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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022808 ID=TCONS_00022808|Name=TCONS_00022808|organism=Clytia hemisphaerica|type=transcript|length=1412bp
AAAAGATAATGCTCGTTAATTGTTGTATATGGGATTTACTGCGATAAAAT
CTTTTTCGCGAACTCACGACGAAGGGGATAAAGAGTAATTGGCGAAATAA
AAAATTCAGTACAGATAATCCATTTGTCCATCTGATGAATATAAAAAGTT
AAAGTTGTttcataaaataataaataacaCTCAAAACGTACCAAACATTA
TACAAAACCATAATGGATATAAATGACCTTCTATTTATTTACATCATTTT
GTACATGTATCAAAGCTAGGTATGatttaaaatattcttcaaattaTATT
AGGAATAAATATTCTCAACCCCCTTTTACCCTCTTGACCAGACGCGTGta
ctttttccaaaaacattCACTTagggggatacttaggcaaaattaggTAC
GGGGGACGTGCCGTTGATCAAGGTCCCTTTTCTAGGCTATttgatatctg
acagggtccaaaaTttactaattttcaagatgtggaCCTGCTGACAGGGT
CAATTTTTGGTcgttttggacaTTTAAATCCTTTATGCTACTTTTCAGGG
TTAAAGTGGGcaaatttttcgttctgaaaaagtccaaaatttaaaaaaca
ttcatatctgacagggtccacgtttcaaactccagcggcacatccccgtc
agccgtcaaggtcagtgccccccacCCCCAGGGAGAACGACATACAAAca
aaatctactcaaaattTACTGTCCCTTCTTAAAACTTTGTTCAGAGCGAT
GATGCAGTATATACTccatcccactgaattttccgacTTGAACGCAAAAC
TATTGAAATTCCCacccataaaaaatatgggaatattaaTCCCAATCGAG
CTTCAGTCAgttatttttattcccactggcttaaaaaatcctaccgggtc
tacGAGAAGGGGGTATAAGGAAAGATAAAACCGGGTTCAAAGACTTACAC
TTTAAGTCAAGCCTATAGTATAAAAGGTCAACTCTGGTCAAGGGAAGTTT
TCATCAGATCCTAGGCTATTCCTTAGACTTCATAGACAAATAGAGAAATG
TAAAACTACTAGTAGTGATTCTAGTCAGCataaaaacaaggaattttTAA
TAAGCCATGCTAATAAGCTAATAAGATTTTAATCttaatatgttttgaaa
attcatatcgaaaattaaaaaacagaTTTGATAACAAGAATTCGATAAAA
ATACCATAAAAGGCGAAATAACGTTTCCTTCTTGATCTCTGCAAAAAAAG
GGGAAGTGGCAATAAGTCCTCGCATATTCAGCGTAATTAAAATATCTATT
ATCGAAACCAATTATTCCTTTATAAACTGCCCAAATTTATGCCATTGACT
GTGATCAGGACCTGATTGTTTTCTGTGATcgaaattttagaatatttcga
aatgaaaataat Run BLAST on NCBI transcript from alignment at sc0000434:36214..37667+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022808 ID=TCONS_00022808|Name=TCONS_00022808|organism=Clytia hemisphaerica|type=transcript|length=1454bp|location=Sequence derived from alignment at sc0000434:36214..37667+ (Clytia hemisphaerica)
AAAAGATAATGCTCGTTAATTGTTGTATATGGGATTTACTGCGATAAAAT
CTTTTTCGCGAACTCACGACGAAGGGGATAAAGAGTAATTGGCGAAATAA
AAAATTCAGTACAGATAATCCATTTGTCCATCTGATGAATATAAAAAGTT
AAAGTTGTttcataaaataataaataacaCTCAAAACGTACCAAACATTA
TACAAAACCATAATGGATATAAATGACCTTCTATTTATTTACATCATTTT
GTACATGTATCAAAGCTAGGTATGatttaaaatattcttcaaattaTATT
AGGAATAAATATTCTCAACCCCCTTTTACCCTCTTGACCAGACGCGTGta
ctttttccaaaaacattCACTTagggggatacttaggcaaaattaggTAC
GGGGGACGTGCCGTTGATCAAGGTCCCTTTTCTAGGCTATttgatatctg
acagggtccaaaaTttactaattttcaagatgtggaCCTGCTGACAGGGT
CAATTTTTGGTcgttttggacaattttcagggtgaaaattagaaagtttt
tgattttcgtcTACTTTAAATCCTTTATGCTACTTTTCAGGGTTAAAGTG
GGcaaatttttcgttctgaaaaagtccaaaatttaaaaaacattcatatc
tgacagggtccacgtttcaaactccagcggcacatccccgtcagccgtca
aggtcagtgccccccacCCCCAGGGAGAACGACATACAAAcaaaatctac
tcaaaattTACTGTCCCTTCTTAAAACTTTGTTCAGAGCGATGATGCAGT
ATATACTccatcccactgaattttccgacTTGAACGCAAAACTATTGAAA
TTCCCacccataaaaaatatgggaatattaaTCCCAATCGAGCTTCAGTC
AgttatttttattcccactggcttaaaaaatcctaccgggtctacGAGAA
GGGGGTATAAGGAAAGATAAAACCGGGTTCAAAGACTTACACTTTAAGTC
AAGCCTATAGTATAAAAGGTCAACTCTGGTCAAGGGAAGTTTTCATCAGA
TCCTAGGCTATTCCTTAGACTTCATAGACAAATAGAGAAATGTAAAACTA
CTAGTAGTGATTCTAGTCAGCataaaaacaaggaattttTAATAAGCCAT
GCTAATAAGCTAATAAGATTTTAATCttaatatgttttgaaaattcatat
cgaaaattaaaaaacagaTTTGATAACAAGAATTCGATAAAAATACCATA
AAAGGCGAAATAACGTTTCCTTCTTGATCTCTGCAAAAAAAGGGGAAGTG
GCAATAAGTCCTCGCATATTCAGCGTAATTAAAATATCTATTATCGAAAC
CAATTATTCCTTTATAAACTGCCCAAATTTATGCCATTGACTGTGATCAG
GACCTGATTGTTTTCTGTGATcgaaattttagaatatttcgaaatgaaaa
taat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022808-exon-sc0000434-1491911889:36214..36735 | TCONS_00022808-exon-sc0000434-1491911889:36214..36735 | Clytia hemisphaerica | exon |
| TCONS_00022808-exon-sc0000434-1510915933:36214..36735 | TCONS_00022808-exon-sc0000434-1510915933:36214..36735 | Clytia hemisphaerica | exon |
| TCONS_00022808-exon-sc0000434-1575043694:36214..36735 | TCONS_00022808-exon-sc0000434-1575043694:36214..36735 | Clytia hemisphaerica | exon |
| TCONS_00022808-exon-sc0000434-1491911889:36778..37667 | TCONS_00022808-exon-sc0000434-1491911889:36778..37667 | Clytia hemisphaerica | exon |
| TCONS_00022808-exon-sc0000434-1510915933:36778..37667 | TCONS_00022808-exon-sc0000434-1510915933:36778..37667 | Clytia hemisphaerica | exon |
| TCONS_00022808-exon-sc0000434-1575043694:36778..37667 | TCONS_00022808-exon-sc0000434-1575043694:36778..37667 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000434 | supercontig | sc0000434:36214..37667 + |
Blast
The following BLAST results are available for this feature:
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