTAAGTTTACACATATTTTA
TCAACAGTTGAAAAAgttttcgttttcattttttgtatgtATGAAATCTC
TTACTTCAAAATATGTATCTCTGTCAGCCTTCAAACTATTTGATTTGCGA
CAGTAGCCAGAAGCGATCTggaggctcctctttcgatagctatctccCAA
AAGTAGAGGAGACGCCACACTTTTTCCCAGGATTTTTCCACTTACCCTTG
TTCTCTCTCTTTAATTGTTTAGCATTAAGCAGAGAGTACCATATAGGCCA
CATAGTGTTCTCCCCCCCGAATGAGAAATATATTTTCAGGCTTCAAAGCA
GTAAATTATAGcatattttatgcattttttagGAAAACGGTGTAAAAACA
TGCCTTTTCAGAgcaataacaattttttatccaaaaatgtcaaaaaacgt
TTTAGTAAAAAAACTCATGAAAATGGAGACTGTGAGGCCTCAAAAGATTT
TTCGAAAAGGGGGGAGGGGCAAAGAAGGTTTTCAAAATCTAGGGGGATTT
AAAAGGCCCTCTAaccagaatttttcaaaatactgaaggggggggggcaa
cCAACCCACTAGCACACTATGGCTATGTGCCATCAagccttcgggtagac
agctttCGAAAGAGGAGCTATCTCTTTTTTACACCACGGATCGTTTGGAT
TTTCAATAATTTATCTTTCTTAGACAGCAAGAAATGCATAGCACGTGTCA
CAAACGCCCATCATTCTCAAGTCACCGCCTTGGCCTTGCTAAATAAAGGG
TAATGCNGGATCGTTTGGATTTTCAATAATTTATCTTTCTTAGACAGCAA
GAAATGCATAGCACGTGTCACAAACGCCCATCATTCTCAAGTCACCGCCC
TGGCCTTGCTAAATAAAGGGTAATGCAATTTTTTTAGCCTGTATCGCCCG
CCTAAAAGTGGAAATCTGCTTTAAATTTTAATCGGAGGAGAGTTTGAGTC
AAGCTATACATTGTCATTCATACTCTAGGGAAGAGACTGTTGTGAATCAA
GCTTTCGAAATATTTTGCAAGACGAAGATATCGCGATTCATCAGTTTTTC
TCGGTCTTGTCCAATATTATCATACAGATTTTTGTTAAagtcattttaaa
gaagaattcaAGACACAAGAATATTTATGGTGaatcaacttttcaaaagt
tttcgcggaattaactttcgcgaattagaCCTGGATTCgtgaaaattgta
aaagtttctctccgcgaaagtttcttcccttaaagtGATTAGTTTGGTGT
TACTTAATAAGGAAACACCTGgaaataatttctttcttaaaaaaatttac
gaagggattccttagtgtttacaaAGCTTTTGATCCAAAGGAAAAAGCAC
GTTTTGTTTTATGACATCTTTCTTTTCCATAGAAAGTACTTGGCCACTGC
ATCTTTGGATGGAACTGTCCGTTTGTGGTCAGGTGTTCCCCTGGATAAAG
GTATGCCAATCAATCTCTATCATCTCTTCATTTAGTAGGTAGTGTGTGTT
CATTCATCTGCTGGATGTCGATGGACTTTGAATAAAAACCAACGCTATAA
GTCTGTGACCGTAGaaggaggcgacccgaaggctcctctttcaatagcta
tctgcctctggattgctccacttaccttGATTCTTCTCTTAATTACTTAa
gatatcaaaaaatttttacctGATGCATCAATGTGTAATGTTCATTGATG
AAAGAGAAGAATCGAGGCTAAGTGGAACAATCCATAGGATAAAGTTGCGC
CATCCCGTATTTTCGGCTAGATGGCTGTAAACAGGAGAGCCTTTGGGTAC
TGTAGTGATCTCAAGACTTAATGACTGTTTTTACTGTAAGAGGAATATTT
CatgttcaatatttttttattttgacatttagATGTGGCACAGAAAGAAC
AACCTATGCTGAAAAGTCTTCTTTCAAGATTGTTCGAGAGGAAGTTAGTT
TAAattatattttcctttttacCCTCGCACAATCTATGTCTTGCATGTTT
CAGTTGAATAAACTATAAGTCTAACTAAAGCTTGATGAATCACCAATTTT
TACTTCAATACCTAGAGTGCCTGTAATCGGGTGATTTCTGAAGATAGTTA
AGCACAGTAGTAAATTATTTTGGTTAAAACTGGCCAATAAACTGATGCGA
cgaaaaagtttcttgtttctttttttgtacGTCCCATGATACTGTGTATT
AGttcagataaaaataaaatgttttttatgtttcagcTTAAGTGAAGTCA
AGAGATTTCCACTACCATTGCATTTAGTTGGTCAATGTTACGCTCATTCA
AATTCTGTGAAGGTATGCTGTTTGGTGATCTTCCAAAGATTTTTTCACGA
CTTTCTACATTTTCTTGAATAACCTGGAGGACTTTGGACTATAATCAAAT
TGAATGAACCAGTACAGCTAAAGAGATCCAGGTCTAATTCTATGGATTGG
AACTGTTAAAATTGGGCAATATCATTATGTCGGTGTTCCTTGATGGACAA
AAGATCCGACGAAAGTAAACGGTGTTTTTGGGTGAACTTATCCACATTTA
TATACACATTCTCAATGGTAGaggaaaaaaaaagttcaatctcaaaataa
gtgttTGAGTCTTTTTTTGCTTGCCTTACCTTTACTTTTCCTTACAAGTT
TTGAGATTGTCCCTTTTCTTGTAGTGTTGAAGGATTCTAGATCTACATGA
AGAAAAGGCAATCTCAAAAACTAAACGTTAGTAAAGTAAAAAGTTGTTTT
GCGATTAGACTTTCTACCTTGATGGCAGTGATATCTGCTCCGCCAGGGTG
GTGCAGTATTGTTGAGTCCCAATAACGGACGAAATGCATGCAGTTACTTT
GCCGCCCAACCTTCTGATAGatattctttttaaatttcttcaCATCATTA
ATATTgaataaaattcaatttttcagggAATCACAGAATGTGGCAATGAA
GGATTTGTTTCTTTTGATAACGATGGACTTGTCATTCTGTGGAAGGTGAG
AATTTTTGCACTtaacaaagattttaactgtTATCAATCACACATGTCAC
ATGGACCTGCTTGAAGCACCACGGTTTCATAGGGTTTAATATAGCAACTT
CTTTTGTCCCCGTCCCCTCGCTCACAACACTCTTTTCATATATCGTCAAC
GTTGGGGGAAGCTGCAATCTTTTCTGGAAATAAAGTTGATGTTTTATCCC
AATGTCTCCTTGAGTGTTCTCAACCTTTTTCAATGCTTTGAGAATGCAAA
AGCAATAATTgttgtattatcatataacgatGTTATTAATTTATTACACG
TAGACTTATAAACGATTCCAATCTACTACTACTATTCAAGGATGTTTCTT
CTTTCTTACAGGACTCTTTAAAGAAAAGGCTTGGTGACGATAAAGCTATC
AGAATGGTGCTCGAAAAACTGGGCTGGAACAAAACTAATTCATAGTTAAA
TGTTGTTTTGAACGTcgagtcttcatttttggagaaatatTGTTGGTCCa
tattttgtacaattattaATCGAATGcgatatttttgtttgaaataattG
CTTCAGCTTTTTCAGCGTCCAAAATGATTTTTAATTAGTATATtatgtaa
tcgtcagccgtgcaaaattactcgaatctgattggtttagaggagtgcga
ttaatcgttaattgcactattaccactttttgcactcttcggcgggggga
cacttttgtccccttattcttttctctcccaaatcctgtgtcagagactt
ttttactatataataaaaaacaaagacattttttttcttcaatataaaaa
cgaaaagaaaaattacactgcaatgttttctttttaaacaaaaactatga
tttactaatgattatttactgacgattaccaaACCATATAttgttgttta
tagattttctttctcacaaaactaatttcgaatgcaattaaaacgttcga
tgaaaaaagaatataagaaaaaacattaaaatcaattttgtaaaattggc
gctgcattgaagagtgtgattaacgattaattgctctctaaaggatgcaa
ttaacgattaattgctctctttgaaggcgcgccaaataagaaaaaatagc
tcatcgtgcgattataaaTCTAATTGTTCTATGAGCTCAGTTTATGTTAA
GTTTTAAGCTACACTTTTTTATCTGCGATCAAACTCTACCTACTTGCATA
GGGTCTCTTTGCCTTGCCACACATTGGGTTGCAGAGTGAAAAAGAGAAAC
GAACAGCAATGAAGCATAGATGGAAAGTAAAATGGTCCCATTCGAGGTGG
GAATGGCAAAATTTTCGCCCACCTTAGTAGGGACCgcgaaagacgggggt
aaaatggCTGGAATCgaccaaaatgttgtttttaggttttagacCACCTA
TAACCATGGGATAAGTTTTAGAAGCATTCTTATCATTAAATAAATGTCCT
GTAAAAGTTTGN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012821XLOC_012821Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022812-exon-sc0000434-1491911889:53433..53571TCONS_00022812-exon-sc0000434-1491911889:53433..53571Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:53433..53571TCONS_00022812-exon-sc0000434-1510915933:53433..53571Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:53433..53571TCONS_00022812-exon-sc0000434-1575043694:53433..53571Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:53971..54083TCONS_00022812-exon-sc0000434-1491911889:53971..54083Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:53971..54083TCONS_00022812-exon-sc0000434-1510915933:53971..54083Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:53971..54083TCONS_00022812-exon-sc0000434-1575043694:53971..54083Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:55795..55843TCONS_00022812-exon-sc0000434-1491911889:55795..55843Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:55795..55843TCONS_00022812-exon-sc0000434-1510915933:55795..55843Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:55795..55843TCONS_00022812-exon-sc0000434-1575043694:55795..55843Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:56439..56573TCONS_00022812-exon-sc0000434-1491911889:56439..56573Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:56439..56573TCONS_00022812-exon-sc0000434-1510915933:56439..56573Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:56439..56573TCONS_00022812-exon-sc0000434-1575043694:56439..56573Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:57082..57144TCONS_00022812-exon-sc0000434-1491911889:57082..57144Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:57082..57144TCONS_00022812-exon-sc0000434-1510915933:57082..57144Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:57082..57144TCONS_00022812-exon-sc0000434-1575043694:57082..57144Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:57560..57674TCONS_00022812-exon-sc0000434-1491911889:57560..57674Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:57560..57674TCONS_00022812-exon-sc0000434-1510915933:57560..57674Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:57560..57674TCONS_00022812-exon-sc0000434-1575043694:57560..57674Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:58282..58347TCONS_00022812-exon-sc0000434-1491911889:58282..58347Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:58282..58347TCONS_00022812-exon-sc0000434-1510915933:58282..58347Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:58282..58347TCONS_00022812-exon-sc0000434-1575043694:58282..58347Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:58824..58937TCONS_00022812-exon-sc0000434-1491911889:58824..58937Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:58824..58937TCONS_00022812-exon-sc0000434-1510915933:58824..58937Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:58824..58937TCONS_00022812-exon-sc0000434-1575043694:58824..58937Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:60085..60242TCONS_00022812-exon-sc0000434-1491911889:60085..60242Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:60085..60242TCONS_00022812-exon-sc0000434-1510915933:60085..60242Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:60085..60242TCONS_00022812-exon-sc0000434-1575043694:60085..60242Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:61555..61612TCONS_00022812-exon-sc0000434-1491911889:61555..61612Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:61555..61612TCONS_00022812-exon-sc0000434-1510915933:61555..61612Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:61555..61612TCONS_00022812-exon-sc0000434-1575043694:61555..61612Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:62426..62501TCONS_00022812-exon-sc0000434-1491911889:62426..62501Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:62426..62501TCONS_00022812-exon-sc0000434-1510915933:62426..62501Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:62426..62501TCONS_00022812-exon-sc0000434-1575043694:62426..62501Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:63015..63076TCONS_00022812-exon-sc0000434-1491911889:63015..63076Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:63015..63076TCONS_00022812-exon-sc0000434-1510915933:63015..63076Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:63015..63076TCONS_00022812-exon-sc0000434-1575043694:63015..63076Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:63509..63575TCONS_00022812-exon-sc0000434-1491911889:63509..63575Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:63509..63575TCONS_00022812-exon-sc0000434-1510915933:63509..63575Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:63509..63575TCONS_00022812-exon-sc0000434-1575043694:63509..63575Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:63869..63944TCONS_00022812-exon-sc0000434-1491911889:63869..63944Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:63869..63944TCONS_00022812-exon-sc0000434-1510915933:63869..63944Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:63869..63944TCONS_00022812-exon-sc0000434-1575043694:63869..63944Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:64559..64627TCONS_00022812-exon-sc0000434-1491911889:64559..64627Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:64559..64627TCONS_00022812-exon-sc0000434-1510915933:64559..64627Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:64559..64627TCONS_00022812-exon-sc0000434-1575043694:64559..64627Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1491911889:64994..66094TCONS_00022812-exon-sc0000434-1491911889:64994..66094Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1510915933:64994..66094TCONS_00022812-exon-sc0000434-1510915933:64994..66094Clytia hemisphaericaexon
TCONS_00022812-exon-sc0000434-1575043694:64994..66094TCONS_00022812-exon-sc0000434-1575043694:64994..66094Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000434supercontigsc0000434:53433..66094 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	8.10545e-09	0	0	1.02626e-08	1.45444e-05	0	0	1.13881e-06	0	2.19724e-07	1.428e-05	1.77968e-09	3.37043e-07	3.34302e-08	1.106e-08	0.00115175	9.71844e-05	5.61259e-07	0.00221434	0.261626	4.96197e-06	0	0	0	0	8.53549e-06	9.06027e-07	9.77253e-06	0.000212449
Blast
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BLAST of TCONS_00022812 vs. Swiss-Prot (Human)
Match: WDR41 (WD repeat-containing protein 41 OS=Homo sapiens GN=WDR41 PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 9.481e-30
Identity = 122/454 (26.87%), Postives = 219/454 (48.24%), Query Frame = 2 
Query:   86 MLRRLLFGNPYETRTEIEGVVQEIDDNESGHNFDEVQILSGHXXXXXXXXXXXXQRILTTGQDKKGIVWDCKTGKMVCELVGHKRXXXXXXXXRKYLDSIEDFSDVIVTASSDEAIKIWDVLTGRCKRTITEHKGTVKCFSIGRSEPCVVITAGQDICLWDASFNLLAIFQRNSLDYIHSAIFVKTDRIVVATDQPTLVVYNV-PTLNDDDDVSQQITECKKLLPHRESVTALTLVSDAIFTSASMDGGIIIW-TTHRLVATRKFNHYD--------NFMNITDHTYPYSVQHLMVAESHYVLAAIGCGFAIFDARFDDSKKCIARVTNAHHSQVTALALLNKGKYLATASLDGTVRLWSGVPLDLDVAQKEQPMLKSLLSRLFER----NLSEVKRFPL----------PLHLVGQCYAHSNSVKGITECGNEGFVSFDNDGLVILWKDSLKK 1375
            MLR L+ G         +  +Q I + ++ + + E+ +L  H+DIV  ++ +DD R  + G D   +VW+ +TG+ + EL GH + ITA I     L+S E+ + +I+TAS+D  + +WD  T R  + I+  + TVKC ++ +    V ++ G D+C+W+   +LL      S   I + + +  + +V A  +  ++   V PT   +  +   I E K+LL H++++ +L  V+D  F + S  G +IIW      +   + N +D          + +   +   S+ H    E + V AA+G G  ++  +    K+ IA    AH S V  +A L   + L + S DG+VR+W       ++ +K+Q   + + +  F       +S+    P+           L L+G    HS+SV+      + G V+   D L+ILWK+  ++
Sbjct:    1 MLRWLIGGGREPQGLAEKSPLQTIGEEQTQNPYTELLVLKAHHDIVRFLVQLDDYRFASAGDDGIVVVWNAQTGEKLLELNGHTQKITAIITF-PSLESCEEKNQLILTASADRTVIVWDGDTTRQVQRISCFQSTVKCLTVLQRLD-VWLSGGNDLCVWNRKLDLLCKTSHLSDTGISALVEIPKNCVVAAVGKELIIFRLVAPT---EGSLEWDILEVKRLLDHQDNILSLINVNDLSFVTGSHVGELIIWDALDWTMQAYERNFWDPSPQLDTQQEIKLCQKSNDISIHHFTCDEEN-VFAAVGRGLYVYSLQM---KRVIACQKTAHDSNVLHVARL-PNRQLISCSEDGSVRIW-------ELREKQQLAAEPVPTGFFNMWGFGRVSKQASQPVKKQQENATSCSLELIGDLIGHSSSVEMFLYFEDHGLVTCSADHLIILWKNGERE 437
The following BLAST results are available for this feature:
BLAST of TCONS_00022812 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR419.481e-3026.87WD repeat-containing protein 41 OS=Homo sapiens GN... [more]
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