TCONS_00022803 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022803
Unique NameTCONS_00022803
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length368

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022803 ID=TCONS_00022803|Name=TCONS_00022803|organism=Clytia hemisphaerica|type=transcript|length=368bp
tacgtaatgacaaagaaaaaagagggagagcttaaaatacaattttgtga
atacacacttaaaactttctactcaatcgcatgttcaaattcgatacttt
tattagggacaccctgtagatgGCAGCTTATATTATTTACACGCAAATGA
TTTTTATGTCTCGTAGTGTGTCGTTTTTTTCAGTAATGGGTACAAGTAGC
TTTGAACAATTTAGCATTTAGCATTGTAAGCACTTATCTTGGAGGTAGTA
TTAGGCATCAACTTAACTAATGGGGTAGACTATTATTTATTTGTACGGGG
AAAATTTTATTGTAGGATTTCTTTCTTGAAACtagattttgattgaattt
caaCTGTATGTAAGGGAT
Run BLAST on NCBI

transcript from alignment at sc0000432:215165..215532

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022803 ID=TCONS_00022803|Name=TCONS_00022803|organism=Clytia hemisphaerica|type=transcript|length=368bp|location=Sequence derived from alignment at sc0000432:215165..215532 (Clytia hemisphaerica)
ATCCCTTACATACAGttgaaattcaatcaaaatctaGTTTCAAGAAAGAA
ATCCTACAATAAAATTTTCCCCGTACAAATAAATAATAGTCTACCCCATT
AGTTAAGTTGATGCCTAATACTACCTCCAAGATAAGTGCTTACAATGCTA
AATGCTAAATTGTTCAAAGCTACTTGTACCCATTACTGAAAAAAACGACA
CACTACGAGACATAAAAATCATTTGCGTGTAAATAATATAAGCTGCcatc
tacagggtgtccctaataaaagtatcgaatttgaacatgcgattgagtag
aaagttttaagtgtgtattcacaaaattgtattttaagctctccctcttt
tttctttgtcattacgta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012816XLOC_012816Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022803-exon-sc0000432-1491911889:215165..215532TCONS_00022803-exon-sc0000432-1491911889:215165..215532Clytia hemisphaericaexon
TCONS_00022803-exon-sc0000432-1510915933:215165..215532TCONS_00022803-exon-sc0000432-1510915933:215165..215532Clytia hemisphaericaexon
TCONS_00022803-exon-sc0000432-1575043694:215165..215532TCONS_00022803-exon-sc0000432-1575043694:215165..215532Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000432supercontigsc0000432:215165..215532 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.102	3.31281	0.860366	2.00773	2.8101	0.508717	1.49808	1.58709	2.24971	0.547848	0	0.649258	10.4861	3.19875	22.7695	18.4194	0.861668	1.19647	13.2665	10.8762	0.294131	0	1.3793	1.95288	0.246595	0.320245	1.39907	4.52265	0.481808	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022803 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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